Gene annotation
Transcriptome id Sobic.004G225300.1
Synonym Sb04g026960
Functional annotation e2f-associated phosphoprotein, putative, expressed
UniProt C5XY72
Pfam PF10238
Panther DB PTHR15967
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08320 : -
RAP-DB (Rice) LOC_Os02g42374.1 : e2f-associated phosphoprotein, putative, expressed
MaizeGDB (Corn) Zm00025a021019
Brachypodium KQK00473
Barley HORVU6Hr1G059860.1 , HORVU6Hr1G059860.2 , HORVU6Hr1G059860.3
Wheat TraesCS6D02G215900 , TraesCS6A02G232900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
2 Sobic.001G422700 "similar to Zinc finger family protein, putative, expressed"(PubMedID : 29862293)@Salt and drought-induced ring finger 1(PubMedID : 26320239)@zinc finger, C3HC4 type domain containing protein, expressed K16283: E3 ubiquitin-protein ligase SDIR1
3 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
4 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
5 Sobic.009G056300 PHD finger protein, putative, expressed -
6 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2
7 Sobic.002G139000 OsFBX237 - F-box domain containing protein, expressed -
8 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
9 Sobic.006G179800 HMG1/2, putative, expressed -
10 Sobic.001G459100 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
11 Sobic.001G329300 expressed protein -
12 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
13 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
14 Sobic.001G132900 expressed protein -
15 Sobic.003G119400 PUR ALPHA-1, putative, expressed -
16 Sobic.001G041200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09567: PPIH, peptidyl-prolyl isomerase H (cyclophilin H)
17 Sobic.002G268400 expressed protein -
18 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
19 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
20 Sobic.001G080000 expressed protein -


Gene co-expression network
sample Sobic004G225300 Sobic004G225300 Sobic004G027000 Sobic004G027000 Sobic004G225300--Sobic004G027000 Sobic001G422700 Sobic001G422700 Sobic004G225300--Sobic001G422700 Sobic002G394800 Sobic002G394800 Sobic004G225300--Sobic002G394800 Sobic004G206300 Sobic004G206300 Sobic004G225300--Sobic004G206300 Sobic009G056300 Sobic009G056300 Sobic004G225300--Sobic009G056300 Sobic004G212700 Sobic004G212700 Sobic004G225300--Sobic004G212700 Sobic002G139000 Sobic002G139000 Sobic004G225300--Sobic002G139000 Sobic006G252100 Sobic006G252100 Sobic004G225300--Sobic006G252100 Sobic006G179800 Sobic006G179800 Sobic004G225300--Sobic006G179800 Sobic004G027000--Sobic004G225300 Sobic004G027000--Sobic004G206300 Sobic004G027000--Sobic002G139000 Sobic004G027000--Sobic009G056300 Sobic004G027000--Sobic002G394800 Sobic004G027000--Sobic001G422700 Sobic001G280400 Sobic001G280400 Sobic004G027000--Sobic001G280400 Sobic005G164500 Sobic005G164500 Sobic004G027000--Sobic005G164500 Sobic004G184000 Sobic004G184000 Sobic004G027000--Sobic004G184000 Sobic001G422700--Sobic002G139000 Sobic001G010600 Sobic001G010600 Sobic001G422700--Sobic001G010600 Sobic001G507400 Sobic001G507400 Sobic001G422700--Sobic001G507400 Sobic003G259400 Sobic003G259400 Sobic001G422700--Sobic003G259400 Sobic003G247900 Sobic003G247900 Sobic001G422700--Sobic003G247900 Sobic001G422700--Sobic004G027000 Sobic001G422700--Sobic004G225300 Sobic001G329300 Sobic001G329300 Sobic001G422700--Sobic001G329300 Sobic002G272600 Sobic002G272600 Sobic001G422700--Sobic002G272600 Sobic006G233300 Sobic006G233300 Sobic002G394800--Sobic006G233300 Sobic002G143900 Sobic002G143900 Sobic002G394800--Sobic002G143900 Sobic006G233000 Sobic006G233000 Sobic002G394800--Sobic006G233000 Sobic002G280600 Sobic002G280600 Sobic002G394800--Sobic002G280600 Sobic006G245700 Sobic006G245700 Sobic002G394800--Sobic006G245700 Sobic006G272200 Sobic006G272200 Sobic002G394800--Sobic006G272200 Sobic001G370300 Sobic001G370300 Sobic002G394800--Sobic001G370300 Sobic004G249300 Sobic004G249300 Sobic002G394800--Sobic004G249300 Sobic002G430900 Sobic002G430900 Sobic002G394800--Sobic002G430900 Sobic004G206300--Sobic004G212700 Sobic004G206300--Sobic004G027000 Sobic004G206300--Sobic009G056300 Sobic004G129600 Sobic004G129600 Sobic004G206300--Sobic004G129600 Sobic009G031500 Sobic009G031500 Sobic004G206300--Sobic009G031500 Sobic008G125000 Sobic008G125000 Sobic004G206300--Sobic008G125000 Sobic004G206300--Sobic004G225300 Sobic001G335500 Sobic001G335500 Sobic004G206300--Sobic001G335500 Sobic001G099800 Sobic001G099800 Sobic004G206300--Sobic001G099800 Sobic009G056300--Sobic008G125000 Sobic009G056300--Sobic004G206300 Sobic002G224700 Sobic002G224700 Sobic009G056300--Sobic002G224700 Sobic009G194300 Sobic009G194300 Sobic009G056300--Sobic009G194300 Sobic001G041200 Sobic001G041200 Sobic009G056300--Sobic001G041200 Sobic001G080000 Sobic001G080000 Sobic009G056300--Sobic001G080000 Sobic009G056300--Sobic004G027000 Sobic009G056300--Sobic002G394800 Sobic001G152000 Sobic001G152000 Sobic009G056300--Sobic001G152000 Sobic004G212700--Sobic004G129600 Sobic004G212700--Sobic004G206300 Sobic004G019600 Sobic004G019600 Sobic004G212700--Sobic004G019600 Sobic004G212700--Sobic006G245700 Sobic001G346300 Sobic001G346300 Sobic004G212700--Sobic001G346300 Sobic003G274400 Sobic003G274400 Sobic004G212700--Sobic003G274400 Sobic010G154000 Sobic010G154000 Sobic004G212700--Sobic010G154000 Sobic004G212700--Sobic002G394800 Sobic004G198900 Sobic004G198900 Sobic004G212700--Sobic004G198900 Sobic002G139000--Sobic004G027000 Sobic002G139000--Sobic001G422700 Sobic001G217100 Sobic001G217100 Sobic002G139000--Sobic001G217100 Sobic006G167300 Sobic006G167300 Sobic002G139000--Sobic006G167300 Sobic006G067700 Sobic006G067700 Sobic002G139000--Sobic006G067700 Sobic002G139000--Sobic009G056300 Sobic001G296800 Sobic001G296800 Sobic002G139000--Sobic001G296800 Sobic010G217100 Sobic010G217100 Sobic002G139000--Sobic010G217100 Sobic002G139000--Sobic004G225300 Sobic002G268400 Sobic002G268400 Sobic006G252100--Sobic002G268400 Sobic006G252100--Sobic001G152000 Sobic009G033900 Sobic009G033900 Sobic006G252100--Sobic009G033900 Sobic006G216000 Sobic006G216000 Sobic006G252100--Sobic006G216000 Sobic003G220700 Sobic003G220700 Sobic006G252100--Sobic003G220700 Sobic006G094600 Sobic006G094600 Sobic006G252100--Sobic006G094600 Sobic001G226100 Sobic001G226100 Sobic006G252100--Sobic001G226100 Sobic004G074300 Sobic004G074300 Sobic006G252100--Sobic004G074300 Sobic006G252100--Sobic001G370300 Sobic006G179800--Sobic004G212700 Sobic002G113900 Sobic002G113900 Sobic006G179800--Sobic002G113900 Sobic001G459100 Sobic001G459100 Sobic006G179800--Sobic001G459100 Sobic004G226800 Sobic004G226800 Sobic006G179800--Sobic004G226800 Sobic002G262000 Sobic002G262000 Sobic006G179800--Sobic002G262000 Sobic006G179800--Sobic001G329300 Sobic006G179800--Sobic004G225300 Sobic006G270900 Sobic006G270900 Sobic006G179800--Sobic006G270900 Sobic003G278300 Sobic003G278300 Sobic006G179800--Sobic003G278300
Octagon: transcription factors


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