Gene annotation
Transcriptome id Sobic.002G139000.2,Sobic.002G139000.1
Synonym Sb02g012605
Functional annotation OsFBX237 - F-box domain containing protein, expressed
UniProt C5X6M6
Pfam -
Panther DB PTHR32133 PTHR32133:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35050.1 : OsFBX237 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G139000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
2 Sobic.001G422700 "similar to Zinc finger family protein, putative, expressed"(PubMedID : 29862293)@Salt and drought-induced ring finger 1(PubMedID : 26320239)@zinc finger, C3HC4 type domain containing protein, expressed K16283: E3 ubiquitin-protein ligase SDIR1
3 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
4 Sobic.006G167300 AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.006G067700 "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)"(PubMedID : 28676627)@AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.009G056300 PHD finger protein, putative, expressed -
7 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
8 Sobic.010G217100 ubiquitin-conjugating enzyme, putative, expressed K10583: UBE2S, ubiquitin-conjugating enzyme E2 S
9 Sobic.004G225300 e2f-associated phosphoprotein, putative, expressed -
10 Sobic.001G226100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
11 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
12 Sobic.002G430900 PWWP domain containing protein, expressed -
13 Sobic.004G011000 expressed protein K11883: RNA-binding protein NOB1
14 Sobic.006G104100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
15 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
16 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
17 Sobic.002G425200 expressed protein -
18 Sobic.001G231200 expressed protein -
19 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
20 Sobic.003G077500 expressed protein -


Gene co-expression network
sample Sobic002G139000 Sobic002G139000 Sobic004G027000 Sobic004G027000 Sobic002G139000--Sobic004G027000 Sobic001G422700 Sobic001G422700 Sobic002G139000--Sobic001G422700 Sobic001G217100 Sobic001G217100 Sobic002G139000--Sobic001G217100 Sobic006G167300 Sobic006G167300 Sobic002G139000--Sobic006G167300 Sobic006G067700 Sobic006G067700 Sobic002G139000--Sobic006G067700 Sobic009G056300 Sobic009G056300 Sobic002G139000--Sobic009G056300 Sobic001G296800 Sobic001G296800 Sobic002G139000--Sobic001G296800 Sobic010G217100 Sobic010G217100 Sobic002G139000--Sobic010G217100 Sobic004G225300 Sobic004G225300 Sobic002G139000--Sobic004G225300 Sobic004G027000--Sobic004G225300 Sobic004G206300 Sobic004G206300 Sobic004G027000--Sobic004G206300 Sobic004G027000--Sobic002G139000 Sobic004G027000--Sobic009G056300 Sobic002G394800 Sobic002G394800 Sobic004G027000--Sobic002G394800 Sobic004G027000--Sobic001G422700 Sobic001G280400 Sobic001G280400 Sobic004G027000--Sobic001G280400 Sobic005G164500 Sobic005G164500 Sobic004G027000--Sobic005G164500 Sobic004G184000 Sobic004G184000 Sobic004G027000--Sobic004G184000 Sobic001G422700--Sobic002G139000 Sobic001G010600 Sobic001G010600 Sobic001G422700--Sobic001G010600 Sobic001G507400 Sobic001G507400 Sobic001G422700--Sobic001G507400 Sobic003G259400 Sobic003G259400 Sobic001G422700--Sobic003G259400 Sobic003G247900 Sobic003G247900 Sobic001G422700--Sobic003G247900 Sobic001G422700--Sobic004G027000 Sobic001G422700--Sobic004G225300 Sobic001G329300 Sobic001G329300 Sobic001G422700--Sobic001G329300 Sobic002G272600 Sobic002G272600 Sobic001G422700--Sobic002G272600 Sobic004G229100 Sobic004G229100 Sobic001G217100--Sobic004G229100 Sobic003G132700 Sobic003G132700 Sobic001G217100--Sobic003G132700 Sobic001G217100--Sobic006G067700 Sobic002G223300 Sobic002G223300 Sobic001G217100--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic001G217100--Sobic002G334600 Sobic009G164900 Sobic009G164900 Sobic001G217100--Sobic009G164900 Sobic001G019200 Sobic001G019200 Sobic001G217100--Sobic001G019200 Sobic002G430900 Sobic002G430900 Sobic001G217100--Sobic002G430900 Sobic002G002100 Sobic002G002100 Sobic001G217100--Sobic002G002100 Sobic006G167300--Sobic002G002100 Sobic004G255800 Sobic004G255800 Sobic006G167300--Sobic004G255800 Sobic007G210900 Sobic007G210900 Sobic006G167300--Sobic007G210900 Sobic004G199700 Sobic004G199700 Sobic006G167300--Sobic004G199700 Sobic001G157100 Sobic001G157100 Sobic006G167300--Sobic001G157100 Sobic008G086200 Sobic008G086200 Sobic006G167300--Sobic008G086200 Sobic002G348700 Sobic002G348700 Sobic006G167300--Sobic002G348700 Sobic001G047200 Sobic001G047200 Sobic006G167300--Sobic001G047200 Sobic006G167300--Sobic001G217100 Sobic003G104100 Sobic003G104100 Sobic006G067700--Sobic003G104100 Sobic009G148200 Sobic009G148200 Sobic006G067700--Sobic009G148200 Sobic001G395200 Sobic001G395200 Sobic006G067700--Sobic001G395200 Sobic010G065800 Sobic010G065800 Sobic006G067700--Sobic010G065800 Sobic006G067700--Sobic001G217100 Sobic003G323300 Sobic003G323300 Sobic006G067700--Sobic003G323300 Sobic002G098500 Sobic002G098500 Sobic006G067700--Sobic002G098500 Sobic006G262100 Sobic006G262100 Sobic006G067700--Sobic006G262100 Sobic008G136100 Sobic008G136100 Sobic006G067700--Sobic008G136100 Sobic008G125000 Sobic008G125000 Sobic009G056300--Sobic008G125000 Sobic009G056300--Sobic004G206300 Sobic002G224700 Sobic002G224700 Sobic009G056300--Sobic002G224700 Sobic009G194300 Sobic009G194300 Sobic009G056300--Sobic009G194300 Sobic001G041200 Sobic001G041200 Sobic009G056300--Sobic001G041200 Sobic001G080000 Sobic001G080000 Sobic009G056300--Sobic001G080000 Sobic009G056300--Sobic004G027000 Sobic009G056300--Sobic002G394800 Sobic001G152000 Sobic001G152000 Sobic009G056300--Sobic001G152000 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G487200 Sobic001G487200 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic006G104100 Sobic006G104100 Sobic010G217100--Sobic006G104100 Sobic010G144900 Sobic010G144900 Sobic010G217100--Sobic010G144900 Sobic009G124200 Sobic009G124200 Sobic010G217100--Sobic009G124200 Sobic010G138500 Sobic010G138500 Sobic010G217100--Sobic010G138500 Sobic003G003700 Sobic003G003700 Sobic010G217100--Sobic003G003700 Sobic009G224600 Sobic009G224600 Sobic010G217100--Sobic009G224600 Sobic001G468500 Sobic001G468500 Sobic010G217100--Sobic001G468500 Sobic001G226100 Sobic001G226100 Sobic010G217100--Sobic001G226100 Sobic006G191700 Sobic006G191700 Sobic010G217100--Sobic006G191700 Sobic004G225300--Sobic004G027000 Sobic004G225300--Sobic001G422700 Sobic004G225300--Sobic002G394800 Sobic004G225300--Sobic004G206300 Sobic004G225300--Sobic009G056300 Sobic004G212700 Sobic004G212700 Sobic004G225300--Sobic004G212700 Sobic004G225300--Sobic002G139000 Sobic006G252100 Sobic006G252100 Sobic004G225300--Sobic006G252100 Sobic006G179800 Sobic006G179800 Sobic004G225300--Sobic006G179800
Octagon: transcription factors


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