Gene annotation
Transcriptome id Sobic.010G129600.1
Synonym DSPTP1E, Sb10g011780, IBR5
Functional annotation dual specificity protein phosphatase, putative, expressed
UniProt C5Z1K6
Pfam PF00782
Panther DB PTHR10159 PTHR10159:SF331
NCBI CDD KOG1716; Dual specificity phosphatase
KEGG Orthology K04459; DUSP, dual specificity MAP kinase phosphatase
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation


Orthologs (automatic annotation)
TAIR AT2G04550 : indole-3-butyric acid response 5
RAP-DB (Rice) LOC_Os06g20340.1 : dual specificity protein phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a021834 , Zm00025a042789
Brachypodium KQK18488 , PNT69319
Barley HORVU6Hr1G071120.10 , HORVU7Hr1G045710.6 , HORVU7Hr1G045710.7 , HORVU7Hr1G045710.4 , HORVU7Hr1G045710.5 , HORVU7Hr1G045710.2 , HORVU7Hr1G045710.3 , HORVU7Hr1G045710.1 , HORVU7Hr1G045710.8 , HORVU7Hr1G045710.9 , HORVU6Hr1G071120.7 , HORVU6Hr1G071120.6 , HORVU6Hr1G071120.5 , HORVU6Hr1G071120.4 , HORVU6Hr1G071120.3 , HORVU6Hr1G071120.2 , HORVU6Hr1G071120.1 , HORVU6Hr1G071120.9 , HORVU6Hr1G071120.8
Wheat TraesCS6A02G283000 , TraesCS6D02G263500 , TraesCS7A02G223000 , TraesCS7D02G224700 , TraesCS7B02G129500 , TraesCS7B02G129500
Populus -


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cDNA sequences
Sobic.010G129600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
2 Sobic.001G161900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
3 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
4 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
5 Sobic.004G091200 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
6 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
7 Sobic.009G160600 Yip1 domain containing protein, expressed -
8 Sobic.006G237900 UBA/TS-N domain containing protein, expressed -
9 Sobic.008G061100 expressed protein -
10 Sobic.001G085900 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
11 Sobic.003G053800 WD40-like domain containing protein, putative, expressed -
12 Sobic.003G436300 expressed protein -
13 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
14 Sobic.001G279100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CW7, putative, expressed -
15 Sobic.004G237400 cullin, putative, expressed K03869: cullin 3
16 Sobic.003G005200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
17 Sobic.007G205900 uvrB/uvrC motif family protein, expressed -
18 Sobic.006G115466 - -
19 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
20 Sobic.004G323700 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic010G129600 Sobic010G129600 Sobic001G005600 Sobic001G005600 Sobic010G129600--Sobic001G005600 Sobic001G161900 Sobic001G161900 Sobic010G129600--Sobic001G161900 Sobic001G313500 Sobic001G313500 Sobic010G129600--Sobic001G313500 Sobic006G271200 Sobic006G271200 Sobic010G129600--Sobic006G271200 Sobic004G091200 Sobic004G091200 Sobic010G129600--Sobic004G091200 Sobic010G261600 Sobic010G261600 Sobic010G129600--Sobic010G261600 Sobic009G160600 Sobic009G160600 Sobic010G129600--Sobic009G160600 Sobic006G237900 Sobic006G237900 Sobic010G129600--Sobic006G237900 Sobic008G061100 Sobic008G061100 Sobic010G129600--Sobic008G061100 Sobic001G005600--Sobic009G160600 Sobic001G005600--Sobic010G129600 Sobic007G042900 Sobic007G042900 Sobic001G005600--Sobic007G042900 Sobic008G140400 Sobic008G140400 Sobic001G005600--Sobic008G140400 Sobic003G150900 Sobic003G150900 Sobic001G005600--Sobic003G150900 Sobic004G323700 Sobic004G323700 Sobic001G005600--Sobic004G323700 Sobic004G068500 Sobic004G068500 Sobic001G005600--Sobic004G068500 Sobic008G021000 Sobic008G021000 Sobic001G005600--Sobic008G021000 Sobic001G005600--Sobic001G161900 Sobic001G161900--Sobic009G160600 Sobic001G161900--Sobic010G129600 Sobic001G421400 Sobic001G421400 Sobic001G161900--Sobic001G421400 Sobic001G161900--Sobic001G005600 Sobic001G161900--Sobic010G261600 Sobic001G161900--Sobic001G313500 Sobic003G053800 Sobic003G053800 Sobic001G161900--Sobic003G053800 Sobic010G243400 Sobic010G243400 Sobic001G161900--Sobic010G243400 Sobic001G512400 Sobic001G512400 Sobic001G161900--Sobic001G512400 Sobic001G313500--Sobic001G421400 Sobic001G313500--Sobic001G512400 Sobic001G085900 Sobic001G085900 Sobic001G313500--Sobic001G085900 Sobic002G385900 Sobic002G385900 Sobic001G313500--Sobic002G385900 Sobic001G313500--Sobic001G161900 Sobic001G313500--Sobic010G129600 Sobic009G135600 Sobic009G135600 Sobic001G313500--Sobic009G135600 Sobic001G313500--Sobic010G261600 Sobic004G039300 Sobic004G039300 Sobic001G313500--Sobic004G039300 Sobic001G003000 Sobic001G003000 Sobic006G271200--Sobic001G003000 Sobic006G271200--Sobic006G237900 Sobic009G126900 Sobic009G126900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic010G043400 Sobic010G043400 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic006G271200--Sobic010G072800 Sobic009G258400 Sobic009G258400 Sobic004G091200--Sobic009G258400 Sobic004G091200--Sobic001G005600 Sobic003G005200 Sobic003G005200 Sobic004G091200--Sobic003G005200 Sobic004G091200--Sobic010G129600 Sobic001G473600 Sobic001G473600 Sobic004G091200--Sobic001G473600 Sobic001G114500 Sobic001G114500 Sobic004G091200--Sobic001G114500 Sobic002G105200 Sobic002G105200 Sobic004G091200--Sobic002G105200 Sobic003G201900 Sobic003G201900 Sobic004G091200--Sobic003G201900 Sobic003G038600 Sobic003G038600 Sobic004G091200--Sobic003G038600 Sobic003G338500 Sobic003G338500 Sobic010G261600--Sobic003G338500 Sobic002G303600 Sobic002G303600 Sobic010G261600--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic010G261600--Sobic002G008800 Sobic004G228800 Sobic004G228800 Sobic010G261600--Sobic004G228800 Sobic010G261600--Sobic004G323700 Sobic002G262900 Sobic002G262900 Sobic010G261600--Sobic002G262900 Sobic009G228700 Sobic009G228700 Sobic010G261600--Sobic009G228700 Sobic004G275700 Sobic004G275700 Sobic010G261600--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic010G261600--Sobic010G020400 Sobic009G160600--Sobic001G005600 Sobic009G160600--Sobic001G161900 Sobic003G382900 Sobic003G382900 Sobic009G160600--Sobic003G382900 Sobic009G160600--Sobic004G323700 Sobic009G160600--Sobic003G005200 Sobic009G160600--Sobic003G150900 Sobic009G160600--Sobic010G129600 Sobic007G056500 Sobic007G056500 Sobic009G160600--Sobic007G056500 Sobic001G042200 Sobic001G042200 Sobic009G160600--Sobic001G042200 Sobic006G237900--Sobic006G271200 Sobic006G237900--Sobic004G351300 Sobic006G237900--Sobic001G003000 Sobic005G059600 Sobic005G059600 Sobic006G237900--Sobic005G059600 Sobic006G237900--Sobic010G129600 Sobic006G237900--Sobic010G130200 Sobic006G237900--Sobic010G043400 Sobic006G237900--Sobic001G089800 Sobic006G237900--Sobic001G436900 Sobic001G279100 Sobic001G279100 Sobic008G061100--Sobic001G279100 Sobic008G061100--Sobic010G129600 Sobic003G304200 Sobic003G304200 Sobic008G061100--Sobic003G304200 Sobic008G061100--Sobic006G237900 Sobic008G061100--Sobic006G271200 Sobic001G298300 Sobic001G298300 Sobic008G061100--Sobic001G298300 Sobic008G186200 Sobic008G186200 Sobic008G061100--Sobic008G186200 Sobic006G115466 Sobic006G115466 Sobic008G061100--Sobic006G115466 Sobic008G061100--Sobic001G436900
Octagon: transcription factors


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