Gene annotation
Transcriptome id Sobic.003G436500.1
Synonym Sb03g046730
Functional annotation ubiquitin-fold modifier 1 precursor, putative, expressed
UniProt C5XIN6
Pfam PF03671
Panther DB PTHR15825
NCBI CDD KOG3483; Uncharacterized conserved protein
KEGG Orthology K12162; ubiquitin-fold modifier 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77710 : -
RAP-DB (Rice) LOC_Os01g73140.1 : ubiquitin-fold modifier 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a025896
Brachypodium KQK11671
Barley HORVU3Hr1G111740.2 , HORVU3Hr1G111740.1
Wheat TraesCS3A02G507600 , TraesCS3D02G515200 , TraesCS3B02G576000
Populus -


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cDNA sequences
Sobic.003G436500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
2 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
3 Sobic.002G400400 choline transporter-related, putative, expressed -
4 Sobic.001G147100 pre-rRNA-processing protein TSR2, putative, expressed K14800: pre-rRNA-processing protein TSR2
5 Sobic.005G187500 GRF-interacting factor 2, putative, expressed -
6 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
7 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
8 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
9 Sobic.002G129200 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
10 Sobic.001G206300 dof zinc finger domain containing protein, putative, expressed -
11 Sobic.009G149800 subtilisin N-terminal Region family protein, expressed -
12 Sobic.002G277300 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
13 Sobic.002G204000 26S proteasome non-ATPase regulatory subunit 9, putative, expressed K06693: PSMD9, 26S proteasome regulatory subunit N4
14 Sobic.002G378401 - -
15 Sobic.009G127300 pentatricopeptide repeat-containing protein, putative, expressed -
16 Sobic.007G034600 U box protein 8, putative, expressed -
17 Sobic.009G187300 allyl alcohol dehydrogenase, putative, expressed -
18 Sobic.010G220900 thioredoxin, putative, expressed K03671: thioredoxin 1
19 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
20 Sobic.004G242100 expressed protein -


Gene co-expression network
sample Sobic003G436500 Sobic003G436500 Sobic002G359900 Sobic002G359900 Sobic003G436500--Sobic002G359900 Sobic003G031200 Sobic003G031200 Sobic003G436500--Sobic003G031200 Sobic002G400400 Sobic002G400400 Sobic003G436500--Sobic002G400400 Sobic001G147100 Sobic001G147100 Sobic003G436500--Sobic001G147100 Sobic005G187500 Sobic005G187500 Sobic003G436500--Sobic005G187500 Sobic010G253100 Sobic010G253100 Sobic003G436500--Sobic010G253100 Sobic004G028800 Sobic004G028800 Sobic003G436500--Sobic004G028800 Sobic008G160500 Sobic008G160500 Sobic003G436500--Sobic008G160500 Sobic002G129200 Sobic002G129200 Sobic003G436500--Sobic002G129200 Sobic002G359900--Sobic010G253100 Sobic002G359900--Sobic003G436500 Sobic006G261100 Sobic006G261100 Sobic002G359900--Sobic006G261100 Sobic006G120800 Sobic006G120800 Sobic002G359900--Sobic006G120800 Sobic002G359900--Sobic003G031200 Sobic001G458200 Sobic001G458200 Sobic002G359900--Sobic001G458200 Sobic002G403200 Sobic002G403200 Sobic002G359900--Sobic002G403200 Sobic001G038100 Sobic001G038100 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000 Sobic010G088300 Sobic010G088300 Sobic003G031200--Sobic010G088300 Sobic004G242100 Sobic004G242100 Sobic003G031200--Sobic004G242100 Sobic003G031200--Sobic002G359900 Sobic008G111700 Sobic008G111700 Sobic003G031200--Sobic008G111700 Sobic003G031200--Sobic002G129200 Sobic002G044000 Sobic002G044000 Sobic003G031200--Sobic002G044000 Sobic003G043400 Sobic003G043400 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic001G033400 Sobic001G033400 Sobic002G400400--Sobic001G033400 Sobic002G103700 Sobic002G103700 Sobic002G400400--Sobic002G103700 Sobic002G400400--Sobic003G436500 Sobic002G400400--Sobic008G160500 Sobic001G310700 Sobic001G310700 Sobic002G400400--Sobic001G310700 Sobic003G159500 Sobic003G159500 Sobic002G400400--Sobic003G159500 Sobic007G050300 Sobic007G050300 Sobic002G400400--Sobic007G050300 Sobic010G207400 Sobic010G207400 Sobic002G400400--Sobic010G207400 Sobic001G039500 Sobic001G039500 Sobic002G400400--Sobic001G039500 Sobic003G424800 Sobic003G424800 Sobic001G147100--Sobic003G424800 Sobic001G404100 Sobic001G404100 Sobic001G147100--Sobic001G404100 Sobic006G011000 Sobic006G011000 Sobic001G147100--Sobic006G011000 Sobic009G187300 Sobic009G187300 Sobic001G147100--Sobic009G187300 Sobic002G406600 Sobic002G406600 Sobic001G147100--Sobic002G406600 Sobic004G060600 Sobic004G060600 Sobic001G147100--Sobic004G060600 Sobic001G408100 Sobic001G408100 Sobic001G147100--Sobic001G408100 Sobic009G104000 Sobic009G104000 Sobic001G147100--Sobic009G104000 Sobic002G266800 Sobic002G266800 Sobic001G147100--Sobic002G266800 Sobic005G187500--Sobic001G038100 Sobic005G187500--Sobic002G204000 Sobic003G405700 Sobic003G405700 Sobic005G187500--Sobic003G405700 Sobic001G507400 Sobic001G507400 Sobic005G187500--Sobic001G507400 Sobic005G187500--Sobic006G120800 Sobic006G183000 Sobic006G183000 Sobic005G187500--Sobic006G183000 Sobic003G307900 Sobic003G307900 Sobic005G187500--Sobic003G307900 Sobic005G187500--Sobic002G359900 Sobic001G199300 Sobic001G199300 Sobic005G187500--Sobic001G199300 Sobic010G253100--Sobic002G359900 Sobic010G253100--Sobic001G038100 Sobic010G253100--Sobic006G120800 Sobic010G253100--Sobic006G261100 Sobic010G253100--Sobic001G458200 Sobic010G253100--Sobic002G204000 Sobic002G276900 Sobic002G276900 Sobic010G253100--Sobic002G276900 Sobic010G253100--Sobic002G403200 Sobic003G192000 Sobic003G192000 Sobic010G253100--Sobic003G192000 Sobic006G244500 Sobic006G244500 Sobic004G028800--Sobic006G244500 Sobic001G488200 Sobic001G488200 Sobic004G028800--Sobic001G488200 Sobic006G151001 Sobic006G151001 Sobic004G028800--Sobic006G151001 Sobic004G155300 Sobic004G155300 Sobic004G028800--Sobic004G155300 Sobic003G062200 Sobic003G062200 Sobic004G028800--Sobic003G062200 Sobic004G345100 Sobic004G345100 Sobic004G028800--Sobic004G345100 Sobic009G009800 Sobic009G009800 Sobic004G028800--Sobic009G009800 Sobic004G028800--Sobic002G359900 Sobic006G066600 Sobic006G066600 Sobic004G028800--Sobic006G066600 Sobic003G062400 Sobic003G062400 Sobic008G160500--Sobic003G062400 Sobic001G005600 Sobic001G005600 Sobic008G160500--Sobic001G005600 Sobic009G030400 Sobic009G030400 Sobic008G160500--Sobic009G030400 Sobic008G160500--Sobic006G120800 Sobic008G160500--Sobic002G359900 Sobic008G160500--Sobic002G403200 Sobic003G004500 Sobic003G004500 Sobic008G160500--Sobic003G004500 Sobic009G258400 Sobic009G258400 Sobic008G160500--Sobic009G258400 Sobic008G160500--Sobic001G033400 Sobic002G129200--Sobic003G031200 Sobic010G220900 Sobic010G220900 Sobic002G129200--Sobic010G220900 Sobic002G129200--Sobic002G359900 Sobic002G129200--Sobic006G011000 Sobic002G129200--Sobic003G436500 Sobic001G382200 Sobic001G382200 Sobic002G129200--Sobic001G382200 Sobic004G010700 Sobic004G010700 Sobic002G129200--Sobic004G010700 Sobic002G083800 Sobic002G083800 Sobic002G129200--Sobic002G083800 Sobic009G201800 Sobic009G201800 Sobic002G129200--Sobic009G201800
Octagon: transcription factors


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