Gene annotation
Transcriptome id Sobic.009G099500.3,Sobic.009G099500.1,Sobic.009G099500.4,Sobic.009G099500.2
Synonym Sb09g015460
Functional annotation expressed protein
UniProt C5YW69 , C5YW68
Pfam PF04525
Panther DB PTHR31087:SF19 PTHR31087 PTHR31087 PTHR31087:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30270 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os05g27340.1 : expressed protein
MaizeGDB (Corn) Zm00025a043488
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G099500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
2 Sobic.005G150800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@yippee zinc-binding protein, putative, expressed -
3 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
4 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
5 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
6 Sobic.001G427200 josephin, putative, expressed K15235: josephin
7 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
8 Sobic.002G251700 no apical meristem protein, putative, expressed -
9 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
10 Sobic.004G067200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.004G167400 expressed protein -
12 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
13 Sobic.002G166900 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
14 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B
15 Sobic.003G246700 iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed -
16 Sobic.004G130900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
17 Sobic.009G210600 GTPase-activating protein, putative, expressed -
18 Sobic.007G068900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
19 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
20 Sobic.006G004600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase


Gene co-expression network
sample Sobic009G099500 Sobic009G099500 Sobic001G393800 Sobic001G393800 Sobic009G099500--Sobic001G393800 Sobic005G150800 Sobic005G150800 Sobic009G099500--Sobic005G150800 Sobic004G067100 Sobic004G067100 Sobic009G099500--Sobic004G067100 Sobic003G077900 Sobic003G077900 Sobic009G099500--Sobic003G077900 Sobic004G234900 Sobic004G234900 Sobic009G099500--Sobic004G234900 Sobic001G427200 Sobic001G427200 Sobic009G099500--Sobic001G427200 Sobic007G007000 Sobic007G007000 Sobic009G099500--Sobic007G007000 Sobic002G251700 Sobic002G251700 Sobic009G099500--Sobic002G251700 Sobic001G057800 Sobic001G057800 Sobic009G099500--Sobic001G057800 Sobic008G107500 Sobic008G107500 Sobic001G393800--Sobic008G107500 Sobic001G393800--Sobic005G150800 Sobic001G010400 Sobic001G010400 Sobic001G393800--Sobic001G010400 Sobic003G333400 Sobic003G333400 Sobic001G393800--Sobic003G333400 Sobic004G167400 Sobic004G167400 Sobic001G393800--Sobic004G167400 Sobic001G393800--Sobic001G057800 Sobic002G175500 Sobic002G175500 Sobic001G393800--Sobic002G175500 Sobic001G393800--Sobic009G099500 Sobic001G023200 Sobic001G023200 Sobic001G393800--Sobic001G023200 Sobic004G102400 Sobic004G102400 Sobic005G150800--Sobic004G102400 Sobic005G150800--Sobic001G393800 Sobic005G150800--Sobic008G107500 Sobic003G009100 Sobic003G009100 Sobic005G150800--Sobic003G009100 Sobic009G167700 Sobic009G167700 Sobic005G150800--Sobic009G167700 Sobic005G150800--Sobic001G057800 Sobic003G354400 Sobic003G354400 Sobic005G150800--Sobic003G354400 Sobic006G114800 Sobic006G114800 Sobic005G150800--Sobic006G114800 Sobic005G150800--Sobic004G167400 Sobic004G080100 Sobic004G080100 Sobic004G067100--Sobic004G080100 Sobic003G246700 Sobic003G246700 Sobic004G067100--Sobic003G246700 Sobic002G166900 Sobic002G166900 Sobic004G067100--Sobic002G166900 Sobic003G117900 Sobic003G117900 Sobic004G067100--Sobic003G117900 Sobic001G508100 Sobic001G508100 Sobic004G067100--Sobic001G508100 Sobic004G067100--Sobic004G167400 Sobic002G226900 Sobic002G226900 Sobic004G067100--Sobic002G226900 Sobic006G090000 Sobic006G090000 Sobic004G067100--Sobic006G090000 Sobic004G067100--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic003G077900--Sobic002G400000 Sobic007G168600 Sobic007G168600 Sobic003G077900--Sobic007G168600 Sobic003G217400 Sobic003G217400 Sobic003G077900--Sobic003G217400 Sobic010G188100 Sobic010G188100 Sobic003G077900--Sobic010G188100 Sobic004G060600 Sobic004G060600 Sobic003G077900--Sobic004G060600 Sobic001G220400 Sobic001G220400 Sobic003G077900--Sobic001G220400 Sobic004G348900 Sobic004G348900 Sobic003G077900--Sobic004G348900 Sobic009G219900 Sobic009G219900 Sobic003G077900--Sobic009G219900 Sobic004G130900 Sobic004G130900 Sobic003G077900--Sobic004G130900 Sobic001G098200 Sobic001G098200 Sobic004G234900--Sobic001G098200 Sobic006G225600 Sobic006G225600 Sobic004G234900--Sobic006G225600 Sobic002G122700 Sobic002G122700 Sobic004G234900--Sobic002G122700 Sobic001G162100 Sobic001G162100 Sobic004G234900--Sobic001G162100 Sobic004G234900--Sobic002G251700 Sobic010G174500 Sobic010G174500 Sobic004G234900--Sobic010G174500 Sobic006G254800 Sobic006G254800 Sobic004G234900--Sobic006G254800 Sobic001G180900 Sobic001G180900 Sobic004G234900--Sobic001G180900 Sobic010G000900 Sobic010G000900 Sobic004G234900--Sobic010G000900 Sobic003G436300 Sobic003G436300 Sobic001G427200--Sobic003G436300 Sobic001G427200--Sobic003G217400 Sobic004G174100 Sobic004G174100 Sobic001G427200--Sobic004G174100 Sobic001G427200--Sobic003G077900 Sobic001G427200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G427200--Sobic010G090900 Sobic003G116900 Sobic003G116900 Sobic001G427200--Sobic003G116900 Sobic005G044800 Sobic005G044800 Sobic001G427200--Sobic005G044800 Sobic003G299000 Sobic003G299000 Sobic001G427200--Sobic003G299000 Sobic009G217100 Sobic009G217100 Sobic007G007000--Sobic009G217100 Sobic001G123000 Sobic001G123000 Sobic007G007000--Sobic001G123000 Sobic001G137300 Sobic001G137300 Sobic007G007000--Sobic001G137300 Sobic007G007000--Sobic002G251700 Sobic009G259400 Sobic009G259400 Sobic007G007000--Sobic009G259400 Sobic007G007000--Sobic010G000900 Sobic002G352600 Sobic002G352600 Sobic007G007000--Sobic002G352600 Sobic001G121200 Sobic001G121200 Sobic007G007000--Sobic001G121200 Sobic005G203800 Sobic005G203800 Sobic007G007000--Sobic005G203800 Sobic002G251700--Sobic006G225600 Sobic003G295400 Sobic003G295400 Sobic002G251700--Sobic003G295400 Sobic002G251700--Sobic004G234900 Sobic002G251700--Sobic001G098200 Sobic010G009400 Sobic010G009400 Sobic002G251700--Sobic010G009400 Sobic002G251700--Sobic003G077900 Sobic002G251700--Sobic003G217400 Sobic002G251700--Sobic007G007000 Sobic002G251700--Sobic010G000900 Sobic001G323000 Sobic001G323000 Sobic001G057800--Sobic001G323000 Sobic001G057800--Sobic002G400000 Sobic002G352700 Sobic002G352700 Sobic001G057800--Sobic002G352700 Sobic002G385900 Sobic002G385900 Sobic001G057800--Sobic002G385900 Sobic001G158500 Sobic001G158500 Sobic001G057800--Sobic001G158500 Sobic001G057800--Sobic004G130900 Sobic001G057800--Sobic010G000900 Sobic010G168600 Sobic010G168600 Sobic001G057800--Sobic010G168600 Sobic009G207000 Sobic009G207000 Sobic001G057800--Sobic009G207000
Octagon: transcription factors


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