Gene annotation
Transcriptome id Sobic.003G356400.2
Synonym Sb03g039870
Functional annotation expressed protein
UniProt A0A1W0W0E8
Pfam -
Panther DB PTHR33738 PTHR33738:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59080 : -
RAP-DB (Rice) LOC_Os01g62970.1 : expressed protein
MaizeGDB (Corn) Zm00025a026851 , Zm00025a039648
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G356400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G279100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CW7, putative, expressed -
2 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
3 Sobic.005G019800 ZF-HD protein dimerisation region containing protein, expressed -
4 Sobic.006G115466 - -
5 Sobic.010G133700 - -
6 Sobic.001G417600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
7 Sobic.005G175200 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.007G194800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
9 Sobic.001G280000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP46 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
10 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
11 Sobic.003G304200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
12 Sobic.008G061100 expressed protein -
13 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
14 Sobic.001G196700 OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed -
15 Sobic.003G036700 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
16 Sobic.003G272600 expressed protein -
17 Sobic.008G109700 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed K18054: 2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase
18 Sobic.008G012400 2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
19 Sobic.001G321000 oxidoreductase, putative, expressed -
20 Sobic.002G314900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G356400 Sobic003G356400 Sobic001G279100 Sobic001G279100 Sobic003G356400--Sobic001G279100 Sobic006G139000 Sobic006G139000 Sobic003G356400--Sobic006G139000 Sobic005G019800 Sobic005G019800 Sobic003G356400--Sobic005G019800 Sobic006G115466 Sobic006G115466 Sobic003G356400--Sobic006G115466 Sobic010G133700 Sobic010G133700 Sobic003G356400--Sobic010G133700 Sobic001G417600 Sobic001G417600 Sobic003G356400--Sobic001G417600 Sobic005G175200 Sobic005G175200 Sobic003G356400--Sobic005G175200 Sobic007G194800 Sobic007G194800 Sobic003G356400--Sobic007G194800 Sobic001G280000 Sobic001G280000 Sobic003G356400--Sobic001G280000 Sobic002G382600 Sobic002G382600 Sobic001G279100--Sobic002G382600 Sobic008G061100 Sobic008G061100 Sobic001G279100--Sobic008G061100 Sobic002G314900 Sobic002G314900 Sobic001G279100--Sobic002G314900 Sobic007G119200 Sobic007G119200 Sobic001G279100--Sobic007G119200 Sobic001G517500 Sobic001G517500 Sobic001G279100--Sobic001G517500 Sobic010G129600 Sobic010G129600 Sobic001G279100--Sobic010G129600 Sobic001G279100--Sobic006G115466 Sobic007G046200 Sobic007G046200 Sobic001G279100--Sobic007G046200 Sobic001G436900 Sobic001G436900 Sobic001G279100--Sobic001G436900 Sobic002G058500 Sobic002G058500 Sobic006G139000--Sobic002G058500 Sobic006G139000--Sobic001G417600 Sobic006G139000--Sobic001G280000 Sobic006G139000--Sobic005G019800 Sobic001G395700 Sobic001G395700 Sobic006G139000--Sobic001G395700 Sobic003G226200 Sobic003G226200 Sobic006G139000--Sobic003G226200 Sobic005G197100 Sobic005G197100 Sobic006G139000--Sobic005G197100 Sobic003G304200 Sobic003G304200 Sobic006G139000--Sobic003G304200 Sobic009G055600 Sobic009G055600 Sobic006G139000--Sobic009G055600 Sobic003G025900 Sobic003G025900 Sobic005G019800--Sobic003G025900 Sobic005G019800--Sobic002G058500 Sobic005G019800--Sobic006G139000 Sobic001G227800 Sobic001G227800 Sobic005G019800--Sobic001G227800 Sobic005G019800--Sobic001G280000 Sobic003G272600 Sobic003G272600 Sobic005G019800--Sobic003G272600 Sobic005G019800--Sobic001G395700 Sobic005G019800--Sobic003G356400 Sobic002G215700 Sobic002G215700 Sobic005G019800--Sobic002G215700 Sobic001G298300 Sobic001G298300 Sobic006G115466--Sobic001G298300 Sobic006G115466--Sobic002G314900 Sobic007G028100 Sobic007G028100 Sobic006G115466--Sobic007G028100 Sobic006G115466--Sobic001G279100 Sobic006G115466--Sobic010G129600 Sobic006G115466--Sobic001G436900 Sobic006G115466--Sobic008G061100 Sobic004G349800 Sobic004G349800 Sobic006G115466--Sobic004G349800 Sobic006G004500 Sobic006G004500 Sobic006G115466--Sobic006G004500 Sobic010G133700--Sobic001G417600 Sobic003G036700 Sobic003G036700 Sobic010G133700--Sobic003G036700 Sobic010G133700--Sobic005G175200 Sobic003G095600 Sobic003G095600 Sobic010G133700--Sobic003G095600 Sobic006G147400 Sobic006G147400 Sobic010G133700--Sobic006G147400 Sobic010G198100 Sobic010G198100 Sobic010G133700--Sobic010G198100 Sobic001G082500 Sobic001G082500 Sobic010G133700--Sobic001G082500 Sobic010G133700--Sobic007G194800 Sobic006G132400 Sobic006G132400 Sobic010G133700--Sobic006G132400 Sobic001G417600--Sobic010G133700 Sobic001G417600--Sobic006G139000 Sobic001G417600--Sobic001G280000 Sobic001G417600--Sobic003G036700 Sobic001G417600--Sobic001G082500 Sobic009G208500 Sobic009G208500 Sobic001G417600--Sobic009G208500 Sobic001G417600--Sobic006G147400 Sobic007G178100 Sobic007G178100 Sobic001G417600--Sobic007G178100 Sobic001G417600--Sobic007G194800 Sobic005G169300 Sobic005G169300 Sobic005G175200--Sobic005G169300 Sobic005G110445 Sobic005G110445 Sobic005G175200--Sobic005G110445 Sobic006G132300 Sobic006G132300 Sobic005G175200--Sobic006G132300 Sobic008G186700 Sobic008G186700 Sobic005G175200--Sobic008G186700 Sobic010G237100 Sobic010G237100 Sobic005G175200--Sobic010G237100 Sobic001G381250 Sobic001G381250 Sobic005G175200--Sobic001G381250 Sobic007G194800--Sobic003G036700 Sobic007G194800--Sobic001G417600 Sobic007G194800--Sobic010G133700 Sobic001G196700 Sobic001G196700 Sobic007G194800--Sobic001G196700 Sobic007G194800--Sobic006G147400 Sobic007G194800--Sobic006G132400 Sobic010G168500 Sobic010G168500 Sobic007G194800--Sobic010G168500 Sobic009G237700 Sobic009G237700 Sobic007G194800--Sobic009G237700 Sobic007G194800--Sobic001G082500 Sobic001G280000--Sobic006G139000 Sobic001G280000--Sobic001G417600 Sobic001G280000--Sobic002G058500 Sobic001G280000--Sobic001G227800 Sobic001G162700 Sobic001G162700 Sobic001G280000--Sobic001G162700 Sobic001G280000--Sobic005G019800 Sobic010G098100 Sobic010G098100 Sobic001G280000--Sobic010G098100 Sobic001G251900 Sobic001G251900 Sobic001G280000--Sobic001G251900 Sobic003G259200 Sobic003G259200 Sobic001G280000--Sobic003G259200
Octagon: transcription factors


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