Gene annotation
Transcriptome id Sobic.006G281200.1
Synonym Sb06g034150
Functional annotation csAtPR5, putative, expressed
UniProt C5YB57
Pfam -
Panther DB PTHR33065 PTHR33065:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g04590.1 : csAtPR5, putative, expressed
MaizeGDB (Corn) Zm00025a057464 , Zm00025a057439
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G281200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
2 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
4 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
5 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
6 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
7 Sobic.008G100000 40S ribosomal protein S9-2, putative, expressed K02997: RP-S9e, small subunit ribosomal protein S9e
8 Sobic.003G367900 LSM domain containing protein, expressed K12622: U6 snRNA-associated Sm-like protein LSm3
9 Sobic.009G130400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
10 Sobic.008G127500 expressed protein -
11 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
12 Sobic.010G013900 DAG protein, chloroplast precursor, putative, expressed -
13 Sobic.002G241500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
14 Sobic.009G168000 selT-like protein precursor, putative, expressed -
15 Sobic.003G015400 ribosomal protein S6 family protein, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
16 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
17 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
18 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
19 Sobic.003G117300 LSM domain containing protein, expressed K12623: U6 snRNA-associated Sm-like protein LSm4
20 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1


Gene co-expression network
sample Sobic006G281200 Sobic006G281200 Sobic001G428100 Sobic001G428100 Sobic006G281200--Sobic001G428100 Sobic003G003000 Sobic003G003000 Sobic006G281200--Sobic003G003000 Sobic001G025600 Sobic001G025600 Sobic006G281200--Sobic001G025600 Sobic009G131100 Sobic009G131100 Sobic006G281200--Sobic009G131100 Sobic007G091000 Sobic007G091000 Sobic006G281200--Sobic007G091000 Sobic001G404100 Sobic001G404100 Sobic006G281200--Sobic001G404100 Sobic008G100000 Sobic008G100000 Sobic006G281200--Sobic008G100000 Sobic003G367900 Sobic003G367900 Sobic006G281200--Sobic003G367900 Sobic009G130400 Sobic009G130400 Sobic006G281200--Sobic009G130400 Sobic001G428100--Sobic006G281200 Sobic001G502200 Sobic001G502200 Sobic001G428100--Sobic001G502200 Sobic001G501200 Sobic001G501200 Sobic001G428100--Sobic001G501200 Sobic004G060600 Sobic004G060600 Sobic001G428100--Sobic004G060600 Sobic009G198500 Sobic009G198500 Sobic001G428100--Sobic009G198500 Sobic009G004600 Sobic009G004600 Sobic001G428100--Sobic009G004600 Sobic003G440800 Sobic003G440800 Sobic001G428100--Sobic003G440800 Sobic001G315500 Sobic001G315500 Sobic001G428100--Sobic001G315500 Sobic003G117300 Sobic003G117300 Sobic001G428100--Sobic003G117300 Sobic001G129400 Sobic001G129400 Sobic003G003000--Sobic001G129400 Sobic001G132900 Sobic001G132900 Sobic003G003000--Sobic001G132900 Sobic003G003000--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic003G003000--Sobic010G018000 Sobic001G008800 Sobic001G008800 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic004G103700 Sobic004G103700 Sobic001G025600--Sobic004G103700 Sobic001G172000 Sobic001G172000 Sobic001G025600--Sobic001G172000 Sobic001G481700 Sobic001G481700 Sobic001G025600--Sobic001G481700 Sobic003G129800 Sobic003G129800 Sobic001G025600--Sobic003G129800 Sobic001G513500 Sobic001G513500 Sobic001G025600--Sobic001G513500 Sobic003G442400 Sobic003G442400 Sobic001G025600--Sobic003G442400 Sobic004G224900 Sobic004G224900 Sobic001G025600--Sobic004G224900 Sobic001G018800 Sobic001G018800 Sobic001G025600--Sobic001G018800 Sobic003G287300 Sobic003G287300 Sobic001G025600--Sobic003G287300 Sobic001G536500 Sobic001G536500 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic009G131100--Sobic004G060600 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic003G277000 Sobic003G277000 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic009G131100--Sobic006G281200 Sobic007G091000--Sobic002G078400 Sobic003G362400 Sobic003G362400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic003G305100 Sobic003G305100 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic007G091000--Sobic001G025600 Sobic007G091000--Sobic003G277000 Sobic002G341800 Sobic002G341800 Sobic001G404100--Sobic002G341800 Sobic001G404100--Sobic001G481700 Sobic001G404100--Sobic001G502200 Sobic008G137600 Sobic008G137600 Sobic001G404100--Sobic008G137600 Sobic009G104000 Sobic009G104000 Sobic001G404100--Sobic009G104000 Sobic001G096100 Sobic001G096100 Sobic001G404100--Sobic001G096100 Sobic002G428200 Sobic002G428200 Sobic001G404100--Sobic002G428200 Sobic009G212300 Sobic009G212300 Sobic001G404100--Sobic009G212300 Sobic006G252200 Sobic006G252200 Sobic001G404100--Sobic006G252200 Sobic008G098800 Sobic008G098800 Sobic008G100000--Sobic008G098800 Sobic001G510800 Sobic001G510800 Sobic008G100000--Sobic001G510800 Sobic001G058900 Sobic001G058900 Sobic008G100000--Sobic001G058900 Sobic008G094600 Sobic008G094600 Sobic008G100000--Sobic008G094600 Sobic004G002350 Sobic004G002350 Sobic008G100000--Sobic004G002350 Sobic010G005300 Sobic010G005300 Sobic008G100000--Sobic010G005300 Sobic002G286900 Sobic002G286900 Sobic008G100000--Sobic002G286900 Sobic002G304900 Sobic002G304900 Sobic008G100000--Sobic002G304900 Sobic008G108601 Sobic008G108601 Sobic008G100000--Sobic008G108601 Sobic003G367900--Sobic001G404100 Sobic006G052400 Sobic006G052400 Sobic003G367900--Sobic006G052400 Sobic003G367900--Sobic001G096100 Sobic003G367900--Sobic006G281200 Sobic003G127700 Sobic003G127700 Sobic003G367900--Sobic003G127700 Sobic002G331300 Sobic002G331300 Sobic003G367900--Sobic002G331300 Sobic004G175700 Sobic004G175700 Sobic003G367900--Sobic004G175700 Sobic009G258600 Sobic009G258600 Sobic003G367900--Sobic009G258600 Sobic003G367900--Sobic008G100000 Sobic009G130400--Sobic001G404100 Sobic009G130400--Sobic001G096100 Sobic009G130400--Sobic006G281200 Sobic008G058300 Sobic008G058300 Sobic009G130400--Sobic008G058300 Sobic010G013900 Sobic010G013900 Sobic009G130400--Sobic010G013900 Sobic003G028100 Sobic003G028100 Sobic009G130400--Sobic003G028100 Sobic009G130400--Sobic001G502200 Sobic009G130400--Sobic002G341800 Sobic004G248900 Sobic004G248900 Sobic009G130400--Sobic004G248900
Octagon: transcription factors


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