Gene annotation
Transcriptome id Sobic.001G196700.1
Synonym Sb01g017310
Functional annotation OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed
UniProt C5WW86
Pfam PF05577
Panther DB PTHR11010 PTHR11010:SF42
NCBI CDD KOG2182; Hydrolytic enzymes of the alpha/beta hydrolase fold
KEGG Orthology -
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G36195 : Serine carboxypeptidase S28 family protein
RAP-DB (Rice) LOC_Os10g36760.1 : OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a006343
Brachypodium KQJ97409
Barley HORVU1Hr1G047300.5 , HORVU1Hr1G047300.7 , HORVU1Hr1G047300.6 , HORVU1Hr1G047300.3 , HORVU1Hr1G047300.2 , HORVU1Hr1G047300.4
Wheat TraesCS1B02G202000 , TraesCS1A02G178300 , TraesCS1D02G176800 , TraesCS1D02G176800 , TraesCS1D02G176800
Populus -


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cDNA sequences
Sobic.001G196700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
2 Sobic.001G367700 rhythmically expressed gene 2 protein, putative, expressed -
3 Sobic.010G168500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
4 Sobic.003G376000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
5 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.007G049400 OsFBX381 - F-box domain containing protein, expressed -
7 Sobic.001G112250 - -
8 Sobic.005G112066 - -
9 Sobic.001G253501 - -
10 Sobic.009G245750 - -
11 Sobic.005G140400 - -
12 Sobic.002G077500 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
14 Sobic.008G103066 - -
15 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
16 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -
17 Sobic.005G174900 - -
18 Sobic.002G344900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.006G062700 transferase family protein, putative, expressed -
20 Sobic.009G001600 "kafirin seed storage protein, similar to Beta-kafirin precursor"(PubMedID : 21853065)@PROLM24 - Prolamin precursor, expressed -


Gene co-expression network
sample Sobic001G196700 Sobic001G196700 Sobic006G132400 Sobic006G132400 Sobic001G196700--Sobic006G132400 Sobic001G367700 Sobic001G367700 Sobic001G196700--Sobic001G367700 Sobic010G168500 Sobic010G168500 Sobic001G196700--Sobic010G168500 Sobic003G376000 Sobic003G376000 Sobic001G196700--Sobic003G376000 Sobic002G077600 Sobic002G077600 Sobic001G196700--Sobic002G077600 Sobic007G049400 Sobic007G049400 Sobic001G196700--Sobic007G049400 Sobic001G112250 Sobic001G112250 Sobic001G196700--Sobic001G112250 Sobic005G112066 Sobic005G112066 Sobic001G196700--Sobic005G112066 Sobic001G253501 Sobic001G253501 Sobic001G196700--Sobic001G253501 Sobic006G132400--Sobic001G196700 Sobic006G132400--Sobic003G376000 Sobic008G154400 Sobic008G154400 Sobic006G132400--Sobic008G154400 Sobic006G132400--Sobic005G112066 Sobic007G156300 Sobic007G156300 Sobic006G132400--Sobic007G156300 Sobic002G077500 Sobic002G077500 Sobic006G132400--Sobic002G077500 Sobic006G132400--Sobic007G049400 Sobic001G326000 Sobic001G326000 Sobic006G132400--Sobic001G326000 Sobic010G095300 Sobic010G095300 Sobic006G132400--Sobic010G095300 Sobic001G367700--Sobic001G196700 Sobic003G242200 Sobic003G242200 Sobic001G367700--Sobic003G242200 Sobic005G110445 Sobic005G110445 Sobic001G367700--Sobic005G110445 Sobic001G394100 Sobic001G394100 Sobic001G367700--Sobic001G394100 Sobic005G199300 Sobic005G199300 Sobic001G367700--Sobic005G199300 Sobic003G392500 Sobic003G392500 Sobic001G367700--Sobic003G392500 Sobic009G010000 Sobic009G010000 Sobic001G367700--Sobic009G010000 Sobic009G013400 Sobic009G013400 Sobic001G367700--Sobic009G013400 Sobic010G142300 Sobic010G142300 Sobic001G367700--Sobic010G142300 Sobic008G039700 Sobic008G039700 Sobic010G168500--Sobic008G039700 Sobic009G071600 Sobic009G071600 Sobic010G168500--Sobic009G071600 Sobic007G034900 Sobic007G034900 Sobic010G168500--Sobic007G034900 Sobic001G259250 Sobic001G259250 Sobic010G168500--Sobic001G259250 Sobic005G153200 Sobic005G153200 Sobic010G168500--Sobic005G153200 Sobic010G200200 Sobic010G200200 Sobic010G168500--Sobic010G200200 Sobic004G142000 Sobic004G142000 Sobic010G168500--Sobic004G142000 Sobic001G037800 Sobic001G037800 Sobic010G168500--Sobic001G037800 Sobic002G338600 Sobic002G338600 Sobic010G168500--Sobic002G338600 Sobic010G136300 Sobic010G136300 Sobic003G376000--Sobic010G136300 Sobic010G031600 Sobic010G031600 Sobic003G376000--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic003G376000--Sobic001G277800 Sobic009G009800 Sobic009G009800 Sobic003G376000--Sobic009G009800 Sobic006G096200 Sobic006G096200 Sobic003G376000--Sobic006G096200 Sobic003G376000--Sobic002G077500 Sobic003G376000--Sobic005G112066 Sobic003G376000--Sobic001G326000 Sobic003G376000--Sobic007G049400 Sobic007G070700 Sobic007G070700 Sobic002G077600--Sobic007G070700 Sobic007G083300 Sobic007G083300 Sobic002G077600--Sobic007G083300 Sobic002G077600--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic002G077600--Sobic009G245750 Sobic003G247700 Sobic003G247700 Sobic002G077600--Sobic003G247700 Sobic002G077600--Sobic001G112250 Sobic009G001600 Sobic009G001600 Sobic002G077600--Sobic009G001600 Sobic002G211700 Sobic002G211700 Sobic002G077600--Sobic002G211700 Sobic002G077600--Sobic007G049400 Sobic007G049400--Sobic005G112066 Sobic007G049400--Sobic002G077500 Sobic007G049400--Sobic002G077600 Sobic007G049400--Sobic001G253501 Sobic007G049400--Sobic009G245750 Sobic005G140400 Sobic005G140400 Sobic007G049400--Sobic005G140400 Sobic007G049400--Sobic007G070700 Sobic007G049400--Sobic007G083300 Sobic007G049400--Sobic001G112250 Sobic008G103066 Sobic008G103066 Sobic001G112250--Sobic008G103066 Sobic001G112250--Sobic001G253501 Sobic001G112250--Sobic009G245750 Sobic001G112250--Sobic002G077600 Sobic001G112250--Sobic007G070700 Sobic001G112250--Sobic009G001600 Sobic001G112250--Sobic003G247700 Sobic001G112250--Sobic002G211700 Sobic001G535900 Sobic001G535900 Sobic001G112250--Sobic001G535900 Sobic005G112066--Sobic002G077500 Sobic005G112066--Sobic007G049400 Sobic005G112066--Sobic001G326000 Sobic005G112066--Sobic005G140400 Sobic002G091800 Sobic002G091800 Sobic005G112066--Sobic002G091800 Sobic009G186400 Sobic009G186400 Sobic005G112066--Sobic009G186400 Sobic005G112066--Sobic007G156300 Sobic002G344900 Sobic002G344900 Sobic005G112066--Sobic002G344900 Sobic006G031600 Sobic006G031600 Sobic005G112066--Sobic006G031600 Sobic001G253501--Sobic009G245750 Sobic001G253501--Sobic003G247700 Sobic001G253501--Sobic009G001600 Sobic001G253501--Sobic002G077600 Sobic001G253501--Sobic007G070700 Sobic001G253501--Sobic001G112250 Sobic001G253501--Sobic002G211700 Sobic001G253501--Sobic008G103066 Sobic001G253501--Sobic007G049400
Octagon: transcription factors


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