Gene annotation
Transcriptome id Sobic.004G041200.1
Synonym Sb04g003580
Functional annotation expressed protein
UniProt A0A194YMP3
Pfam -
Panther DB PTHR35723 PTHR35723:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45320 : -
RAP-DB (Rice) LOC_Os06g37430.2 : expressed protein
MaizeGDB (Corn) Zm00025a033282
Brachypodium KQK17904 , KQK17903
Barley HORVU7Hr1G087130.8 , HORVU7Hr1G087130.9 , HORVU7Hr1G087130.4 , HORVU7Hr1G087130.6 , HORVU7Hr1G087130.7 , HORVU7Hr1G087130.1 , HORVU7Hr1G087130.2 , HORVU7Hr1G087130.3 , HORVU7Hr1G087130.12 , HORVU7Hr1G087130.10 , HORVU7Hr1G087130.11 , HORVU1Hr1G037820.2 , HORVU1Hr1G037820.1 , HORVU7Hr1G087130.13 , HORVU0Hr1G021780.1 , HORVU0Hr1G021780.2 , HORVU0Hr1G021780.3 , HORVU0Hr1G021780.4
Wheat TraesCS7A02G362700 , TraesCS7D02G360400 , TraesCS7D02G360400 , TraesCS7A02G362700 , TraesCS7B02G266100 , TraesCS7B02G266100
Populus -


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cDNA sequences
Sobic.004G041200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
2 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
3 Sobic.004G237400 cullin, putative, expressed K03869: cullin 3
4 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
5 Sobic.009G255600 cleavage and polyadenylation specificity factor, putative, expressed K10610: DNA damage-binding protein 1
6 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
7 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
8 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
9 Sobic.009G143800 - K14806: DDX31, ATP-dependent RNA helicase DDX31/DBP7
10 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
11 Sobic.006G148100 DUF647 domain containing protein, putative, expressed -
12 Sobic.002G361400 frigida, putative, expressed -
13 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
14 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
15 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
16 Sobic.006G200700 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
17 Sobic.010G186600 expressed protein -
18 Sobic.007G009700 nucleic acid binding protein, putative, expressed K12839: SMNDC1, survival of motor neuron-related-splicing factor 30
19 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
20 Sobic.002G371300 peroxisome assembly protein, putative, expressed K13346: peroxin-10


Gene co-expression network
sample Sobic004G041200 Sobic004G041200 Sobic004G353000 Sobic004G353000 Sobic004G041200--Sobic004G353000 Sobic003G132000 Sobic003G132000 Sobic004G041200--Sobic003G132000 Sobic004G237400 Sobic004G237400 Sobic004G041200--Sobic004G237400 Sobic009G258400 Sobic009G258400 Sobic004G041200--Sobic009G258400 Sobic009G255600 Sobic009G255600 Sobic004G041200--Sobic009G255600 Sobic010G118000 Sobic010G118000 Sobic004G041200--Sobic010G118000 Sobic008G103300 Sobic008G103300 Sobic004G041200--Sobic008G103300 Sobic001G473600 Sobic001G473600 Sobic004G041200--Sobic001G473600 Sobic009G143800 Sobic009G143800 Sobic004G041200--Sobic009G143800 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic001G114500 Sobic001G114500 Sobic003G132000--Sobic001G114500 Sobic006G270600 Sobic006G270600 Sobic003G132000--Sobic006G270600 Sobic003G046300 Sobic003G046300 Sobic003G132000--Sobic003G046300 Sobic003G132000--Sobic008G103300 Sobic001G487100 Sobic001G487100 Sobic003G132000--Sobic001G487100 Sobic004G192900 Sobic004G192900 Sobic003G132000--Sobic004G192900 Sobic009G164000 Sobic009G164000 Sobic003G132000--Sobic009G164000 Sobic003G132000--Sobic002G371700 Sobic003G363700 Sobic003G363700 Sobic003G132000--Sobic003G363700 Sobic002G105200 Sobic002G105200 Sobic004G237400--Sobic002G105200 Sobic009G113000 Sobic009G113000 Sobic004G237400--Sobic009G113000 Sobic003G352200 Sobic003G352200 Sobic004G237400--Sobic003G352200 Sobic002G382600 Sobic002G382600 Sobic004G237400--Sobic002G382600 Sobic006G115600 Sobic006G115600 Sobic004G237400--Sobic006G115600 Sobic006G004500 Sobic006G004500 Sobic004G237400--Sobic006G004500 Sobic004G264400 Sobic004G264400 Sobic004G237400--Sobic004G264400 Sobic010G164000 Sobic010G164000 Sobic004G237400--Sobic010G164000 Sobic004G237400--Sobic001G473600 Sobic001G168900 Sobic001G168900 Sobic009G258400--Sobic001G168900 Sobic006G120800 Sobic006G120800 Sobic009G258400--Sobic006G120800 Sobic004G091200 Sobic004G091200 Sobic009G258400--Sobic004G091200 Sobic009G258400--Sobic001G114500 Sobic009G036200 Sobic009G036200 Sobic009G258400--Sobic009G036200 Sobic002G077900 Sobic002G077900 Sobic009G258400--Sobic002G077900 Sobic009G258400--Sobic001G291800 Sobic009G258400--Sobic003G132000 Sobic001G507400 Sobic001G507400 Sobic009G258400--Sobic001G507400 Sobic010G186600 Sobic010G186600 Sobic009G255600--Sobic010G186600 Sobic003G416700 Sobic003G416700 Sobic009G255600--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic009G255600--Sobic003G214600 Sobic005G200800 Sobic005G200800 Sobic009G255600--Sobic005G200800 Sobic009G119000 Sobic009G119000 Sobic009G255600--Sobic009G119000 Sobic002G029100 Sobic002G029100 Sobic009G255600--Sobic002G029100 Sobic003G042400 Sobic003G042400 Sobic009G255600--Sobic003G042400 Sobic009G255600--Sobic001G291800 Sobic003G360400 Sobic003G360400 Sobic009G255600--Sobic003G360400 Sobic010G118000--Sobic002G371300 Sobic006G148100 Sobic006G148100 Sobic010G118000--Sobic006G148100 Sobic010G118000--Sobic009G255600 Sobic003G266001 Sobic003G266001 Sobic010G118000--Sobic003G266001 Sobic010G266500 Sobic010G266500 Sobic010G118000--Sobic010G266500 Sobic010G118000--Sobic009G143800 Sobic010G118000--Sobic004G353000 Sobic007G225100 Sobic007G225100 Sobic010G118000--Sobic007G225100 Sobic008G014500 Sobic008G014500 Sobic010G118000--Sobic008G014500 Sobic008G055900 Sobic008G055900 Sobic008G103300--Sobic008G055900 Sobic008G103300--Sobic002G371700 Sobic008G103300--Sobic003G046300 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic002G034600 Sobic002G034600 Sobic001G473600--Sobic002G034600 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic009G143800--Sobic004G353000 Sobic001G259000 Sobic001G259000 Sobic009G143800--Sobic001G259000 Sobic004G332400 Sobic004G332400 Sobic009G143800--Sobic004G332400 Sobic009G143800--Sobic008G014500 Sobic009G143800--Sobic010G118000 Sobic009G143800--Sobic006G200700 Sobic008G147200 Sobic008G147200 Sobic009G143800--Sobic008G147200 Sobic008G131000 Sobic008G131000 Sobic009G143800--Sobic008G131000 Sobic009G143800--Sobic001G291800
Octagon: transcription factors


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