Gene annotation
Transcriptome id Sobic.010G050700.2,Sobic.010G050700.1
Synonym Sb10g004400
Functional annotation protein kinase, putative, expressed
UniProt A0A1W0VRI6 , C5Z4U0
Pfam PF00515 PF04564 PF13414 PF07714 PF04564 PF13414 PF07714
Panther DB PTHR27003 PTHR27003:SF99
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding GO:0016567protein ubiquitination GO:0004842ubiquitin-protein transferase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G45910 : U-box domain-containing protein kinase family protein
RAP-DB (Rice) LOC_Os06g06760.1,LOC_Os06g06760.3 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a049931 , Zm00025a022406
Brachypodium KQK19478 , KQK19479 , PNT76468
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
2 Sobic.009G148200 deoxynucleoside kinase family, putative, expressed -
3 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
4 Sobic.006G067700 "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)"(PubMedID : 28676627)@AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
6 Sobic.002G010800 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
7 Sobic.002G192500 ES43 protein, putative, expressed -
8 Sobic.004G227500 WD-40 repeat family protein, putative, expressed -
9 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
10 Sobic.009G011500 expressed protein -
11 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
12 Sobic.008G001300 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
13 Sobic.009G141700 expressed protein -
14 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
15 Sobic.007G043900 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
16 Sobic.002G157200 expressed protein -
17 Sobic.001G045700 "CESA3-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA2 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.009G015800 expressed protein -
19 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
20 Sobic.010G065800 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42


Gene co-expression network
sample Sobic010G050700 Sobic010G050700 Sobic006G056000 Sobic006G056000 Sobic010G050700--Sobic006G056000 Sobic009G148200 Sobic009G148200 Sobic010G050700--Sobic009G148200 Sobic002G380100 Sobic002G380100 Sobic010G050700--Sobic002G380100 Sobic006G067700 Sobic006G067700 Sobic010G050700--Sobic006G067700 Sobic001G367100 Sobic001G367100 Sobic010G050700--Sobic001G367100 Sobic002G010800 Sobic002G010800 Sobic010G050700--Sobic002G010800 Sobic002G192500 Sobic002G192500 Sobic010G050700--Sobic002G192500 Sobic004G227500 Sobic004G227500 Sobic010G050700--Sobic004G227500 Sobic002G334600 Sobic002G334600 Sobic010G050700--Sobic002G334600 Sobic003G353600 Sobic003G353600 Sobic006G056000--Sobic003G353600 Sobic002G076000 Sobic002G076000 Sobic006G056000--Sobic002G076000 Sobic005G084100 Sobic005G084100 Sobic006G056000--Sobic005G084100 Sobic004G111000 Sobic004G111000 Sobic006G056000--Sobic004G111000 Sobic002G079100 Sobic002G079100 Sobic006G056000--Sobic002G079100 Sobic001G138400 Sobic001G138400 Sobic006G056000--Sobic001G138400 Sobic004G285000 Sobic004G285000 Sobic006G056000--Sobic004G285000 Sobic006G047100 Sobic006G047100 Sobic006G056000--Sobic006G047100 Sobic006G210000 Sobic006G210000 Sobic006G056000--Sobic006G210000 Sobic009G148200--Sobic006G067700 Sobic003G104100 Sobic003G104100 Sobic009G148200--Sobic003G104100 Sobic009G148200--Sobic010G050700 Sobic004G199200 Sobic004G199200 Sobic009G148200--Sobic004G199200 Sobic010G277200 Sobic010G277200 Sobic009G148200--Sobic010G277200 Sobic001G453500 Sobic001G453500 Sobic009G148200--Sobic001G453500 Sobic002G216600 Sobic002G216600 Sobic009G148200--Sobic002G216600 Sobic009G066400 Sobic009G066400 Sobic009G148200--Sobic009G066400 Sobic001G368300 Sobic001G368300 Sobic009G148200--Sobic001G368300 Sobic002G380100--Sobic002G079100 Sobic004G119400 Sobic004G119400 Sobic002G380100--Sobic004G119400 Sobic008G017100 Sobic008G017100 Sobic002G380100--Sobic008G017100 Sobic006G111200 Sobic006G111200 Sobic002G380100--Sobic006G111200 Sobic001G448100 Sobic001G448100 Sobic002G380100--Sobic001G448100 Sobic003G185250 Sobic003G185250 Sobic002G380100--Sobic003G185250 Sobic003G070100 Sobic003G070100 Sobic002G380100--Sobic003G070100 Sobic002G380100--Sobic010G050700 Sobic009G096100 Sobic009G096100 Sobic002G380100--Sobic009G096100 Sobic006G067700--Sobic003G104100 Sobic006G067700--Sobic009G148200 Sobic001G395200 Sobic001G395200 Sobic006G067700--Sobic001G395200 Sobic010G065800 Sobic010G065800 Sobic006G067700--Sobic010G065800 Sobic001G217100 Sobic001G217100 Sobic006G067700--Sobic001G217100 Sobic003G323300 Sobic003G323300 Sobic006G067700--Sobic003G323300 Sobic002G098500 Sobic002G098500 Sobic006G067700--Sobic002G098500 Sobic006G262100 Sobic006G262100 Sobic006G067700--Sobic006G262100 Sobic008G136100 Sobic008G136100 Sobic006G067700--Sobic008G136100 Sobic010G279900 Sobic010G279900 Sobic001G367100--Sobic010G279900 Sobic001G315400 Sobic001G315400 Sobic001G367100--Sobic001G315400 Sobic001G245900 Sobic001G245900 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic008G080500 Sobic008G080500 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic004G128200 Sobic004G128200 Sobic001G367100--Sobic004G128200 Sobic001G367100--Sobic002G079100 Sobic003G077500 Sobic003G077500 Sobic001G367100--Sobic003G077500 Sobic002G010800--Sobic005G084100 Sobic002G423200 Sobic002G423200 Sobic002G010800--Sobic002G423200 Sobic002G049000 Sobic002G049000 Sobic002G010800--Sobic002G049000 Sobic001G303675 Sobic001G303675 Sobic002G010800--Sobic001G303675 Sobic001G094000 Sobic001G094000 Sobic002G010800--Sobic001G094000 Sobic006G052300 Sobic006G052300 Sobic002G010800--Sobic006G052300 Sobic007G043900 Sobic007G043900 Sobic002G010800--Sobic007G043900 Sobic002G010800--Sobic002G076000 Sobic002G010800--Sobic006G056000 Sobic002G192500--Sobic009G096100 Sobic002G192500--Sobic006G056000 Sobic002G192500--Sobic006G047100 Sobic002G192500--Sobic006G111200 Sobic002G192500--Sobic010G050700 Sobic002G192500--Sobic007G043900 Sobic008G056900 Sobic008G056900 Sobic002G192500--Sobic008G056900 Sobic001G087100 Sobic001G087100 Sobic002G192500--Sobic001G087100 Sobic001G485600 Sobic001G485600 Sobic002G192500--Sobic001G485600 Sobic006G022500 Sobic006G022500 Sobic004G227500--Sobic006G022500 Sobic002G316500 Sobic002G316500 Sobic004G227500--Sobic002G316500 Sobic010G046400 Sobic010G046400 Sobic004G227500--Sobic010G046400 Sobic001G494100 Sobic001G494100 Sobic004G227500--Sobic001G494100 Sobic004G135500 Sobic004G135500 Sobic004G227500--Sobic004G135500 Sobic010G173900 Sobic010G173900 Sobic004G227500--Sobic010G173900 Sobic004G227500--Sobic001G315400 Sobic004G227500--Sobic001G367100 Sobic004G227500--Sobic002G334600 Sobic002G223300 Sobic002G223300 Sobic002G334600--Sobic002G223300 Sobic009G030300 Sobic009G030300 Sobic002G334600--Sobic009G030300 Sobic007G139400 Sobic007G139400 Sobic002G334600--Sobic007G139400 Sobic007G188900 Sobic007G188900 Sobic002G334600--Sobic007G188900 Sobic003G132700 Sobic003G132700 Sobic002G334600--Sobic003G132700 Sobic002G089900 Sobic002G089900 Sobic002G334600--Sobic002G089900 Sobic003G354100 Sobic003G354100 Sobic002G334600--Sobic003G354100 Sobic009G044900 Sobic009G044900 Sobic002G334600--Sobic009G044900 Sobic002G157200 Sobic002G157200 Sobic002G334600--Sobic002G157200
Octagon: transcription factors


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