Gene annotation
Transcriptome id Sobic.009G149500.1,Sobic.009G149500.2
Synonym Sb09g021370
Functional annotation coiled-coil domain-containing protein 47 precursor, putative, expressed
UniProt A0A1B6P977 , A0A1B6P8V0
Pfam PF07946
Panther DB PTHR12883
NCBI CDD KOG2357; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24330 : Protein of unknown function (DUF1682)
RAP-DB (Rice) LOC_Os05g35710.1,LOC_Os05g35710.2 : coiled-coil domain-containing protein 47 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a043859 , Zm00025a037311
Brachypodium KQK06074 , KQK06075
Barley HORVU0Hr1G001340.1
Wheat TraesCS1B02G280700 , TraesCS1D02G270600 , TraesCS1A02G270400
Populus -


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cDNA sequences
Sobic.009G149500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
2 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
3 Sobic.007G188300 integral membrane family protein, putative, expressed -
4 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
5 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
6 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
7 Sobic.004G181900 expressed protein -
8 Sobic.004G010900 OsFBK2 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.003G338500 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
10 Sobic.006G029000 nicotiana lesion-inducing like, putative, expressed -
11 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
12 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
13 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
14 Sobic.003G444600 TGD2, putative, expressed -
15 Sobic.004G348900 expressed protein -
16 Sobic.004G194900 expressed protein -
17 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
18 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
19 Sobic.010G205300 secreted salivary protein, putative, expressed -
20 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B


Gene co-expression network
sample Sobic009G149500 Sobic009G149500 Sobic001G206900 Sobic001G206900 Sobic009G149500--Sobic001G206900 Sobic010G020400 Sobic010G020400 Sobic009G149500--Sobic010G020400 Sobic007G188300 Sobic007G188300 Sobic009G149500--Sobic007G188300 Sobic010G223300 Sobic010G223300 Sobic009G149500--Sobic010G223300 Sobic001G014800 Sobic001G014800 Sobic009G149500--Sobic001G014800 Sobic009G192000 Sobic009G192000 Sobic009G149500--Sobic009G192000 Sobic004G181900 Sobic004G181900 Sobic009G149500--Sobic004G181900 Sobic004G010900 Sobic004G010900 Sobic009G149500--Sobic004G010900 Sobic003G338500 Sobic003G338500 Sobic009G149500--Sobic003G338500 Sobic001G323000 Sobic001G323000 Sobic001G206900--Sobic001G323000 Sobic003G312200 Sobic003G312200 Sobic001G206900--Sobic003G312200 Sobic001G206900--Sobic004G010900 Sobic001G206900--Sobic004G181900 Sobic001G085100 Sobic001G085100 Sobic001G206900--Sobic001G085100 Sobic001G206900--Sobic009G149500 Sobic006G148200 Sobic006G148200 Sobic001G206900--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G206900--Sobic007G167900 Sobic003G349300 Sobic003G349300 Sobic001G206900--Sobic003G349300 Sobic002G020700 Sobic002G020700 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic010G020400--Sobic003G338500 Sobic010G020400--Sobic001G014800 Sobic002G008800 Sobic002G008800 Sobic010G020400--Sobic002G008800 Sobic008G055900 Sobic008G055900 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic001G333100 Sobic001G333100 Sobic010G020400--Sobic001G333100 Sobic010G020400--Sobic010G223300 Sobic007G188300--Sobic009G149500 Sobic007G188300--Sobic001G085100 Sobic010G205300 Sobic010G205300 Sobic007G188300--Sobic010G205300 Sobic006G244700 Sobic006G244700 Sobic007G188300--Sobic006G244700 Sobic001G263000 Sobic001G263000 Sobic007G188300--Sobic001G263000 Sobic007G188300--Sobic001G014800 Sobic007G014900 Sobic007G014900 Sobic007G188300--Sobic007G014900 Sobic004G356900 Sobic004G356900 Sobic007G188300--Sobic004G356900 Sobic002G209400 Sobic002G209400 Sobic007G188300--Sobic002G209400 Sobic010G223300--Sobic008G055900 Sobic001G449900 Sobic001G449900 Sobic010G223300--Sobic001G449900 Sobic010G223300--Sobic002G020700 Sobic010G223300--Sobic003G338500 Sobic006G260500 Sobic006G260500 Sobic010G223300--Sobic006G260500 Sobic004G092500 Sobic004G092500 Sobic010G223300--Sobic004G092500 Sobic010G223300--Sobic010G020400 Sobic010G223300--Sobic002G008800 Sobic006G180000 Sobic006G180000 Sobic010G223300--Sobic006G180000 Sobic001G014800--Sobic010G020400 Sobic009G084000 Sobic009G084000 Sobic001G014800--Sobic009G084000 Sobic001G014800--Sobic008G033500 Sobic001G014800--Sobic001G333100 Sobic001G014800--Sobic009G192000 Sobic002G047700 Sobic002G047700 Sobic001G014800--Sobic002G047700 Sobic001G014800--Sobic006G180000 Sobic006G201800 Sobic006G201800 Sobic001G014800--Sobic006G201800 Sobic002G263600 Sobic002G263600 Sobic001G014800--Sobic002G263600 Sobic001G031100 Sobic001G031100 Sobic009G192000--Sobic001G031100 Sobic009G192000--Sobic007G167900 Sobic009G192000--Sobic010G020400 Sobic009G192000--Sobic003G349300 Sobic009G192000--Sobic001G014800 Sobic009G192000--Sobic003G338500 Sobic009G192000--Sobic006G180000 Sobic009G192000--Sobic010G205300 Sobic003G374000 Sobic003G374000 Sobic009G192000--Sobic003G374000 Sobic004G181900--Sobic001G206900 Sobic004G181900--Sobic003G349300 Sobic001G283200 Sobic001G283200 Sobic004G181900--Sobic001G283200 Sobic004G181900--Sobic010G205300 Sobic006G281800 Sobic006G281800 Sobic004G181900--Sobic006G281800 Sobic009G225000 Sobic009G225000 Sobic004G181900--Sobic009G225000 Sobic004G348900 Sobic004G348900 Sobic004G181900--Sobic004G348900 Sobic004G181900--Sobic009G149500 Sobic004G181900--Sobic001G085100 Sobic004G010900--Sobic001G206900 Sobic001G458700 Sobic001G458700 Sobic004G010900--Sobic001G458700 Sobic004G082900 Sobic004G082900 Sobic004G010900--Sobic004G082900 Sobic006G252200 Sobic006G252200 Sobic004G010900--Sobic006G252200 Sobic004G010900--Sobic010G205300 Sobic003G261400 Sobic003G261400 Sobic004G010900--Sobic003G261400 Sobic001G338400 Sobic001G338400 Sobic004G010900--Sobic001G338400 Sobic004G010900--Sobic001G283200 Sobic004G010900--Sobic003G349300 Sobic003G338500--Sobic010G223300 Sobic010G261600 Sobic010G261600 Sobic003G338500--Sobic010G261600 Sobic003G338500--Sobic010G020400 Sobic004G275700 Sobic004G275700 Sobic003G338500--Sobic004G275700 Sobic003G338500--Sobic008G055900 Sobic003G338500--Sobic009G192000 Sobic009G224000 Sobic009G224000 Sobic003G338500--Sobic009G224000 Sobic003G338500--Sobic001G049400 Sobic003G338500--Sobic002G008800
Octagon: transcription factors


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