Gene annotation
Transcriptome id Sobic.001G124200.1
Synonym ETR, Sb01g010930, ETR1, EIN1, AtETR1
Functional annotation ethylene receptor, putative, expressed
UniProt C5WNT8
Pfam PF01590 PF00512 PF02518
Panther DB PTHR24423 PTHR24423:SF515
NCBI CDD KOG0519; Sensory transduction histidine kinase
KEGG Orthology K14509; ETR, ethylene receptor
Gene Ontology GO:0005515; protein binding GO:0007165signal transduction GO:0000155phosphorelay sensor kinase activity


Orthologs (automatic annotation)
TAIR AT1G66340 : Signal transduction histidine kinase, hybrid-type, ethylene sensor
RAP-DB (Rice) LOC_Os03g49500.2 : ethylene receptor, putative, expressed
MaizeGDB (Corn) Zm00025a007748 , Zm00025a017051
Brachypodium KQK13645 , PNT74266 , KQK13646
Barley HORVU4Hr1G006260.1 , HORVU4Hr1G006260.2 , HORVU4Hr1G006260.3 , HORVU4Hr1G006260.4 , HORVU4Hr1G006260.5 , HORVU4Hr1G006260.6 , HORVU4Hr1G006260.7 , HORVU5Hr1G000590.1 , HORVU5Hr1G000590.3 , HORVU5Hr1G000590.2 , HORVU5Hr1G000590.4
Wheat TraesCS4B02G039300 , TraesCS5A02G002600 , TraesCS5D02G002600 , TraesCS4A02G274300 , TraesCS4D02G036400 , TraesCS4D02G036400
Populus -


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cDNA sequences
Sobic.001G124200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
2 Sobic.010G020300 spastin, putative, expressed K13254: spastin
3 Sobic.003G155900 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
4 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
5 Sobic.010G278200 expressed protein -
6 Sobic.007G132100 myrosinase precursor, putative, expressed -
7 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
8 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
9 Sobic.009G228700 expressed protein -
10 Sobic.002G262900 farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed K05955: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
11 Sobic.007G225100 ZOS8-09 - C2H2 zinc finger protein, expressed -
12 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
13 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
14 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
15 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
16 Sobic.008G112800 pre-mRNA-processing factor 6, putative, expressed K12855: PRPF6, pre-mRNA-processing factor 6
17 Sobic.004G002400 expressed protein -
18 Sobic.001G085100 expressed protein -
19 Sobic.002G299000 ribonuclease 2-5A family protein, expressed -
20 Sobic.001G094900 protein transport protein Sec23B, putative, expressed K14006: protein transport protein SEC23


Gene co-expression network
sample Sobic001G124200 Sobic001G124200 Sobic010G205800 Sobic010G205800 Sobic001G124200--Sobic010G205800 Sobic010G020300 Sobic010G020300 Sobic001G124200--Sobic010G020300 Sobic003G155900 Sobic003G155900 Sobic001G124200--Sobic003G155900 Sobic004G039600 Sobic004G039600 Sobic001G124200--Sobic004G039600 Sobic010G278200 Sobic010G278200 Sobic001G124200--Sobic010G278200 Sobic007G132100 Sobic007G132100 Sobic001G124200--Sobic007G132100 Sobic009G138100 Sobic009G138100 Sobic001G124200--Sobic009G138100 Sobic001G390800 Sobic001G390800 Sobic001G124200--Sobic001G390800 Sobic009G228700 Sobic009G228700 Sobic001G124200--Sobic009G228700 Sobic001G121200 Sobic001G121200 Sobic010G205800--Sobic001G121200 Sobic010G205800--Sobic001G390800 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic001G000200 Sobic001G000200 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic004G274200 Sobic004G274200 Sobic010G205800--Sobic004G274200 Sobic006G199200 Sobic006G199200 Sobic010G205800--Sobic006G199200 Sobic001G079200 Sobic001G079200 Sobic010G205800--Sobic001G079200 Sobic010G020300--Sobic001G124200 Sobic010G020300--Sobic010G205800 Sobic004G065000 Sobic004G065000 Sobic010G020300--Sobic004G065000 Sobic010G020300--Sobic001G390800 Sobic003G352200 Sobic003G352200 Sobic010G020300--Sobic003G352200 Sobic004G177300 Sobic004G177300 Sobic010G020300--Sobic004G177300 Sobic010G020300--Sobic010G278200 Sobic001G227400 Sobic001G227400 Sobic010G020300--Sobic001G227400 Sobic010G020300--Sobic001G121200 Sobic003G155900--Sobic003G352200 Sobic007G163100 Sobic007G163100 Sobic003G155900--Sobic007G163100 Sobic003G155900--Sobic001G124200 Sobic006G012500 Sobic006G012500 Sobic003G155900--Sobic006G012500 Sobic001G392300 Sobic001G392300 Sobic003G155900--Sobic001G392300 Sobic003G155900--Sobic002G262900 Sobic003G155900--Sobic010G205800 Sobic003G422900 Sobic003G422900 Sobic003G155900--Sobic003G422900 Sobic002G045600 Sobic002G045600 Sobic003G155900--Sobic002G045600 Sobic004G039600--Sobic006G012500 Sobic001G369000 Sobic001G369000 Sobic004G039600--Sobic001G369000 Sobic004G039600--Sobic007G132100 Sobic008G099800 Sobic008G099800 Sobic004G039600--Sobic008G099800 Sobic006G126100 Sobic006G126100 Sobic004G039600--Sobic006G126100 Sobic010G053800 Sobic010G053800 Sobic004G039600--Sobic010G053800 Sobic006G131000 Sobic006G131000 Sobic004G039600--Sobic006G131000 Sobic001G534800 Sobic001G534800 Sobic004G039600--Sobic001G534800 Sobic007G120500 Sobic007G120500 Sobic004G039600--Sobic007G120500 Sobic010G147100 Sobic010G147100 Sobic010G278200--Sobic010G147100 Sobic010G278200--Sobic009G138100 Sobic010G130000 Sobic010G130000 Sobic010G278200--Sobic010G130000 Sobic010G278200--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic010G278200--Sobic006G033200 Sobic005G126600 Sobic005G126600 Sobic010G278200--Sobic005G126600 Sobic003G118200 Sobic003G118200 Sobic010G278200--Sobic003G118200 Sobic003G316500 Sobic003G316500 Sobic010G278200--Sobic003G316500 Sobic008G124900 Sobic008G124900 Sobic010G278200--Sobic008G124900 Sobic007G218000 Sobic007G218000 Sobic007G132100--Sobic007G218000 Sobic004G072100 Sobic004G072100 Sobic007G132100--Sobic004G072100 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic007G132100--Sobic006G131000 Sobic007G132100--Sobic006G012500 Sobic009G044800 Sobic009G044800 Sobic007G132100--Sobic009G044800 Sobic007G132100--Sobic008G099800 Sobic010G204400 Sobic010G204400 Sobic007G132100--Sobic010G204400 Sobic009G138100--Sobic010G278200 Sobic009G138100--Sobic010G130000 Sobic003G248200 Sobic003G248200 Sobic009G138100--Sobic003G248200 Sobic009G138100--Sobic001G124200 Sobic009G138100--Sobic006G033200 Sobic009G138100--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G138100--Sobic004G066200 Sobic009G219000 Sobic009G219000 Sobic009G138100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic009G138100--Sobic001G323000 Sobic001G268200 Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic010G139600 Sobic010G139600 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200 Sobic009G228700--Sobic004G066200 Sobic009G207000 Sobic009G207000 Sobic009G228700--Sobic009G207000 Sobic001G091300 Sobic001G091300 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic006G148200 Sobic006G148200 Sobic009G228700--Sobic006G148200 Sobic003G312200 Sobic003G312200 Sobic009G228700--Sobic003G312200 Sobic009G228700--Sobic001G124200
Octagon: transcription factors


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