Gene annotation
Transcriptome id Sobic.003G036700.1
Synonym CKX4, Sb03g003280, ATCKX4
Functional annotation cytokinin dehydrogenase precursor, putative, expressed
UniProt A0A1B6Q148
Pfam PF01565 PF09265
Panther DB PTHR13878 PTHR13878:SF42
NCBI CDD KOG1231; Proteins containing the FAD binding domain
KEGG Orthology K00279; cytokinin dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0009690cytokinin metabolic process


Orthologs (automatic annotation)
TAIR AT4G29740 : cytokinin oxidase 4
RAP-DB (Rice) LOC_Os01g09260.1 : cytokinin dehydrogenase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023068 , Zm00025a027334
Brachypodium KQK03096
Barley HORVU3Hr1G019850.1 , HORVU3Hr1G019850.2 , HORVU3Hr1G019850.3
Wheat TraesCS3B02G344600 , TraesCS3D02G310200 , TraesCS3B02G128700 , TraesCS3A02G109500 , TraesCS3D02G111300
Populus -


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cDNA sequences
Sobic.003G036700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G133700 - -
2 Sobic.001G196700 OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed -
3 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
4 Sobic.003G095600 glycosyltransferase, putative, expressed -
5 Sobic.010G168500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
6 Sobic.001G417600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
7 Sobic.001G082500 cytochrome P450, putative, expressed -
8 Sobic.003G376000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
9 Sobic.006G147400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@A NAC transcription factor controlling cell collapse and secondary cell wall composition in the stem(PubMedID : 30309900)@We identified D as a single gene encoding a NAC transcription factor that controls the expression of genes involved in plant PCD (programmed cell death).(PubMedID : 30150370)@"we apply fine-mapping and genome-wide association study (GWAS) to identify a candidate gene underlying D, and use nearly isogenic lines (NILs) to characterize the transcriptional, compositional, and agronomic effects of variation at the D locus."(PubMedID : 31245734)@no apical meristem protein, putative, expressed -
10 Sobic.007G194800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
11 Sobic.005G175200 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.008G154400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.001G277800 transferase family protein, putative, expressed -
14 Sobic.006G244500 nuclease PA3, putative, expressed -
15 Sobic.009G009800 expressed protein -
16 Sobic.005G003750 - -
17 Sobic.010G031600 early nodulin 93 ENOD93 protein, putative, expressed -
18 Sobic.009G245750 - -
19 Sobic.001G253501 - -
20 Sobic.009G025100 transporter, putative, expressed -


Gene co-expression network
sample Sobic003G036700 Sobic003G036700 Sobic010G133700 Sobic010G133700 Sobic003G036700--Sobic010G133700 Sobic001G196700 Sobic001G196700 Sobic003G036700--Sobic001G196700 Sobic006G132400 Sobic006G132400 Sobic003G036700--Sobic006G132400 Sobic003G095600 Sobic003G095600 Sobic003G036700--Sobic003G095600 Sobic010G168500 Sobic010G168500 Sobic003G036700--Sobic010G168500 Sobic001G417600 Sobic001G417600 Sobic003G036700--Sobic001G417600 Sobic001G082500 Sobic001G082500 Sobic003G036700--Sobic001G082500 Sobic003G376000 Sobic003G376000 Sobic003G036700--Sobic003G376000 Sobic006G147400 Sobic006G147400 Sobic003G036700--Sobic006G147400 Sobic010G133700--Sobic001G417600 Sobic010G133700--Sobic003G036700 Sobic005G175200 Sobic005G175200 Sobic010G133700--Sobic005G175200 Sobic010G133700--Sobic003G095600 Sobic010G133700--Sobic006G147400 Sobic010G198100 Sobic010G198100 Sobic010G133700--Sobic010G198100 Sobic010G133700--Sobic001G082500 Sobic007G194800 Sobic007G194800 Sobic010G133700--Sobic007G194800 Sobic010G133700--Sobic006G132400 Sobic001G196700--Sobic006G132400 Sobic001G367700 Sobic001G367700 Sobic001G196700--Sobic001G367700 Sobic001G196700--Sobic010G168500 Sobic001G196700--Sobic003G376000 Sobic002G077600 Sobic002G077600 Sobic001G196700--Sobic002G077600 Sobic007G049400 Sobic007G049400 Sobic001G196700--Sobic007G049400 Sobic001G112250 Sobic001G112250 Sobic001G196700--Sobic001G112250 Sobic005G112066 Sobic005G112066 Sobic001G196700--Sobic005G112066 Sobic001G253501 Sobic001G253501 Sobic001G196700--Sobic001G253501 Sobic006G132400--Sobic001G196700 Sobic006G132400--Sobic003G376000 Sobic008G154400 Sobic008G154400 Sobic006G132400--Sobic008G154400 Sobic006G132400--Sobic005G112066 Sobic007G156300 Sobic007G156300 Sobic006G132400--Sobic007G156300 Sobic002G077500 Sobic002G077500 Sobic006G132400--Sobic002G077500 Sobic006G132400--Sobic007G049400 Sobic001G326000 Sobic001G326000 Sobic006G132400--Sobic001G326000 Sobic010G095300 Sobic010G095300 Sobic006G132400--Sobic010G095300 Sobic003G095600--Sobic008G154400 Sobic001G166500 Sobic001G166500 Sobic003G095600--Sobic001G166500 Sobic006G096200 Sobic006G096200 Sobic003G095600--Sobic006G096200 Sobic003G095600--Sobic003G376000 Sobic009G231500 Sobic009G231500 Sobic003G095600--Sobic009G231500 Sobic003G438700 Sobic003G438700 Sobic003G095600--Sobic003G438700 Sobic006G059900 Sobic006G059900 Sobic003G095600--Sobic006G059900 Sobic004G068000 Sobic004G068000 Sobic003G095600--Sobic004G068000 Sobic001G203100 Sobic001G203100 Sobic003G095600--Sobic001G203100 Sobic008G039700 Sobic008G039700 Sobic010G168500--Sobic008G039700 Sobic009G071600 Sobic009G071600 Sobic010G168500--Sobic009G071600 Sobic007G034900 Sobic007G034900 Sobic010G168500--Sobic007G034900 Sobic001G259250 Sobic001G259250 Sobic010G168500--Sobic001G259250 Sobic005G153200 Sobic005G153200 Sobic010G168500--Sobic005G153200 Sobic010G200200 Sobic010G200200 Sobic010G168500--Sobic010G200200 Sobic004G142000 Sobic004G142000 Sobic010G168500--Sobic004G142000 Sobic001G037800 Sobic001G037800 Sobic010G168500--Sobic001G037800 Sobic002G338600 Sobic002G338600 Sobic010G168500--Sobic002G338600 Sobic001G417600--Sobic010G133700 Sobic006G139000 Sobic006G139000 Sobic001G417600--Sobic006G139000 Sobic001G280000 Sobic001G280000 Sobic001G417600--Sobic001G280000 Sobic001G417600--Sobic003G036700 Sobic001G417600--Sobic001G082500 Sobic009G208500 Sobic009G208500 Sobic001G417600--Sobic009G208500 Sobic001G417600--Sobic006G147400 Sobic007G178100 Sobic007G178100 Sobic001G417600--Sobic007G178100 Sobic001G417600--Sobic007G194800 Sobic001G082500--Sobic003G036700 Sobic001G082500--Sobic001G417600 Sobic001G082500--Sobic010G133700 Sobic001G082500--Sobic006G147400 Sobic001G082500--Sobic006G132400 Sobic001G082500--Sobic001G196700 Sobic001G082500--Sobic006G139000 Sobic001G082500--Sobic007G194800 Sobic001G082500--Sobic001G280000 Sobic010G136300 Sobic010G136300 Sobic003G376000--Sobic010G136300 Sobic010G031600 Sobic010G031600 Sobic003G376000--Sobic010G031600 Sobic001G277800 Sobic001G277800 Sobic003G376000--Sobic001G277800 Sobic009G009800 Sobic009G009800 Sobic003G376000--Sobic009G009800 Sobic003G376000--Sobic006G096200 Sobic003G376000--Sobic002G077500 Sobic003G376000--Sobic005G112066 Sobic003G376000--Sobic001G326000 Sobic003G376000--Sobic007G049400 Sobic006G147400--Sobic010G133700 Sobic006G147400--Sobic003G036700 Sobic006G147400--Sobic001G417600 Sobic006G147400--Sobic003G095600 Sobic006G147400--Sobic006G132400 Sobic006G147400--Sobic008G154400 Sobic006G147400--Sobic003G376000 Sobic004G214000 Sobic004G214000 Sobic006G147400--Sobic004G214000 Sobic006G147400--Sobic001G196700
Octagon: transcription factors


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