Gene annotation
Transcriptome id Sobic.001G082500.2
Synonym CYP81D2, Sb01g007430
Functional annotation cytochrome P450, putative, expressed
UniProt A0A1Z5S4V6
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF123
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G23190 : cytochrome P450, family 81, subfamily D, polypeptide 7
RAP-DB (Rice) LOC_Os03g55240.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a008249 , Zm00025a008250
Brachypodium KQK14241 , KQK13081
Barley -
Wheat TraesCS5B02G402900 , TraesCS5B02G403000
Populus -


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cDNA sequences
Sobic.001G082500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G036700 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
2 Sobic.001G417600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
3 Sobic.010G133700 - -
4 Sobic.006G147400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@A NAC transcription factor controlling cell collapse and secondary cell wall composition in the stem(PubMedID : 30309900)@We identified D as a single gene encoding a NAC transcription factor that controls the expression of genes involved in plant PCD (programmed cell death).(PubMedID : 30150370)@"we apply fine-mapping and genome-wide association study (GWAS) to identify a candidate gene underlying D, and use nearly isogenic lines (NILs) to characterize the transcriptional, compositional, and agronomic effects of variation at the D locus."(PubMedID : 31245734)@no apical meristem protein, putative, expressed -
5 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
6 Sobic.001G196700 OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed -
7 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
8 Sobic.007G194800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
9 Sobic.001G280000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP46 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
10 Sobic.005G175200 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.010G168500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
12 Sobic.004G256800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
13 Sobic.009G237700 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
14 Sobic.003G095600 glycosyltransferase, putative, expressed -
15 Sobic.003G376000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
16 Sobic.006G232500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
17 Sobic.009G055600 TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
18 Sobic.003G086500 expressed protein -
19 Sobic.001G442200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
20 Sobic.005G019800 ZF-HD protein dimerisation region containing protein, expressed -


Gene co-expression network
sample Sobic001G082500 Sobic001G082500 Sobic003G036700 Sobic003G036700 Sobic001G082500--Sobic003G036700 Sobic001G417600 Sobic001G417600 Sobic001G082500--Sobic001G417600 Sobic010G133700 Sobic010G133700 Sobic001G082500--Sobic010G133700 Sobic006G147400 Sobic006G147400 Sobic001G082500--Sobic006G147400 Sobic006G132400 Sobic006G132400 Sobic001G082500--Sobic006G132400 Sobic001G196700 Sobic001G196700 Sobic001G082500--Sobic001G196700 Sobic006G139000 Sobic006G139000 Sobic001G082500--Sobic006G139000 Sobic007G194800 Sobic007G194800 Sobic001G082500--Sobic007G194800 Sobic001G280000 Sobic001G280000 Sobic001G082500--Sobic001G280000 Sobic003G036700--Sobic010G133700 Sobic003G036700--Sobic001G196700 Sobic003G036700--Sobic006G132400 Sobic003G095600 Sobic003G095600 Sobic003G036700--Sobic003G095600 Sobic010G168500 Sobic010G168500 Sobic003G036700--Sobic010G168500 Sobic003G036700--Sobic001G417600 Sobic003G036700--Sobic001G082500 Sobic003G376000 Sobic003G376000 Sobic003G036700--Sobic003G376000 Sobic003G036700--Sobic006G147400 Sobic001G417600--Sobic010G133700 Sobic001G417600--Sobic006G139000 Sobic001G417600--Sobic001G280000 Sobic001G417600--Sobic003G036700 Sobic001G417600--Sobic001G082500 Sobic009G208500 Sobic009G208500 Sobic001G417600--Sobic009G208500 Sobic001G417600--Sobic006G147400 Sobic007G178100 Sobic007G178100 Sobic001G417600--Sobic007G178100 Sobic001G417600--Sobic007G194800 Sobic010G133700--Sobic001G417600 Sobic010G133700--Sobic003G036700 Sobic005G175200 Sobic005G175200 Sobic010G133700--Sobic005G175200 Sobic010G133700--Sobic003G095600 Sobic010G133700--Sobic006G147400 Sobic010G198100 Sobic010G198100 Sobic010G133700--Sobic010G198100 Sobic010G133700--Sobic001G082500 Sobic010G133700--Sobic007G194800 Sobic010G133700--Sobic006G132400 Sobic006G147400--Sobic010G133700 Sobic006G147400--Sobic003G036700 Sobic006G147400--Sobic001G417600 Sobic006G147400--Sobic003G095600 Sobic006G147400--Sobic006G132400 Sobic008G154400 Sobic008G154400 Sobic006G147400--Sobic008G154400 Sobic006G147400--Sobic003G376000 Sobic004G214000 Sobic004G214000 Sobic006G147400--Sobic004G214000 Sobic006G147400--Sobic001G196700 Sobic006G132400--Sobic001G196700 Sobic006G132400--Sobic003G376000 Sobic006G132400--Sobic008G154400 Sobic005G112066 Sobic005G112066 Sobic006G132400--Sobic005G112066 Sobic007G156300 Sobic007G156300 Sobic006G132400--Sobic007G156300 Sobic002G077500 Sobic002G077500 Sobic006G132400--Sobic002G077500 Sobic007G049400 Sobic007G049400 Sobic006G132400--Sobic007G049400 Sobic001G326000 Sobic001G326000 Sobic006G132400--Sobic001G326000 Sobic010G095300 Sobic010G095300 Sobic006G132400--Sobic010G095300 Sobic001G196700--Sobic006G132400 Sobic001G367700 Sobic001G367700 Sobic001G196700--Sobic001G367700 Sobic001G196700--Sobic010G168500 Sobic001G196700--Sobic003G376000 Sobic002G077600 Sobic002G077600 Sobic001G196700--Sobic002G077600 Sobic001G196700--Sobic007G049400 Sobic001G112250 Sobic001G112250 Sobic001G196700--Sobic001G112250 Sobic001G196700--Sobic005G112066 Sobic001G253501 Sobic001G253501 Sobic001G196700--Sobic001G253501 Sobic002G058500 Sobic002G058500 Sobic006G139000--Sobic002G058500 Sobic006G139000--Sobic001G417600 Sobic006G139000--Sobic001G280000 Sobic005G019800 Sobic005G019800 Sobic006G139000--Sobic005G019800 Sobic001G395700 Sobic001G395700 Sobic006G139000--Sobic001G395700 Sobic003G226200 Sobic003G226200 Sobic006G139000--Sobic003G226200 Sobic005G197100 Sobic005G197100 Sobic006G139000--Sobic005G197100 Sobic003G304200 Sobic003G304200 Sobic006G139000--Sobic003G304200 Sobic009G055600 Sobic009G055600 Sobic006G139000--Sobic009G055600 Sobic007G194800--Sobic003G036700 Sobic007G194800--Sobic001G417600 Sobic007G194800--Sobic010G133700 Sobic007G194800--Sobic001G196700 Sobic007G194800--Sobic006G147400 Sobic007G194800--Sobic006G132400 Sobic007G194800--Sobic010G168500 Sobic009G237700 Sobic009G237700 Sobic007G194800--Sobic009G237700 Sobic007G194800--Sobic001G082500 Sobic001G280000--Sobic006G139000 Sobic001G280000--Sobic001G417600 Sobic001G280000--Sobic002G058500 Sobic001G227800 Sobic001G227800 Sobic001G280000--Sobic001G227800 Sobic001G162700 Sobic001G162700 Sobic001G280000--Sobic001G162700 Sobic001G280000--Sobic005G019800 Sobic010G098100 Sobic010G098100 Sobic001G280000--Sobic010G098100 Sobic001G251900 Sobic001G251900 Sobic001G280000--Sobic001G251900 Sobic003G259200 Sobic003G259200 Sobic001G280000--Sobic003G259200
Octagon: transcription factors


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