Gene annotation
Transcriptome id Sobic.002G010800.1,Sobic.002G010800.2
Synonym Sb02g001150, RPS3, RPM1
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1B6Q8M6 , A0A1B6Q8P0
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF556
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein,Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os06g17880.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7A02G040000 , TraesCS4A02G448000 , TraesCS4A02G447300 , TraesCS7A02G039700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
2 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
3 Sobic.002G049000 frigida, putative, expressed -
4 Sobic.001G303675 - -
5 Sobic.001G094000 expressed protein -
6 Sobic.006G052300 dnaJ domain containing protein, expressed -
7 Sobic.007G043900 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
8 Sobic.002G076000 transporter-related, putative, expressed -
9 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
10 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
12 Sobic.006G183800 KH domain containing protein, putative, expressed K13095: splicing factor 1
13 Sobic.006G145000 disease resistance RPP13-like protein 1, putative, expressed -
14 Sobic.004G096500 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
15 Sobic.007G079200 exonuclease, putative, expressed -
16 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
17 Sobic.009G100050 - -
18 Sobic.010G050700 protein kinase, putative, expressed -
19 Sobic.003G353600 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
20 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G010800 Sobic002G010800 Sobic005G084100 Sobic005G084100 Sobic002G010800--Sobic005G084100 Sobic002G423200 Sobic002G423200 Sobic002G010800--Sobic002G423200 Sobic002G049000 Sobic002G049000 Sobic002G010800--Sobic002G049000 Sobic001G303675 Sobic001G303675 Sobic002G010800--Sobic001G303675 Sobic001G094000 Sobic001G094000 Sobic002G010800--Sobic001G094000 Sobic006G052300 Sobic006G052300 Sobic002G010800--Sobic006G052300 Sobic007G043900 Sobic007G043900 Sobic002G010800--Sobic007G043900 Sobic002G076000 Sobic002G076000 Sobic002G010800--Sobic002G076000 Sobic006G056000 Sobic006G056000 Sobic002G010800--Sobic006G056000 Sobic008G083000 Sobic008G083000 Sobic005G084100--Sobic008G083000 Sobic002G259800 Sobic002G259800 Sobic005G084100--Sobic002G259800 Sobic001G360900 Sobic001G360900 Sobic005G084100--Sobic001G360900 Sobic010G279700 Sobic010G279700 Sobic005G084100--Sobic010G279700 Sobic005G084100--Sobic002G076000 Sobic005G084100--Sobic001G094000 Sobic002G090800 Sobic002G090800 Sobic005G084100--Sobic002G090800 Sobic008G131000 Sobic008G131000 Sobic005G084100--Sobic008G131000 Sobic005G084100--Sobic006G056000 Sobic002G423200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic002G423200--Sobic005G133500 Sobic004G246100 Sobic004G246100 Sobic002G423200--Sobic004G246100 Sobic006G248500 Sobic006G248500 Sobic002G423200--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G423200--Sobic008G127400 Sobic010G236400 Sobic010G236400 Sobic002G423200--Sobic010G236400 Sobic003G353600 Sobic003G353600 Sobic002G423200--Sobic003G353600 Sobic001G138400 Sobic001G138400 Sobic002G423200--Sobic001G138400 Sobic006G138000 Sobic006G138000 Sobic002G423200--Sobic006G138000 Sobic003G346000 Sobic003G346000 Sobic002G049000--Sobic003G346000 Sobic002G297800 Sobic002G297800 Sobic002G049000--Sobic002G297800 Sobic002G090400 Sobic002G090400 Sobic002G049000--Sobic002G090400 Sobic008G068800 Sobic008G068800 Sobic002G049000--Sobic008G068800 Sobic007G011400 Sobic007G011400 Sobic002G049000--Sobic007G011400 Sobic002G061400 Sobic002G061400 Sobic002G049000--Sobic002G061400 Sobic002G049000--Sobic001G094000 Sobic008G034600 Sobic008G034600 Sobic002G049000--Sobic008G034600 Sobic001G394400 Sobic001G394400 Sobic002G049000--Sobic001G394400 Sobic001G306900 Sobic001G306900 Sobic001G303675--Sobic001G306900 Sobic001G303675--Sobic001G094000 Sobic002G144933 Sobic002G144933 Sobic001G303675--Sobic002G144933 Sobic009G100050 Sobic009G100050 Sobic001G303675--Sobic009G100050 Sobic005G015900 Sobic005G015900 Sobic001G303675--Sobic005G015900 Sobic002G320500 Sobic002G320500 Sobic001G303675--Sobic002G320500 Sobic004G096500 Sobic004G096500 Sobic001G303675--Sobic004G096500 Sobic002G151600 Sobic002G151600 Sobic001G303675--Sobic002G151600 Sobic003G170100 Sobic003G170100 Sobic001G303675--Sobic003G170100 Sobic001G094000--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G094000--Sobic009G040700 Sobic001G477800 Sobic001G477800 Sobic001G094000--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic001G094000--Sobic002G157000 Sobic003G268300 Sobic003G268300 Sobic001G094000--Sobic003G268300 Sobic002G157300 Sobic002G157300 Sobic001G094000--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic001G094000--Sobic003G187400 Sobic004G031700 Sobic004G031700 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300 Sobic004G264300 Sobic004G264300 Sobic006G052300--Sobic004G264300 Sobic004G009600 Sobic004G009600 Sobic006G052300--Sobic004G009600 Sobic006G220000 Sobic006G220000 Sobic006G052300--Sobic006G220000 Sobic007G054400 Sobic007G054400 Sobic006G052300--Sobic007G054400 Sobic006G052300--Sobic004G096500 Sobic006G210000 Sobic006G210000 Sobic006G052300--Sobic006G210000 Sobic004G145500 Sobic004G145500 Sobic006G052300--Sobic004G145500 Sobic008G100100 Sobic008G100100 Sobic006G052300--Sobic008G100100 Sobic010G277500 Sobic010G277500 Sobic006G052300--Sobic010G277500 Sobic004G232000 Sobic004G232000 Sobic007G043900--Sobic004G232000 Sobic007G043900--Sobic004G096500 Sobic007G043900--Sobic006G056000 Sobic007G043900--Sobic006G052300 Sobic007G043900--Sobic009G100050 Sobic007G043900--Sobic002G010800 Sobic009G096100 Sobic009G096100 Sobic007G043900--Sobic009G096100 Sobic001G087100 Sobic001G087100 Sobic007G043900--Sobic001G087100 Sobic004G087600 Sobic004G087600 Sobic007G043900--Sobic004G087600 Sobic002G076000--Sobic006G056000 Sobic002G076000--Sobic005G084100 Sobic002G076000--Sobic003G353600 Sobic003G070100 Sobic003G070100 Sobic002G076000--Sobic003G070100 Sobic002G076000--Sobic009G100050 Sobic002G076000--Sobic004G232000 Sobic004G325400 Sobic004G325400 Sobic002G076000--Sobic004G325400 Sobic009G213100 Sobic009G213100 Sobic002G076000--Sobic009G213100 Sobic010G083000 Sobic010G083000 Sobic002G076000--Sobic010G083000 Sobic006G056000--Sobic003G353600 Sobic006G056000--Sobic002G076000 Sobic006G056000--Sobic005G084100 Sobic004G111000 Sobic004G111000 Sobic006G056000--Sobic004G111000 Sobic002G079100 Sobic002G079100 Sobic006G056000--Sobic002G079100 Sobic006G056000--Sobic001G138400 Sobic004G285000 Sobic004G285000 Sobic006G056000--Sobic004G285000 Sobic006G047100 Sobic006G047100 Sobic006G056000--Sobic006G047100 Sobic006G056000--Sobic006G210000
Octagon: transcription factors


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