Gene annotation
Transcriptome id Sobic.001G070700.1
Synonym GATL3, Sb01g006383
Functional annotation expressed protein
UniProt C5WZ33
Pfam PF01501
Panther DB PTHR13778 PTHR13778:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g56620.1 : expressed protein
MaizeGDB (Corn) Zm00025a016668 , Zm00025a023336
Brachypodium KQK12930
Barley HORVU5Hr1G099700.4 , HORVU5Hr1G099700.5 , HORVU5Hr1G099700.3 , HORVU5Hr1G099700.1 , HORVU5Hr1G099700.2
Wheat TraesCS4B02G009000
Populus -


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cDNA sequences
Sobic.001G070700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G337800 UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed K11718: UDP-glucose:glycoprotein glucosyltransferase
2 Sobic.010G176300 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
3 Sobic.001G405600 basic helix-loop-helix, putative, expressed K10863: aprataxin
4 Sobic.007G097400 sin-like protein conserved region containing protein, expressed K14721: RPC5, DNA-directed RNA polymerase III subunit RPC5
5 Sobic.001G276200 ACI13, putative, expressed -
6 Sobic.004G171200 WD domain, G-beta repeat domain containing protein, expressed K13124: mitogen-activated protein kinase organizer 1
7 Sobic.004G175300 leucine-rich repeat receptor-like protein kinase 1, putative, expressed K03660: N-glycosylase/DNA lyase
8 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
9 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
10 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
11 Sobic.003G444600 TGD2, putative, expressed -
12 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
13 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
14 Sobic.002G131400 GPI mannosyltransferase 1, putative, expressed K05284: GPI mannosyltransferase 1 subunit M
15 Sobic.001G434200 AGAP008572-PA, putative, expressed K17796: mitochondrial import inner membrane translocase subunit TIM21
16 Sobic.009G239200 - -
17 Sobic.001G205100 expressed protein -
18 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
19 Sobic.001G301200 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
20 Sobic.006G049600 methyltransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G070700 Sobic001G070700 Sobic004G337800 Sobic004G337800 Sobic001G070700--Sobic004G337800 Sobic010G176300 Sobic010G176300 Sobic001G070700--Sobic010G176300 Sobic001G405600 Sobic001G405600 Sobic001G070700--Sobic001G405600 Sobic007G097400 Sobic007G097400 Sobic001G070700--Sobic007G097400 Sobic001G276200 Sobic001G276200 Sobic001G070700--Sobic001G276200 Sobic004G171200 Sobic004G171200 Sobic001G070700--Sobic004G171200 Sobic004G175300 Sobic004G175300 Sobic001G070700--Sobic004G175300 Sobic007G105900 Sobic007G105900 Sobic001G070700--Sobic007G105900 Sobic002G364900 Sobic002G364900 Sobic001G070700--Sobic002G364900 Sobic001G301200 Sobic001G301200 Sobic004G337800--Sobic001G301200 Sobic010G059500 Sobic010G059500 Sobic004G337800--Sobic010G059500 Sobic009G084900 Sobic009G084900 Sobic004G337800--Sobic009G084900 Sobic003G405500 Sobic003G405500 Sobic004G337800--Sobic003G405500 Sobic009G131300 Sobic009G131300 Sobic004G337800--Sobic009G131300 Sobic001G214600 Sobic001G214600 Sobic004G337800--Sobic001G214600 Sobic002G227500 Sobic002G227500 Sobic004G337800--Sobic002G227500 Sobic006G021700 Sobic006G021700 Sobic004G337800--Sobic006G021700 Sobic008G124800 Sobic008G124800 Sobic004G337800--Sobic008G124800 Sobic001G501300 Sobic001G501300 Sobic010G176300--Sobic001G501300 Sobic003G212100 Sobic003G212100 Sobic010G176300--Sobic003G212100 Sobic010G176300--Sobic001G276200 Sobic002G428800 Sobic002G428800 Sobic010G176300--Sobic002G428800 Sobic003G134000 Sobic003G134000 Sobic010G176300--Sobic003G134000 Sobic006G089400 Sobic006G089400 Sobic010G176300--Sobic006G089400 Sobic010G176300--Sobic001G070700 Sobic004G318000 Sobic004G318000 Sobic010G176300--Sobic004G318000 Sobic010G100800 Sobic010G100800 Sobic010G176300--Sobic010G100800 Sobic007G017800 Sobic007G017800 Sobic001G405600--Sobic007G017800 Sobic010G034100 Sobic010G034100 Sobic001G405600--Sobic010G034100 Sobic001G405600--Sobic007G105900 Sobic001G405600--Sobic010G059500 Sobic003G143200 Sobic003G143200 Sobic001G405600--Sobic003G143200 Sobic006G234700 Sobic006G234700 Sobic001G405600--Sobic006G234700 Sobic006G039400 Sobic006G039400 Sobic001G405600--Sobic006G039400 Sobic003G296900 Sobic003G296900 Sobic001G405600--Sobic003G296900 Sobic001G035200 Sobic001G035200 Sobic001G405600--Sobic001G035200 Sobic009G213200 Sobic009G213200 Sobic007G097400--Sobic009G213200 Sobic007G097400--Sobic001G276200 Sobic007G097400--Sobic010G100800 Sobic007G097400--Sobic004G171200 Sobic001G450000 Sobic001G450000 Sobic007G097400--Sobic001G450000 Sobic003G209400 Sobic003G209400 Sobic007G097400--Sobic003G209400 Sobic006G128400 Sobic006G128400 Sobic007G097400--Sobic006G128400 Sobic006G125900 Sobic006G125900 Sobic007G097400--Sobic006G125900 Sobic006G137600 Sobic006G137600 Sobic007G097400--Sobic006G137600 Sobic006G077200 Sobic006G077200 Sobic001G276200--Sobic006G077200 Sobic001G449900 Sobic001G449900 Sobic001G276200--Sobic001G449900 Sobic001G493200 Sobic001G493200 Sobic001G276200--Sobic001G493200 Sobic003G249600 Sobic003G249600 Sobic001G276200--Sobic003G249600 Sobic004G096400 Sobic004G096400 Sobic001G276200--Sobic004G096400 Sobic006G207200 Sobic006G207200 Sobic001G276200--Sobic006G207200 Sobic001G276200--Sobic003G405500 Sobic003G057700 Sobic003G057700 Sobic001G276200--Sobic003G057700 Sobic001G276200--Sobic007G097400 Sobic008G051200 Sobic008G051200 Sobic004G171200--Sobic008G051200 Sobic002G298100 Sobic002G298100 Sobic004G171200--Sobic002G298100 Sobic001G434200 Sobic001G434200 Sobic004G171200--Sobic001G434200 Sobic004G171200--Sobic010G059500 Sobic004G171200--Sobic001G493200 Sobic001G120500 Sobic001G120500 Sobic004G171200--Sobic001G120500 Sobic009G239200 Sobic009G239200 Sobic004G171200--Sobic009G239200 Sobic006G155100 Sobic006G155100 Sobic004G171200--Sobic006G155100 Sobic004G171200--Sobic007G097400 Sobic004G175300--Sobic001G434200 Sobic007G188300 Sobic007G188300 Sobic004G175300--Sobic007G188300 Sobic004G358600 Sobic004G358600 Sobic004G175300--Sobic004G358600 Sobic002G209400 Sobic002G209400 Sobic004G175300--Sobic002G209400 Sobic002G166300 Sobic002G166300 Sobic004G175300--Sobic002G166300 Sobic004G175300--Sobic004G171200 Sobic004G175300--Sobic001G120500 Sobic001G431000 Sobic001G431000 Sobic004G175300--Sobic001G431000 Sobic010G138000 Sobic010G138000 Sobic004G175300--Sobic010G138000 Sobic007G105900--Sobic001G405600 Sobic007G105900--Sobic001G035200 Sobic007G105900--Sobic007G017800 Sobic002G136400 Sobic002G136400 Sobic007G105900--Sobic002G136400 Sobic001G207500 Sobic001G207500 Sobic007G105900--Sobic001G207500 Sobic007G105900--Sobic010G059500 Sobic007G105900--Sobic010G034100 Sobic002G131400 Sobic002G131400 Sobic007G105900--Sobic002G131400 Sobic007G189000 Sobic007G189000 Sobic007G105900--Sobic007G189000 Sobic003G304400 Sobic003G304400 Sobic002G364900--Sobic003G304400 Sobic010G192600 Sobic010G192600 Sobic002G364900--Sobic010G192600 Sobic006G265600 Sobic006G265600 Sobic002G364900--Sobic006G265600 Sobic001G015400 Sobic001G015400 Sobic002G364900--Sobic001G015400 Sobic002G364900--Sobic002G227500 Sobic006G106300 Sobic006G106300 Sobic002G364900--Sobic006G106300 Sobic001G099900 Sobic001G099900 Sobic002G364900--Sobic001G099900 Sobic001G085800 Sobic001G085800 Sobic002G364900--Sobic001G085800 Sobic001G474400 Sobic001G474400 Sobic002G364900--Sobic001G474400
Octagon: transcription factors


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