Gene annotation
Transcriptome id Sobic.009G238800.1
Synonym Sb09g029100
Functional annotation expressed protein
UniProt C5YW04
Pfam -
Panther DB PTHR34200 PTHR34200:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64385 : -
RAP-DB (Rice) LOC_Os05g49750.1 : expressed protein
MaizeGDB (Corn) Zm00025a036660
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G238800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G080200 emp24/gp25L/p24 family protein, putative, expressed -
2 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
4 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
5 Sobic.002G376300 FYVE zinc finger family protein, expressed -
6 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.001G048700 TBC domain containing protein, expressed -
8 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
9 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
10 Sobic.002G202400 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
11 Sobic.007G118000 double-stranded RNA binding motif containing protein, expressed -
12 Sobic.002G418700 expressed protein -
13 Sobic.003G400100 leaf senescence related protein, putative, expressed -
14 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
15 Sobic.003G219500 adaptin ear-binding coat-associated protein 2, putative, expressed -
16 Sobic.002G281300 trafficking protein particle complex subunit, putative, expressed -
17 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
18 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
19 Sobic.003G217100 Yip1 domain containing protein, expressed -
20 Sobic.009G226400 dynamin family protein, putative, expressed -


Gene co-expression network
sample Sobic009G238800 Sobic009G238800 Sobic010G080200 Sobic010G080200 Sobic009G238800--Sobic010G080200 Sobic006G232000 Sobic006G232000 Sobic009G238800--Sobic006G232000 Sobic006G217700 Sobic006G217700 Sobic009G238800--Sobic006G217700 Sobic001G033500 Sobic001G033500 Sobic009G238800--Sobic001G033500 Sobic002G376300 Sobic002G376300 Sobic009G238800--Sobic002G376300 Sobic006G148200 Sobic006G148200 Sobic009G238800--Sobic006G148200 Sobic001G048700 Sobic001G048700 Sobic009G238800--Sobic001G048700 Sobic001G067900 Sobic001G067900 Sobic009G238800--Sobic001G067900 Sobic001G206900 Sobic001G206900 Sobic009G238800--Sobic001G206900 Sobic001G051200 Sobic001G051200 Sobic010G080200--Sobic001G051200 Sobic010G080200--Sobic009G238800 Sobic002G281300 Sobic002G281300 Sobic010G080200--Sobic002G281300 Sobic010G080200--Sobic006G217700 Sobic005G155700 Sobic005G155700 Sobic010G080200--Sobic005G155700 Sobic010G080200--Sobic001G033500 Sobic001G057800 Sobic001G057800 Sobic010G080200--Sobic001G057800 Sobic002G202400 Sobic002G202400 Sobic010G080200--Sobic002G202400 Sobic010G205300 Sobic010G205300 Sobic010G080200--Sobic010G205300 Sobic006G232000--Sobic009G238800 Sobic003G009300 Sobic003G009300 Sobic006G232000--Sobic003G009300 Sobic006G232000--Sobic006G148200 Sobic001G077900 Sobic001G077900 Sobic006G232000--Sobic001G077900 Sobic003G270600 Sobic003G270600 Sobic006G232000--Sobic003G270600 Sobic004G010900 Sobic004G010900 Sobic006G232000--Sobic004G010900 Sobic010G261600 Sobic010G261600 Sobic006G232000--Sobic010G261600 Sobic010G064600 Sobic010G064600 Sobic006G232000--Sobic010G064600 Sobic002G294200 Sobic002G294200 Sobic006G232000--Sobic002G294200 Sobic010G017000 Sobic010G017000 Sobic006G217700--Sobic010G017000 Sobic006G217700--Sobic009G238800 Sobic001G323000 Sobic001G323000 Sobic006G217700--Sobic001G323000 Sobic010G016400 Sobic010G016400 Sobic006G217700--Sobic010G016400 Sobic004G054300 Sobic004G054300 Sobic006G217700--Sobic004G054300 Sobic004G132300 Sobic004G132300 Sobic006G217700--Sobic004G132300 Sobic006G217700--Sobic001G057800 Sobic006G217700--Sobic001G033500 Sobic007G148800 Sobic007G148800 Sobic006G217700--Sobic007G148800 Sobic001G283200 Sobic001G283200 Sobic001G033500--Sobic001G283200 Sobic007G184500 Sobic007G184500 Sobic001G033500--Sobic007G184500 Sobic001G033500--Sobic006G148200 Sobic007G118000 Sobic007G118000 Sobic001G033500--Sobic007G118000 Sobic001G085100 Sobic001G085100 Sobic001G033500--Sobic001G085100 Sobic010G073100 Sobic010G073100 Sobic001G033500--Sobic010G073100 Sobic001G458700 Sobic001G458700 Sobic001G033500--Sobic001G458700 Sobic002G113800 Sobic002G113800 Sobic001G033500--Sobic002G113800 Sobic003G012200 Sobic003G012200 Sobic001G033500--Sobic003G012200 Sobic002G376300--Sobic009G238800 Sobic002G376300--Sobic001G048700 Sobic003G219500 Sobic003G219500 Sobic002G376300--Sobic003G219500 Sobic002G378200 Sobic002G378200 Sobic002G376300--Sobic002G378200 Sobic002G376300--Sobic007G118000 Sobic009G054700 Sobic009G054700 Sobic002G376300--Sobic009G054700 Sobic007G115900 Sobic007G115900 Sobic002G376300--Sobic007G115900 Sobic002G376300--Sobic006G148200 Sobic002G376300--Sobic001G067900 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic006G148200--Sobic001G085100 Sobic006G034000 Sobic006G034000 Sobic006G148200--Sobic006G034000 Sobic006G148200--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G148200--Sobic009G228700 Sobic006G148200--Sobic001G033500 Sobic006G148200--Sobic001G206900 Sobic010G000900 Sobic010G000900 Sobic006G148200--Sobic010G000900 Sobic006G148200--Sobic001G048700 Sobic003G007500 Sobic003G007500 Sobic001G048700--Sobic003G007500 Sobic001G048700--Sobic006G148200 Sobic002G296300 Sobic002G296300 Sobic001G048700--Sobic002G296300 Sobic001G048700--Sobic002G376300 Sobic001G048700--Sobic009G228700 Sobic001G048700--Sobic009G238800 Sobic004G072800 Sobic004G072800 Sobic001G048700--Sobic004G072800 Sobic001G048700--Sobic001G323000 Sobic001G048700--Sobic007G118000 Sobic001G105100 Sobic001G105100 Sobic001G067900--Sobic001G105100 Sobic001G067900--Sobic004G072800 Sobic006G257001 Sobic006G257001 Sobic001G067900--Sobic006G257001 Sobic001G067900--Sobic002G281300 Sobic003G217100 Sobic003G217100 Sobic001G067900--Sobic003G217100 Sobic006G034800 Sobic006G034800 Sobic001G067900--Sobic006G034800 Sobic006G250900 Sobic006G250900 Sobic001G067900--Sobic006G250900 Sobic001G067900--Sobic010G205300 Sobic001G237500 Sobic001G237500 Sobic001G067900--Sobic001G237500 Sobic001G206900--Sobic001G323000 Sobic003G312200 Sobic003G312200 Sobic001G206900--Sobic003G312200 Sobic001G206900--Sobic004G010900 Sobic004G181900 Sobic004G181900 Sobic001G206900--Sobic004G181900 Sobic001G206900--Sobic001G085100 Sobic009G149500 Sobic009G149500 Sobic001G206900--Sobic009G149500 Sobic001G206900--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G206900--Sobic007G167900 Sobic003G349300 Sobic003G349300 Sobic001G206900--Sobic003G349300
Octagon: transcription factors


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