Gene annotation
Transcriptome id Sobic.001G323000.1
Synonym Sb01g031330
Functional annotation UBX domain-containing protein, putative, expressed
UniProt C5WUN2
Pfam PF00789 PF14555
Panther DB PTHR23322:SF1 PTHR23322
NCBI CDD KOG1363; Predicted regulator of the ubiquitin pathway (contains UAS and UBX domains)
KEGG Orthology K18726; FAF2, FAS-associated factor 2
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G10790 : UBX domain-containing protein
RAP-DB (Rice) LOC_Os10g37630.1 : UBX domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a003059 , Zm00025a053634 , Zm00025a006440
Brachypodium KQJ97490
Barley HORVU1Hr1G048390.1 , HORVU3Hr1G039460.1
Wheat TraesCS1B02G198000 , TraesCS1D02G186100 , TraesCS1A02G182700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
2 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
3 Sobic.009G228700 expressed protein -
4 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
5 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
6 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
8 Sobic.010G000900 spotted leaf 11, putative, expressed -
9 Sobic.001G085100 expressed protein -
10 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
11 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
12 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
13 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
14 Sobic.002G418700 expressed protein -
15 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
16 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
17 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
18 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
19 Sobic.006G194500 expressed protein -
20 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic001G323000 Sobic001G323000 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic009G228700 Sobic009G228700 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic003G312200 Sobic003G312200 Sobic001G323000--Sobic003G312200 Sobic006G148200 Sobic006G148200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic001G323000--Sobic001G085100 Sobic001G206900--Sobic001G323000 Sobic001G206900--Sobic003G312200 Sobic004G010900 Sobic004G010900 Sobic001G206900--Sobic004G010900 Sobic004G181900 Sobic004G181900 Sobic001G206900--Sobic004G181900 Sobic001G206900--Sobic001G085100 Sobic009G149500 Sobic009G149500 Sobic001G206900--Sobic009G149500 Sobic001G206900--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G206900--Sobic007G167900 Sobic003G349300 Sobic003G349300 Sobic001G206900--Sobic003G349300 Sobic006G034000--Sobic003G312200 Sobic006G034000--Sobic001G323000 Sobic003G436300 Sobic003G436300 Sobic006G034000--Sobic003G436300 Sobic006G034000--Sobic006G148200 Sobic001G180900 Sobic001G180900 Sobic006G034000--Sobic001G180900 Sobic010G130000 Sobic010G130000 Sobic006G034000--Sobic010G130000 Sobic001G091300 Sobic001G091300 Sobic006G034000--Sobic001G091300 Sobic008G110600 Sobic008G110600 Sobic006G034000--Sobic008G110600 Sobic006G034000--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G228700--Sobic004G066200 Sobic009G228700--Sobic009G207000 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic009G228700--Sobic006G148200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic001G057800--Sobic001G323000 Sobic002G400000 Sobic002G400000 Sobic001G057800--Sobic002G400000 Sobic002G352700 Sobic002G352700 Sobic001G057800--Sobic002G352700 Sobic002G385900 Sobic002G385900 Sobic001G057800--Sobic002G385900 Sobic001G158500 Sobic001G158500 Sobic001G057800--Sobic001G158500 Sobic004G130900 Sobic004G130900 Sobic001G057800--Sobic004G130900 Sobic001G057800--Sobic010G000900 Sobic010G168600 Sobic010G168600 Sobic001G057800--Sobic010G168600 Sobic001G057800--Sobic009G207000 Sobic003G312200--Sobic006G034000 Sobic003G312200--Sobic001G091300 Sobic003G312200--Sobic001G323000 Sobic003G312200--Sobic001G206900 Sobic003G312200--Sobic009G228700 Sobic001G261436 Sobic001G261436 Sobic003G312200--Sobic001G261436 Sobic003G312200--Sobic001G085100 Sobic003G312200--Sobic010G130000 Sobic005G074500 Sobic005G074500 Sobic003G312200--Sobic005G074500 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic006G148200--Sobic001G085100 Sobic006G148200--Sobic006G034000 Sobic006G148200--Sobic001G323000 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic006G148200--Sobic001G206900 Sobic006G148200--Sobic010G000900 Sobic001G048700 Sobic001G048700 Sobic006G148200--Sobic001G048700 Sobic009G207000--Sobic009G228700 Sobic009G207000--Sobic004G066200 Sobic001G199100 Sobic001G199100 Sobic009G207000--Sobic001G199100 Sobic009G207000--Sobic001G323000 Sobic009G207000--Sobic001G085100 Sobic009G207000--Sobic006G249700 Sobic009G207000--Sobic006G148200 Sobic009G207000--Sobic010G000900 Sobic003G012200 Sobic003G012200 Sobic009G207000--Sobic003G012200 Sobic010G000900--Sobic002G400000 Sobic010G000900--Sobic003G012200 Sobic001G047400 Sobic001G047400 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic010G000900--Sobic004G130900 Sobic001G051200 Sobic001G051200 Sobic010G000900--Sobic001G051200 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic010G000900--Sobic001G085100 Sobic006G101700 Sobic006G101700 Sobic001G085100--Sobic006G101700 Sobic001G085100--Sobic001G261436 Sobic001G085100--Sobic006G148200 Sobic001G085100--Sobic007G167900 Sobic001G085100--Sobic001G206900 Sobic001G085100--Sobic001G047400 Sobic001G085100--Sobic004G066200 Sobic001G085100--Sobic001G091300 Sobic001G085100--Sobic003G012200
Octagon: transcription factors


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