Gene annotation
Transcriptome id Sobic.001G279100.8,Sobic.001G279100.6,Sobic.001G279100.7,Sobic.001G279100.5
Synonym CW7, Sb01g027460
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
CW7, putative, expressed
UniProt A0A1Z5S802 , A0A1Z5S875 , A0A1Z5S871 , A0A1Z5S7Z3
Pfam PF09741
Panther DB PTHR21477 PTHR21477:SF13
NCBI CDD KOG2465; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G59520 : CW7
RAP-DB (Rice) LOC_Os04g10420.1 : CW7, putative, expressed
MaizeGDB (Corn) Zm00025a003617
Brachypodium KQJ92360 , KQJ92361 , KQJ92359 , KQJ92358 , KQJ92357 , KQJ96203 , KQJ96207 , KQJ96206 , KQJ96205 , KQJ96204 , PNT65485 , PNT65484 , PNT65483 , PNT65482 , PNT65481 , PNT65480
Barley -
Wheat TraesCS2D02G149700 , TraesCS2B02G083900 , TraesCS2B02G083900 , TraesCS2B02G083900 , TraesCS7D02G534600 , TraesCS2D02G069400 , TraesCS2A02G070400 , TraesCS2A02G070400
Populus PNT02431 , PNT02430 , PNT02433 , PNT02432 , PNT02434


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cDNA sequences
Sobic.001G279100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G382600 expressed protein -
2 Sobic.008G061100 expressed protein -
3 Sobic.002G314900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
5 Sobic.001G517500 Ubiquitin family domain containing protein, expressed K04523: UBQLN, ubiquilin
6 Sobic.010G129600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
7 Sobic.006G115466 - -
8 Sobic.007G046200 ELF7, putative, expressed K15174: RNA polymerase II-associated factor 1
9 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
10 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
11 Sobic.004G237400 cullin, putative, expressed K03869: cullin 3
12 Sobic.001G321000 oxidoreductase, putative, expressed -
13 Sobic.003G195500 SEY1, putative, expressed -
14 Sobic.006G004500 arginase, putative, expressed K01476: E3.5.3.1, rocF, arginase
15 Sobic.003G304200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
16 Sobic.007G028100 WD repeat-containing protein, putative, expressed -
17 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
18 Sobic.003G356400 expressed protein -
19 Sobic.009G148300 expressed protein -
20 Sobic.004G041200 expressed protein -


Gene co-expression network
sample Sobic001G279100 Sobic001G279100 Sobic002G382600 Sobic002G382600 Sobic001G279100--Sobic002G382600 Sobic008G061100 Sobic008G061100 Sobic001G279100--Sobic008G061100 Sobic002G314900 Sobic002G314900 Sobic001G279100--Sobic002G314900 Sobic007G119200 Sobic007G119200 Sobic001G279100--Sobic007G119200 Sobic001G517500 Sobic001G517500 Sobic001G279100--Sobic001G517500 Sobic010G129600 Sobic010G129600 Sobic001G279100--Sobic010G129600 Sobic006G115466 Sobic006G115466 Sobic001G279100--Sobic006G115466 Sobic007G046200 Sobic007G046200 Sobic001G279100--Sobic007G046200 Sobic001G436900 Sobic001G436900 Sobic001G279100--Sobic001G436900 Sobic002G105200 Sobic002G105200 Sobic002G382600--Sobic002G105200 Sobic010G167900 Sobic010G167900 Sobic002G382600--Sobic010G167900 Sobic009G113000 Sobic009G113000 Sobic002G382600--Sobic009G113000 Sobic004G237400 Sobic004G237400 Sobic002G382600--Sobic004G237400 Sobic010G264200 Sobic010G264200 Sobic002G382600--Sobic010G264200 Sobic004G331100 Sobic004G331100 Sobic002G382600--Sobic004G331100 Sobic002G382600--Sobic001G279100 Sobic001G109800 Sobic001G109800 Sobic002G382600--Sobic001G109800 Sobic002G382600--Sobic001G436900 Sobic008G061100--Sobic001G279100 Sobic008G061100--Sobic010G129600 Sobic003G304200 Sobic003G304200 Sobic008G061100--Sobic003G304200 Sobic006G237900 Sobic006G237900 Sobic008G061100--Sobic006G237900 Sobic006G271200 Sobic006G271200 Sobic008G061100--Sobic006G271200 Sobic001G298300 Sobic001G298300 Sobic008G061100--Sobic001G298300 Sobic008G186200 Sobic008G186200 Sobic008G061100--Sobic008G186200 Sobic008G061100--Sobic006G115466 Sobic008G061100--Sobic001G436900 Sobic007G028100 Sobic007G028100 Sobic002G314900--Sobic007G028100 Sobic002G314900--Sobic001G279100 Sobic001G005600 Sobic001G005600 Sobic002G314900--Sobic001G005600 Sobic003G146900 Sobic003G146900 Sobic002G314900--Sobic003G146900 Sobic002G314900--Sobic006G115466 Sobic004G091200 Sobic004G091200 Sobic002G314900--Sobic004G091200 Sobic002G314900--Sobic010G129600 Sobic001G135500 Sobic001G135500 Sobic002G314900--Sobic001G135500 Sobic002G314900--Sobic001G517500 Sobic002G034600 Sobic002G034600 Sobic007G119200--Sobic002G034600 Sobic004G146500 Sobic004G146500 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic010G069100 Sobic010G069100 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic002G264200 Sobic002G264200 Sobic007G119200--Sobic002G264200 Sobic001G088100 Sobic001G088100 Sobic007G119200--Sobic001G088100 Sobic003G355000 Sobic003G355000 Sobic001G517500--Sobic003G355000 Sobic001G517500--Sobic007G119200 Sobic001G517500--Sobic007G046200 Sobic003G397800 Sobic003G397800 Sobic001G517500--Sobic003G397800 Sobic003G073000 Sobic003G073000 Sobic001G517500--Sobic003G073000 Sobic001G517500--Sobic002G034600 Sobic002G353600 Sobic002G353600 Sobic001G517500--Sobic002G353600 Sobic001G517500--Sobic004G146500 Sobic001G408700 Sobic001G408700 Sobic001G517500--Sobic001G408700 Sobic010G129600--Sobic001G005600 Sobic001G161900 Sobic001G161900 Sobic010G129600--Sobic001G161900 Sobic001G313500 Sobic001G313500 Sobic010G129600--Sobic001G313500 Sobic010G129600--Sobic006G271200 Sobic010G129600--Sobic004G091200 Sobic010G261600 Sobic010G261600 Sobic010G129600--Sobic010G261600 Sobic009G160600 Sobic009G160600 Sobic010G129600--Sobic009G160600 Sobic010G129600--Sobic006G237900 Sobic010G129600--Sobic008G061100 Sobic006G115466--Sobic001G298300 Sobic006G115466--Sobic002G314900 Sobic006G115466--Sobic007G028100 Sobic006G115466--Sobic001G279100 Sobic006G115466--Sobic010G129600 Sobic006G115466--Sobic001G436900 Sobic006G115466--Sobic008G061100 Sobic004G349800 Sobic004G349800 Sobic006G115466--Sobic004G349800 Sobic006G004500 Sobic006G004500 Sobic006G115466--Sobic006G004500 Sobic007G046200--Sobic001G517500 Sobic001G473600 Sobic001G473600 Sobic007G046200--Sobic001G473600 Sobic007G046200--Sobic002G034600 Sobic007G046200--Sobic007G119200 Sobic007G111100 Sobic007G111100 Sobic007G046200--Sobic007G111100 Sobic007G046200--Sobic003G355000 Sobic010G202600 Sobic010G202600 Sobic007G046200--Sobic010G202600 Sobic007G046200--Sobic001G109800 Sobic003G081000 Sobic003G081000 Sobic007G046200--Sobic003G081000 Sobic001G436900--Sobic004G331100 Sobic003G320700 Sobic003G320700 Sobic001G436900--Sobic003G320700 Sobic004G065000 Sobic004G065000 Sobic001G436900--Sobic004G065000 Sobic001G436900--Sobic006G271200 Sobic006G204900 Sobic006G204900 Sobic001G436900--Sobic006G204900 Sobic007G075400 Sobic007G075400 Sobic001G436900--Sobic007G075400 Sobic001G436900--Sobic009G113000 Sobic001G436900--Sobic002G382600 Sobic001G436900--Sobic010G264200
Octagon: transcription factors


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