Gene annotation
Transcriptome id Sobic.003G246700.1
Synonym ISU1, ATISU1, Sb03g030300
Functional annotation iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed
UniProt C5XFX2
Pfam PF01592
Panther DB PTHR10093
NCBI CDD KOG3361; Iron binding protein involved in Fe-S cluster formation
KEGG Orthology -
Gene Ontology GO:0016226; iron-sulfur cluster assembly GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT4G22220 : SufE/NifU family protein
RAP-DB (Rice) LOC_Os01g47340.1 : iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044615 , Zm00025a028154 , Zm00025a038733
Brachypodium KQK04805 , KQK09051
Barley HORVU3Hr1G059830.7 , HORVU3Hr1G059830.6 , HORVU3Hr1G059830.1 , HORVU2Hr1G019850.9 , HORVU2Hr1G019850.8 , HORVU3Hr1G059830.5 , HORVU2Hr1G019850.1 , HORVU2Hr1G019850.3 , HORVU2Hr1G019850.2 , HORVU2Hr1G019850.5 , HORVU2Hr1G019850.4 , HORVU2Hr1G019850.7 , HORVU2Hr1G019850.6 , HORVU3Hr1G059830.2 , HORVU2Hr1G019850.38 , HORVU2Hr1G019850.19 , HORVU2Hr1G019850.18 , HORVU2Hr1G019850.15 , HORVU2Hr1G019850.32 , HORVU2Hr1G019850.17 , HORVU2Hr1G019850.16 , HORVU2Hr1G019850.11 , HORVU2Hr1G019850.36 , HORVU2Hr1G019850.13 , HORVU2Hr1G019850.34 , HORVU3Hr1G059830.3 , HORVU2Hr1G019850.33 , HORVU2Hr1G019850.14 , HORVU2Hr1G019850.31 , HORVU2Hr1G019850.30 , HORVU2Hr1G019850.12 , HORVU3Hr1G059830.4 , HORVU2Hr1G019850.37 , HORVU2Hr1G019850.10 , HORVU2Hr1G019850.28 , HORVU2Hr1G019850.29 , HORVU1Hr1G089730.1 , HORVU2Hr1G019850.35 , HORVU3Hr1G059830.8 , HORVU2Hr1G019850.20 , HORVU2Hr1G019850.21 , HORVU2Hr1G019850.22 , HORVU2Hr1G019850.23 , HORVU2Hr1G019850.24 , HORVU2Hr1G019850.25 , HORVU2Hr1G019850.26 , HORVU2Hr1G019850.27
Wheat TraesCS3A02G240500 , TraesCS1A02G406300 , TraesCS1B02G436500 , TraesCS1D02G414700 , TraesCS1A02G409000 , TraesCS3D02G240900 , TraesCS3B02G268800
Populus -


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cDNA sequences
Sobic.003G246700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
2 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
3 Sobic.010G049100 acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
4 Sobic.007G068900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
5 Sobic.010G000900 spotted leaf 11, putative, expressed -
6 Sobic.002G226900 zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed K07119: PTGR3, prostaglandin reductase 3
7 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
8 Sobic.007G216100 expressed protein -
9 Sobic.003G117900 protein kinase, putative, expressed -
10 Sobic.010G116400 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
11 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
12 Sobic.001G106700 expressed protein -
13 Sobic.002G375300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
14 Sobic.003G098000 armadillo/beta-catenin repeat family protein, putative, expressed K08332: vacuolar protein 8
15 Sobic.008G032600 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
16 Sobic.003G370900 expressed protein -
17 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
18 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.001G070000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
20 Sobic.002G352600 expressed protein -


Gene co-expression network
sample Sobic003G246700 Sobic003G246700 Sobic004G067100 Sobic004G067100 Sobic003G246700--Sobic004G067100 Sobic004G080100 Sobic004G080100 Sobic003G246700--Sobic004G080100 Sobic010G049100 Sobic010G049100 Sobic003G246700--Sobic010G049100 Sobic007G068900 Sobic007G068900 Sobic003G246700--Sobic007G068900 Sobic010G000900 Sobic010G000900 Sobic003G246700--Sobic010G000900 Sobic002G226900 Sobic002G226900 Sobic003G246700--Sobic002G226900 Sobic010G277100 Sobic010G277100 Sobic003G246700--Sobic010G277100 Sobic007G216100 Sobic007G216100 Sobic003G246700--Sobic007G216100 Sobic003G117900 Sobic003G117900 Sobic003G246700--Sobic003G117900 Sobic004G067100--Sobic004G080100 Sobic004G067100--Sobic003G246700 Sobic002G166900 Sobic002G166900 Sobic004G067100--Sobic002G166900 Sobic004G067100--Sobic003G117900 Sobic001G508100 Sobic001G508100 Sobic004G067100--Sobic001G508100 Sobic004G167400 Sobic004G167400 Sobic004G067100--Sobic004G167400 Sobic004G067100--Sobic002G226900 Sobic006G090000 Sobic006G090000 Sobic004G067100--Sobic006G090000 Sobic003G077900 Sobic003G077900 Sobic004G067100--Sobic003G077900 Sobic004G080100--Sobic010G049100 Sobic004G080100--Sobic004G067100 Sobic004G080100--Sobic003G246700 Sobic004G080100--Sobic002G226900 Sobic001G219300 Sobic001G219300 Sobic004G080100--Sobic001G219300 Sobic008G032600 Sobic008G032600 Sobic004G080100--Sobic008G032600 Sobic003G139800 Sobic003G139800 Sobic004G080100--Sobic003G139800 Sobic008G179900 Sobic008G179900 Sobic004G080100--Sobic008G179900 Sobic008G089900 Sobic008G089900 Sobic004G080100--Sobic008G089900 Sobic010G049100--Sobic004G080100 Sobic010G049100--Sobic003G246700 Sobic001G014800 Sobic001G014800 Sobic010G049100--Sobic001G014800 Sobic010G049100--Sobic008G032600 Sobic004G121300 Sobic004G121300 Sobic010G049100--Sobic004G121300 Sobic010G049100--Sobic002G226900 Sobic004G296400 Sobic004G296400 Sobic010G049100--Sobic004G296400 Sobic009G139900 Sobic009G139900 Sobic010G049100--Sobic009G139900 Sobic004G136300 Sobic004G136300 Sobic010G049100--Sobic004G136300 Sobic002G375300 Sobic002G375300 Sobic007G068900--Sobic002G375300 Sobic007G068900--Sobic003G246700 Sobic010G164000 Sobic010G164000 Sobic007G068900--Sobic010G164000 Sobic005G086100 Sobic005G086100 Sobic007G068900--Sobic005G086100 Sobic007G068900--Sobic004G067100 Sobic007G068900--Sobic010G000900 Sobic007G068900--Sobic001G508100 Sobic007G007000 Sobic007G007000 Sobic007G068900--Sobic007G007000 Sobic001G121200 Sobic001G121200 Sobic007G068900--Sobic001G121200 Sobic002G400000 Sobic002G400000 Sobic010G000900--Sobic002G400000 Sobic003G012200 Sobic003G012200 Sobic010G000900--Sobic003G012200 Sobic001G047400 Sobic001G047400 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic001G051200 Sobic001G051200 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100 Sobic009G075800 Sobic009G075800 Sobic002G226900--Sobic009G075800 Sobic004G275700 Sobic004G275700 Sobic002G226900--Sobic004G275700 Sobic002G226900--Sobic003G012200 Sobic001G199100 Sobic001G199100 Sobic002G226900--Sobic001G199100 Sobic009G217100 Sobic009G217100 Sobic002G226900--Sobic009G217100 Sobic003G365300 Sobic003G365300 Sobic002G226900--Sobic003G365300 Sobic010G251000 Sobic010G251000 Sobic002G226900--Sobic010G251000 Sobic002G226900--Sobic010G000900 Sobic001G203900 Sobic001G203900 Sobic002G226900--Sobic001G203900 Sobic001G364600 Sobic001G364600 Sobic010G277100--Sobic001G364600 Sobic005G168600 Sobic005G168600 Sobic010G277100--Sobic005G168600 Sobic010G277100--Sobic003G077900 Sobic001G417900 Sobic001G417900 Sobic010G277100--Sobic001G417900 Sobic001G053000 Sobic001G053000 Sobic010G277100--Sobic001G053000 Sobic002G111200 Sobic002G111200 Sobic010G277100--Sobic002G111200 Sobic010G277100--Sobic010G049100 Sobic010G277100--Sobic001G014800 Sobic007G188300 Sobic007G188300 Sobic010G277100--Sobic007G188300 Sobic007G216100--Sobic010G000900 Sobic002G247500 Sobic002G247500 Sobic007G216100--Sobic002G247500 Sobic007G216100--Sobic003G117900 Sobic003G295900 Sobic003G295900 Sobic007G216100--Sobic003G295900 Sobic001G106700 Sobic001G106700 Sobic007G216100--Sobic001G106700 Sobic007G216100--Sobic004G167400 Sobic007G216100--Sobic001G388200 Sobic007G216100--Sobic002G375300 Sobic003G370900 Sobic003G370900 Sobic007G216100--Sobic003G370900 Sobic010G042100 Sobic010G042100 Sobic003G117900--Sobic010G042100 Sobic003G117900--Sobic003G370900 Sobic003G117900--Sobic001G106700 Sobic001G329100 Sobic001G329100 Sobic003G117900--Sobic001G329100 Sobic001G007200 Sobic001G007200 Sobic003G117900--Sobic001G007200 Sobic003G117900--Sobic004G167400 Sobic003G117900--Sobic004G067100 Sobic002G045300 Sobic002G045300 Sobic003G117900--Sobic002G045300 Sobic010G253800 Sobic010G253800 Sobic003G117900--Sobic010G253800
Octagon: transcription factors


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