Gene annotation
Transcriptome id Sobic.009G138100.1,Sobic.009G138100.2
Synonym Sb09g020400
Functional annotation disease resistance protein RGA3, putative, expressed
UniProt A0A1Z5R2L5 , C5YXV4
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF530
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os05g34230.1 : disease resistance protein RGA3, putative, expressed
MaizeGDB (Corn) Zm00025a037421
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G138100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G278200 expressed protein -
2 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
3 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
4 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
5 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
6 Sobic.009G228700 expressed protein -
7 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
8 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
9 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
10 Sobic.006G194500 expressed protein -
11 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
12 Sobic.005G105000 STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.004G202500 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
14 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
15 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
16 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
17 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
18 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
19 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
20 Sobic.009G249200 transmembrane protein, putative, expressed -


Gene co-expression network
sample Sobic009G138100 Sobic009G138100 Sobic010G278200 Sobic010G278200 Sobic009G138100--Sobic010G278200 Sobic010G130000 Sobic010G130000 Sobic009G138100--Sobic010G130000 Sobic003G248200 Sobic003G248200 Sobic009G138100--Sobic003G248200 Sobic001G124200 Sobic001G124200 Sobic009G138100--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic009G138100--Sobic006G033200 Sobic009G228700 Sobic009G228700 Sobic009G138100--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G138100--Sobic004G066200 Sobic009G219000 Sobic009G219000 Sobic009G138100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic009G138100--Sobic001G323000 Sobic010G147100 Sobic010G147100 Sobic010G278200--Sobic010G147100 Sobic010G278200--Sobic009G138100 Sobic010G278200--Sobic010G130000 Sobic010G278200--Sobic001G124200 Sobic010G278200--Sobic006G033200 Sobic005G126600 Sobic005G126600 Sobic010G278200--Sobic005G126600 Sobic003G118200 Sobic003G118200 Sobic010G278200--Sobic003G118200 Sobic003G316500 Sobic003G316500 Sobic010G278200--Sobic003G316500 Sobic008G124900 Sobic008G124900 Sobic010G278200--Sobic008G124900 Sobic010G130000--Sobic006G033200 Sobic010G130000--Sobic010G278200 Sobic010G130000--Sobic009G138100 Sobic006G034000 Sobic006G034000 Sobic010G130000--Sobic006G034000 Sobic003G312200 Sobic003G312200 Sobic010G130000--Sobic003G312200 Sobic010G130000--Sobic001G124200 Sobic001G390800 Sobic001G390800 Sobic010G130000--Sobic001G390800 Sobic001G085100 Sobic001G085100 Sobic010G130000--Sobic001G085100 Sobic010G130000--Sobic008G124900 Sobic001G512700 Sobic001G512700 Sobic003G248200--Sobic001G512700 Sobic001G356600 Sobic001G356600 Sobic003G248200--Sobic001G356600 Sobic008G179700 Sobic008G179700 Sobic003G248200--Sobic008G179700 Sobic003G248200--Sobic004G066200 Sobic008G047800 Sobic008G047800 Sobic003G248200--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic003G248200--Sobic006G200600 Sobic003G081000 Sobic003G081000 Sobic003G248200--Sobic003G081000 Sobic004G274200 Sobic004G274200 Sobic003G248200--Sobic004G274200 Sobic002G297200 Sobic002G297200 Sobic003G248200--Sobic002G297200 Sobic010G205800 Sobic010G205800 Sobic001G124200--Sobic010G205800 Sobic010G020300 Sobic010G020300 Sobic001G124200--Sobic010G020300 Sobic003G155900 Sobic003G155900 Sobic001G124200--Sobic003G155900 Sobic004G039600 Sobic004G039600 Sobic001G124200--Sobic004G039600 Sobic001G124200--Sobic010G278200 Sobic007G132100 Sobic007G132100 Sobic001G124200--Sobic007G132100 Sobic001G124200--Sobic009G138100 Sobic001G124200--Sobic001G390800 Sobic001G124200--Sobic009G228700 Sobic006G033200--Sobic010G130000 Sobic006G033200--Sobic008G124900 Sobic006G033200--Sobic010G278200 Sobic006G033200--Sobic009G138100 Sobic007G093800 Sobic007G093800 Sobic006G033200--Sobic007G093800 Sobic004G202500 Sobic004G202500 Sobic006G033200--Sobic004G202500 Sobic007G179800 Sobic007G179800 Sobic006G033200--Sobic007G179800 Sobic003G302900 Sobic003G302900 Sobic006G033200--Sobic003G302900 Sobic006G033200--Sobic003G312200 Sobic009G228700--Sobic004G066200 Sobic009G207000 Sobic009G207000 Sobic009G228700--Sobic009G207000 Sobic001G091300 Sobic001G091300 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G228700--Sobic006G148200 Sobic009G228700--Sobic003G312200 Sobic009G228700--Sobic001G124200 Sobic004G066200--Sobic001G356600 Sobic004G066200--Sobic009G228700 Sobic006G101700 Sobic006G101700 Sobic004G066200--Sobic006G101700 Sobic001G080700 Sobic001G080700 Sobic004G066200--Sobic001G080700 Sobic001G392300 Sobic001G392300 Sobic004G066200--Sobic001G392300 Sobic003G352200 Sobic003G352200 Sobic004G066200--Sobic003G352200 Sobic004G066200--Sobic003G248200 Sobic004G353200 Sobic004G353200 Sobic004G066200--Sobic004G353200 Sobic004G066200--Sobic001G091300 Sobic001G541100 Sobic001G541100 Sobic009G219000--Sobic001G541100 Sobic009G219000--Sobic001G323000 Sobic001G261456 Sobic001G261456 Sobic009G219000--Sobic001G261456 Sobic008G046500 Sobic008G046500 Sobic009G219000--Sobic008G046500 Sobic001G466700 Sobic001G466700 Sobic009G219000--Sobic001G466700 Sobic004G274400 Sobic004G274400 Sobic009G219000--Sobic004G274400 Sobic009G219000--Sobic009G138100 Sobic001G105500 Sobic001G105500 Sobic009G219000--Sobic001G105500 Sobic001G371200 Sobic001G371200 Sobic009G219000--Sobic001G371200 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic001G323000--Sobic006G034000 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic001G323000--Sobic003G312200 Sobic001G323000--Sobic006G148200 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G323000--Sobic001G085100
Octagon: transcription factors


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