Gene annotation
Transcriptome id Sobic.006G067700.1,Sobic.006G067700.2
Synonym Sb06g015430, dwarf2, Dw2
Functional annotation "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)" (PubMedID : 28676627)
AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt C5YFT3
Pfam PF07714 PF00069
Panther DB PTHR24351 PTHR24351:SF88
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G52890 : KCBP-interacting protein kinase
RAP-DB (Rice) LOC_Os12g29580.1 : AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a011537 , Zm00025a055991
Brachypodium KQJ82488
Barley HORVU2Hr1G072580.1 , HORVU2Hr1G072580.2 , HORVU2Hr1G072580.3 , HORVU2Hr1G072580.4 , HORVU2Hr1G072580.5
Wheat TraesCS2A02G292800 , TraesCS2B02G309900 , TraesCS2D02G291200
Populus -


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cDNA sequences
Sobic.006G067700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G104100 expressed protein -
2 Sobic.009G148200 deoxynucleoside kinase family, putative, expressed -
3 Sobic.001G395200 cyclin-related protein, putative, expressed -
4 Sobic.010G065800 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
5 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
6 Sobic.003G323300 expressed protein -
7 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
8 Sobic.006G262100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
9 Sobic.008G136100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
10 Sobic.001G079900 expressed protein -
11 Sobic.009G141700 expressed protein -
12 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
13 Sobic.003G341700 exo70 exocyst complex subunit domain containing protein, expressed -
14 Sobic.010G050700 protein kinase, putative, expressed -
15 Sobic.005G163400 dnaJ domain containing protein, expressed -
16 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
17 Sobic.004G199200 expressed protein K10858: DNA mismatch repair protein PMS2
18 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
19 Sobic.002G425200 expressed protein -
20 Sobic.010G024500 expressed protein -


Gene co-expression network
sample Sobic006G067700 Sobic006G067700 Sobic003G104100 Sobic003G104100 Sobic006G067700--Sobic003G104100 Sobic009G148200 Sobic009G148200 Sobic006G067700--Sobic009G148200 Sobic001G395200 Sobic001G395200 Sobic006G067700--Sobic001G395200 Sobic010G065800 Sobic010G065800 Sobic006G067700--Sobic010G065800 Sobic001G217100 Sobic001G217100 Sobic006G067700--Sobic001G217100 Sobic003G323300 Sobic003G323300 Sobic006G067700--Sobic003G323300 Sobic002G098500 Sobic002G098500 Sobic006G067700--Sobic002G098500 Sobic006G262100 Sobic006G262100 Sobic006G067700--Sobic006G262100 Sobic008G136100 Sobic008G136100 Sobic006G067700--Sobic008G136100 Sobic003G104100--Sobic001G395200 Sobic008G052300 Sobic008G052300 Sobic003G104100--Sobic008G052300 Sobic005G163400 Sobic005G163400 Sobic003G104100--Sobic005G163400 Sobic001G425700 Sobic001G425700 Sobic003G104100--Sobic001G425700 Sobic003G104100--Sobic006G067700 Sobic010G024500 Sobic010G024500 Sobic003G104100--Sobic010G024500 Sobic004G179800 Sobic004G179800 Sobic003G104100--Sobic004G179800 Sobic006G084300 Sobic006G084300 Sobic003G104100--Sobic006G084300 Sobic009G259900 Sobic009G259900 Sobic003G104100--Sobic009G259900 Sobic009G148200--Sobic006G067700 Sobic009G148200--Sobic003G104100 Sobic010G050700 Sobic010G050700 Sobic009G148200--Sobic010G050700 Sobic004G199200 Sobic004G199200 Sobic009G148200--Sobic004G199200 Sobic010G277200 Sobic010G277200 Sobic009G148200--Sobic010G277200 Sobic001G453500 Sobic001G453500 Sobic009G148200--Sobic001G453500 Sobic002G216600 Sobic002G216600 Sobic009G148200--Sobic002G216600 Sobic009G066400 Sobic009G066400 Sobic009G148200--Sobic009G066400 Sobic001G368300 Sobic001G368300 Sobic009G148200--Sobic001G368300 Sobic001G395200--Sobic003G104100 Sobic001G395200--Sobic009G259900 Sobic002G219900 Sobic002G219900 Sobic001G395200--Sobic002G219900 Sobic010G149600 Sobic010G149600 Sobic001G395200--Sobic010G149600 Sobic003G351900 Sobic003G351900 Sobic001G395200--Sobic003G351900 Sobic006G008300 Sobic006G008300 Sobic001G395200--Sobic006G008300 Sobic007G125700 Sobic007G125700 Sobic001G395200--Sobic007G125700 Sobic004G043750 Sobic004G043750 Sobic001G395200--Sobic004G043750 Sobic001G079900 Sobic001G079900 Sobic001G395200--Sobic001G079900 Sobic010G065800--Sobic008G136100 Sobic001G408300 Sobic001G408300 Sobic010G065800--Sobic001G408300 Sobic010G065800--Sobic006G067700 Sobic001G143600 Sobic001G143600 Sobic010G065800--Sobic001G143600 Sobic009G010300 Sobic009G010300 Sobic010G065800--Sobic009G010300 Sobic010G065800--Sobic002G219900 Sobic001G385400 Sobic001G385400 Sobic010G065800--Sobic001G385400 Sobic006G056000 Sobic006G056000 Sobic010G065800--Sobic006G056000 Sobic010G065800--Sobic009G148200 Sobic004G229100 Sobic004G229100 Sobic001G217100--Sobic004G229100 Sobic003G132700 Sobic003G132700 Sobic001G217100--Sobic003G132700 Sobic001G217100--Sobic006G067700 Sobic002G223300 Sobic002G223300 Sobic001G217100--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic001G217100--Sobic002G334600 Sobic009G164900 Sobic009G164900 Sobic001G217100--Sobic009G164900 Sobic001G019200 Sobic001G019200 Sobic001G217100--Sobic001G019200 Sobic002G430900 Sobic002G430900 Sobic001G217100--Sobic002G430900 Sobic002G002100 Sobic002G002100 Sobic001G217100--Sobic002G002100 Sobic009G141700 Sobic009G141700 Sobic003G323300--Sobic009G141700 Sobic008G080500 Sobic008G080500 Sobic003G323300--Sobic008G080500 Sobic003G323300--Sobic006G067700 Sobic003G323300--Sobic007G125700 Sobic003G323300--Sobic001G395200 Sobic003G323300--Sobic002G430900 Sobic003G323300--Sobic009G259900 Sobic003G323300--Sobic003G104100 Sobic003G323300--Sobic010G149600 Sobic008G038200 Sobic008G038200 Sobic002G098500--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic002G098500--Sobic007G065300 Sobic003G096300 Sobic003G096300 Sobic002G098500--Sobic003G096300 Sobic005G204100 Sobic005G204100 Sobic002G098500--Sobic005G204100 Sobic010G135300 Sobic010G135300 Sobic002G098500--Sobic010G135300 Sobic010G020600 Sobic010G020600 Sobic002G098500--Sobic010G020600 Sobic002G098500--Sobic002G216600 Sobic001G221900 Sobic001G221900 Sobic002G098500--Sobic001G221900 Sobic007G032100 Sobic007G032100 Sobic002G098500--Sobic007G032100 Sobic004G144100 Sobic004G144100 Sobic006G262100--Sobic004G144100 Sobic006G262100--Sobic006G067700 Sobic001G494100 Sobic001G494100 Sobic006G262100--Sobic001G494100 Sobic002G162000 Sobic002G162000 Sobic006G262100--Sobic002G162000 Sobic006G262100--Sobic002G098500 Sobic006G262100--Sobic002G216600 Sobic006G257200 Sobic006G257200 Sobic006G262100--Sobic006G257200 Sobic006G262100--Sobic001G395200 Sobic002G143200 Sobic002G143200 Sobic006G262100--Sobic002G143200 Sobic008G136100--Sobic010G065800 Sobic007G142900 Sobic007G142900 Sobic008G136100--Sobic007G142900 Sobic008G136100--Sobic006G067700 Sobic004G168600 Sobic004G168600 Sobic008G136100--Sobic004G168600 Sobic008G136100--Sobic006G262100 Sobic009G259500 Sobic009G259500 Sobic008G136100--Sobic009G259500 Sobic008G042200 Sobic008G042200 Sobic008G136100--Sobic008G042200 Sobic006G110850 Sobic006G110850 Sobic008G136100--Sobic006G110850 Sobic008G136100--Sobic002G098500
Octagon: transcription factors


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