Gene annotation
Transcriptome id Sobic.003G444600.1,Sobic.003G444600.2
Synonym Sb03g047410, TGD2
Functional annotation TGD2, putative, expressed
UniProt C5XJE7
Pfam PF02470
Panther DB PTHR34675 PTHR34675:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20320 : trigalactosyldiacylglycerol2
RAP-DB (Rice) LOC_Os01g74280.1 : TGD2, putative, expressed
MaizeGDB (Corn) Zm00025a039035 , Zm00025a025821
Brachypodium KQJ99392
Barley HORVU7Hr1G059870.5 , HORVU5Hr1G010300.5 , HORVU5Hr1G010300.11 , HORVU5Hr1G010300.10 , HORVU5Hr1G010300.13 , HORVU5Hr1G010300.4 , HORVU5Hr1G010300.9 , HORVU5Hr1G010300.8 , HORVU7Hr1G059870.8 , HORVU7Hr1G059870.9 , HORVU7Hr1G059870.6 , HORVU7Hr1G059870.7 , HORVU7Hr1G059870.4 , HORVU5Hr1G010300.2 , HORVU7Hr1G059870.2 , HORVU7Hr1G059870.3 , HORVU5Hr1G010300.7 , HORVU5Hr1G010300.6 , HORVU7Hr1G059870.10 , HORVU5Hr1G010300.12 , HORVU5Hr1G010300.1 , HORVU5Hr1G010300.3
Wheat TraesCS5D02G050900 , TraesCS5B02G046100 , TraesCS5B02G046100 , TraesCS7D02G279700 , TraesCS7D02G279700 , TraesCS7B02G180000 , TraesCS7B02G180000 , TraesCS5A02G042500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G149500 coiled-coil domain-containing protein 47 precursor, putative, expressed -
2 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
3 Sobic.005G111900 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.007G200900 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
5 Sobic.004G175300 leucine-rich repeat receptor-like protein kinase 1, putative, expressed K03660: N-glycosylase/DNA lyase
6 Sobic.007G188300 integral membrane family protein, putative, expressed -
7 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
8 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
9 Sobic.001G473800 trpH, putative, expressed K07053: 3',5'-nucleoside bisphosphate phosphatase
10 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
11 Sobic.004G291400 rho guanine nucleotide exchange factor, putative, expressed -
12 Sobic.001G238700 TRM112, putative, expressed -
13 Sobic.001G169100 transporter, major facilitator family, putative, expressed -
14 Sobic.010G176300 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
15 Sobic.006G029000 nicotiana lesion-inducing like, putative, expressed -
16 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
17 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
18 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
19 Sobic.007G028500 expressed protein -
20 Sobic.001G070700 expressed protein -


Gene co-expression network
sample Sobic003G444600 Sobic003G444600 Sobic009G149500 Sobic009G149500 Sobic003G444600--Sobic009G149500 Sobic001G434200 Sobic001G434200 Sobic003G444600--Sobic001G434200 Sobic005G111900 Sobic005G111900 Sobic003G444600--Sobic005G111900 Sobic007G200900 Sobic007G200900 Sobic003G444600--Sobic007G200900 Sobic004G175300 Sobic004G175300 Sobic003G444600--Sobic004G175300 Sobic007G188300 Sobic007G188300 Sobic003G444600--Sobic007G188300 Sobic001G304000 Sobic001G304000 Sobic003G444600--Sobic001G304000 Sobic001G207500 Sobic001G207500 Sobic003G444600--Sobic001G207500 Sobic001G473800 Sobic001G473800 Sobic003G444600--Sobic001G473800 Sobic001G206900 Sobic001G206900 Sobic009G149500--Sobic001G206900 Sobic010G020400 Sobic010G020400 Sobic009G149500--Sobic010G020400 Sobic009G149500--Sobic007G188300 Sobic010G223300 Sobic010G223300 Sobic009G149500--Sobic010G223300 Sobic001G014800 Sobic001G014800 Sobic009G149500--Sobic001G014800 Sobic009G192000 Sobic009G192000 Sobic009G149500--Sobic009G192000 Sobic004G181900 Sobic004G181900 Sobic009G149500--Sobic004G181900 Sobic004G010900 Sobic004G010900 Sobic009G149500--Sobic004G010900 Sobic003G338500 Sobic003G338500 Sobic009G149500--Sobic003G338500 Sobic007G071900 Sobic007G071900 Sobic001G434200--Sobic007G071900 Sobic006G093300 Sobic006G093300 Sobic001G434200--Sobic006G093300 Sobic006G039400 Sobic006G039400 Sobic001G434200--Sobic006G039400 Sobic001G468600 Sobic001G468600 Sobic001G434200--Sobic001G468600 Sobic001G333100 Sobic001G333100 Sobic001G434200--Sobic001G333100 Sobic004G171200 Sobic004G171200 Sobic001G434200--Sobic004G171200 Sobic008G087900 Sobic008G087900 Sobic001G434200--Sobic008G087900 Sobic004G121300 Sobic004G121300 Sobic001G434200--Sobic004G121300 Sobic001G434200--Sobic001G014800 Sobic007G061400 Sobic007G061400 Sobic005G111900--Sobic007G061400 Sobic005G111900--Sobic001G014800 Sobic006G029000 Sobic006G029000 Sobic005G111900--Sobic006G029000 Sobic006G002201 Sobic006G002201 Sobic005G111900--Sobic006G002201 Sobic004G194900 Sobic004G194900 Sobic005G111900--Sobic004G194900 Sobic003G349300 Sobic003G349300 Sobic005G111900--Sobic003G349300 Sobic010G205300 Sobic010G205300 Sobic005G111900--Sobic010G205300 Sobic005G111900--Sobic001G473800 Sobic005G111900--Sobic009G149500 Sobic006G196300 Sobic006G196300 Sobic007G200900--Sobic006G196300 Sobic002G428800 Sobic002G428800 Sobic007G200900--Sobic002G428800 Sobic007G200900--Sobic009G149500 Sobic007G200900--Sobic001G473800 Sobic007G200900--Sobic010G223300 Sobic007G200900--Sobic001G434200 Sobic007G200900--Sobic003G444600 Sobic007G112600 Sobic007G112600 Sobic007G200900--Sobic007G112600 Sobic001G449900 Sobic001G449900 Sobic007G200900--Sobic001G449900 Sobic004G175300--Sobic001G434200 Sobic004G175300--Sobic007G188300 Sobic004G358600 Sobic004G358600 Sobic004G175300--Sobic004G358600 Sobic002G209400 Sobic002G209400 Sobic004G175300--Sobic002G209400 Sobic002G166300 Sobic002G166300 Sobic004G175300--Sobic002G166300 Sobic004G175300--Sobic004G171200 Sobic001G120500 Sobic001G120500 Sobic004G175300--Sobic001G120500 Sobic001G431000 Sobic001G431000 Sobic004G175300--Sobic001G431000 Sobic010G138000 Sobic010G138000 Sobic004G175300--Sobic010G138000 Sobic007G188300--Sobic009G149500 Sobic001G085100 Sobic001G085100 Sobic007G188300--Sobic001G085100 Sobic007G188300--Sobic010G205300 Sobic006G244700 Sobic006G244700 Sobic007G188300--Sobic006G244700 Sobic001G263000 Sobic001G263000 Sobic007G188300--Sobic001G263000 Sobic007G188300--Sobic001G014800 Sobic007G014900 Sobic007G014900 Sobic007G188300--Sobic007G014900 Sobic004G356900 Sobic004G356900 Sobic007G188300--Sobic004G356900 Sobic007G188300--Sobic002G209400 Sobic003G202100 Sobic003G202100 Sobic001G304000--Sobic003G202100 Sobic008G171400 Sobic008G171400 Sobic001G304000--Sobic008G171400 Sobic005G018800 Sobic005G018800 Sobic001G304000--Sobic005G018800 Sobic002G071100 Sobic002G071100 Sobic001G304000--Sobic002G071100 Sobic003G388900 Sobic003G388900 Sobic001G304000--Sobic003G388900 Sobic006G020900 Sobic006G020900 Sobic001G304000--Sobic006G020900 Sobic001G178500 Sobic001G178500 Sobic001G304000--Sobic001G178500 Sobic007G206300 Sobic007G206300 Sobic001G304000--Sobic007G206300 Sobic008G168200 Sobic008G168200 Sobic001G304000--Sobic008G168200 Sobic001G341500 Sobic001G341500 Sobic001G207500--Sobic001G341500 Sobic003G395300 Sobic003G395300 Sobic001G207500--Sobic003G395300 Sobic007G105900 Sobic007G105900 Sobic001G207500--Sobic007G105900 Sobic001G405600 Sobic001G405600 Sobic001G207500--Sobic001G405600 Sobic007G167900 Sobic007G167900 Sobic001G207500--Sobic007G167900 Sobic003G273400 Sobic003G273400 Sobic001G207500--Sobic003G273400 Sobic001G207500--Sobic006G039400 Sobic001G358500 Sobic001G358500 Sobic001G207500--Sobic001G358500 Sobic002G347000 Sobic002G347000 Sobic001G207500--Sobic002G347000 Sobic001G473800--Sobic005G111900 Sobic003G196200 Sobic003G196200 Sobic001G473800--Sobic003G196200 Sobic001G473800--Sobic001G304000 Sobic001G387800 Sobic001G387800 Sobic001G473800--Sobic001G387800 Sobic008G110500 Sobic008G110500 Sobic001G473800--Sobic008G110500 Sobic001G473800--Sobic001G178500 Sobic002G199400 Sobic002G199400 Sobic001G473800--Sobic002G199400 Sobic002G402500 Sobic002G402500 Sobic001G473800--Sobic002G402500 Sobic001G473800--Sobic006G029000
Octagon: transcription factors


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