Gene annotation
Transcriptome id Sobic.002G174900.2,Sobic.002G174900.1
Synonym NFS1, NIFS1, ATNIFS1, ATNFS1, Sb02g022360
Functional annotation cysteine desulfurase 1, mitochondrial precursor, putative, expressed
UniProt A0A1B6QBZ8
Pfam PF01212
Panther DB PTHR11601 PTHR11601:SF34
NCBI CDD -
KEGG Orthology K04487; iscS, cysteine desulfurase
Gene Ontology GO:0016829; lyase activity GO:0006520cellular amino acid metabolic process


Orthologs (automatic annotation)
TAIR AT5G65720 : nitrogen fixation S (NIFS)-like 1
RAP-DB (Rice) LOC_Os09g16910.2 : cysteine desulfurase 1, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a046553
Brachypodium KQJ89884
Barley HORVU5Hr1G056530.4 , HORVU5Hr1G056530.2 , HORVU5Hr1G056530.3
Wheat TraesCS5A02G186000
Populus -


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cDNA sequences
Sobic.002G174900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G094800 sugar porter, putative, expressed -
2 Sobic.003G368800 expressed protein -
3 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
4 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.008G165700 expressed protein -
6 Sobic.001G377000 auxin-repressed protein, putative, expressed -
7 Sobic.006G171700 - -
8 Sobic.007G148200 auxin-repressed protein, putative, expressed -
9 Sobic.001G279200 PHLOEM 2-LIKE A10, putative, expressed -
10 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
11 Sobic.001G191100 OsFBX157 - F-box domain containing protein, expressed -
12 Sobic.003G264901 - -
13 Sobic.001G418800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
14 Sobic.007G054100 stress-induced protein, putative, expressed -
15 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
16 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
17 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
18 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
19 Sobic.002G131300 bacterial transferase hexapeptide domain containing protein, expressed -
20 Sobic.008G001400 expressed protein -


Gene co-expression network
sample Sobic002G174900 Sobic002G174900 Sobic009G094800 Sobic009G094800 Sobic002G174900--Sobic009G094800 Sobic003G368800 Sobic003G368800 Sobic002G174900--Sobic003G368800 Sobic003G308700 Sobic003G308700 Sobic002G174900--Sobic003G308700 Sobic002G040800 Sobic002G040800 Sobic002G174900--Sobic002G040800 Sobic008G165700 Sobic008G165700 Sobic002G174900--Sobic008G165700 Sobic001G377000 Sobic001G377000 Sobic002G174900--Sobic001G377000 Sobic006G171700 Sobic006G171700 Sobic002G174900--Sobic006G171700 Sobic007G148200 Sobic007G148200 Sobic002G174900--Sobic007G148200 Sobic001G279200 Sobic001G279200 Sobic002G174900--Sobic001G279200 Sobic009G094800--Sobic002G040800 Sobic009G094800--Sobic002G174900 Sobic009G094800--Sobic003G308700 Sobic001G429300 Sobic001G429300 Sobic009G094800--Sobic001G429300 Sobic007G062500 Sobic007G062500 Sobic009G094800--Sobic007G062500 Sobic008G081150 Sobic008G081150 Sobic009G094800--Sobic008G081150 Sobic001G427500 Sobic001G427500 Sobic009G094800--Sobic001G427500 Sobic006G028300 Sobic006G028300 Sobic009G094800--Sobic006G028300 Sobic001G031300 Sobic001G031300 Sobic009G094800--Sobic001G031300 Sobic001G144600 Sobic001G144600 Sobic003G368800--Sobic001G144600 Sobic003G368800--Sobic002G174900 Sobic005G025300 Sobic005G025300 Sobic003G368800--Sobic005G025300 Sobic003G368800--Sobic002G040800 Sobic004G147200 Sobic004G147200 Sobic003G368800--Sobic004G147200 Sobic002G227200 Sobic002G227200 Sobic003G368800--Sobic002G227200 Sobic004G227300 Sobic004G227300 Sobic003G368800--Sobic004G227300 Sobic001G276200 Sobic001G276200 Sobic003G368800--Sobic001G276200 Sobic003G368800--Sobic001G429300 Sobic002G073900 Sobic002G073900 Sobic003G308700--Sobic002G073900 Sobic007G054100 Sobic007G054100 Sobic003G308700--Sobic007G054100 Sobic003G308700--Sobic002G174900 Sobic002G273700 Sobic002G273700 Sobic003G308700--Sobic002G273700 Sobic006G172900 Sobic006G172900 Sobic003G308700--Sobic006G172900 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic009G008100 Sobic009G008100 Sobic003G308700--Sobic009G008100 Sobic002G187801 Sobic002G187801 Sobic003G308700--Sobic002G187801 Sobic010G228700 Sobic010G228700 Sobic002G040800--Sobic010G228700 Sobic002G040800--Sobic009G094800 Sobic001G544500 Sobic001G544500 Sobic002G040800--Sobic001G544500 Sobic002G040800--Sobic002G174900 Sobic008G001400 Sobic008G001400 Sobic002G040800--Sobic008G001400 Sobic004G135300 Sobic004G135300 Sobic002G040800--Sobic004G135300 Sobic006G042200 Sobic006G042200 Sobic002G040800--Sobic006G042200 Sobic002G040800--Sobic003G368800 Sobic006G263000 Sobic006G263000 Sobic002G040800--Sobic006G263000 Sobic006G273200 Sobic006G273200 Sobic008G165700--Sobic006G273200 Sobic009G233300 Sobic009G233300 Sobic008G165700--Sobic009G233300 Sobic010G268300 Sobic010G268300 Sobic008G165700--Sobic010G268300 Sobic008G165700--Sobic002G187801 Sobic002G365100 Sobic002G365100 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic003G018900 Sobic003G018900 Sobic008G165700--Sobic003G018900 Sobic003G000150 Sobic003G000150 Sobic008G165700--Sobic003G000150 Sobic001G191200 Sobic001G191200 Sobic001G377000--Sobic001G191200 Sobic009G213400 Sobic009G213400 Sobic001G377000--Sobic009G213400 Sobic004G096300 Sobic004G096300 Sobic001G377000--Sobic004G096300 Sobic003G406700 Sobic003G406700 Sobic001G377000--Sobic003G406700 Sobic001G377000--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic001G377000--Sobic001G293800 Sobic007G071000 Sobic007G071000 Sobic001G377000--Sobic007G071000 Sobic010G172200 Sobic010G172200 Sobic001G377000--Sobic010G172200 Sobic003G264901 Sobic003G264901 Sobic001G377000--Sobic003G264901 Sobic006G171700--Sobic004G227300 Sobic006G171700--Sobic003G123000 Sobic002G122600 Sobic002G122600 Sobic006G171700--Sobic002G122600 Sobic006G171700--Sobic008G165700 Sobic010G280100 Sobic010G280100 Sobic006G171700--Sobic010G280100 Sobic006G171700--Sobic001G429300 Sobic009G017400 Sobic009G017400 Sobic006G171700--Sobic009G017400 Sobic006G171700--Sobic010G268300 Sobic006G171700--Sobic002G174900 Sobic007G148200--Sobic001G377000 Sobic004G275200 Sobic004G275200 Sobic007G148200--Sobic004G275200 Sobic002G226000 Sobic002G226000 Sobic007G148200--Sobic002G226000 Sobic006G152600 Sobic006G152600 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G120401 Sobic007G120401 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic001G279200--Sobic002G174900 Sobic001G279200--Sobic008G165700 Sobic001G279200--Sobic009G213400 Sobic001G279200--Sobic006G171700 Sobic001G279200--Sobic006G042200 Sobic001G151900 Sobic001G151900 Sobic001G279200--Sobic001G151900 Sobic001G222900 Sobic001G222900 Sobic001G279200--Sobic001G222900 Sobic003G151800 Sobic003G151800 Sobic001G279200--Sobic003G151800 Sobic001G279200--Sobic007G054100
Octagon: transcription factors


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