Gene annotation
Transcriptome id Sobic.001G217100.1
Synonym Sb01g019110, DRB2
Functional annotation double-stranded RNA binding motif containing protein, expressed
UniProt A0A1B6QK73
Pfam PF00035
Panther DB PTHR10910 PTHR10910:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28380 : dsRNA-binding protein 2
RAP-DB (Rice) LOC_Os10g33970.1 : double-stranded RNA binding motif containing protein, expressed
MaizeGDB (Corn) Zm00025a017607 , Zm00025a006575
Brachypodium KQJ97133 , PNT67562
Barley HORVU1Hr1G041820.2 , HORVU1Hr1G041820.3 , HORVU1Hr1G041820.1 , HORVU1Hr1G041820.6 , HORVU1Hr1G041820.4 , HORVU1Hr1G041820.5 , HORVU5Hr1G076910.8 , HORVU5Hr1G076910.1 , HORVU5Hr1G076910.3 , HORVU5Hr1G076910.4 , HORVU5Hr1G076910.5 , HORVU5Hr1G076910.6 , HORVU5Hr1G076910.7
Wheat TraesCS5B02G289100 , TraesCS1B02G174000 , TraesCS1D02G155300 , TraesCS5A02G290100 , TraesCS5A02G290100 , TraesCS1A02G157700 , TraesCS1A02G157700 , TraesCS1A02G157700 , TraesCS5D02G297600 , TraesCS5D02G297600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G217100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G229100 OsFBX61 - F-box domain containing protein, expressed -
2 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -
3 Sobic.006G067700 "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)"(PubMedID : 28676627)@AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
5 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
6 Sobic.009G164900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
7 Sobic.001G019200 H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
8 Sobic.002G430900 PWWP domain containing protein, expressed -
9 Sobic.002G002100 expressed protein -
10 Sobic.003G077500 expressed protein -
11 Sobic.002G139000 OsFBX237 - F-box domain containing protein, expressed -
12 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
13 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
14 Sobic.006G167300 AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
15 Sobic.002G219900 Spc97 / Spc98 family protein, putative, expressed K16570: TUBGCP3, gamma-tubulin complex component 3
16 Sobic.010G050700 protein kinase, putative, expressed -
17 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
18 Sobic.009G141700 expressed protein -
19 Sobic.001G315400 expressed protein -
20 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G217100 Sobic001G217100 Sobic004G229100 Sobic004G229100 Sobic001G217100--Sobic004G229100 Sobic003G132700 Sobic003G132700 Sobic001G217100--Sobic003G132700 Sobic006G067700 Sobic006G067700 Sobic001G217100--Sobic006G067700 Sobic002G223300 Sobic002G223300 Sobic001G217100--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic001G217100--Sobic002G334600 Sobic009G164900 Sobic009G164900 Sobic001G217100--Sobic009G164900 Sobic001G019200 Sobic001G019200 Sobic001G217100--Sobic001G019200 Sobic002G430900 Sobic002G430900 Sobic001G217100--Sobic002G430900 Sobic002G002100 Sobic002G002100 Sobic001G217100--Sobic002G002100 Sobic004G229100--Sobic001G217100 Sobic004G078100 Sobic004G078100 Sobic004G229100--Sobic004G078100 Sobic009G192500 Sobic009G192500 Sobic004G229100--Sobic009G192500 Sobic004G229100--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic004G229100--Sobic007G046900 Sobic004G229100--Sobic009G164900 Sobic002G089900 Sobic002G089900 Sobic004G229100--Sobic002G089900 Sobic009G018000 Sobic009G018000 Sobic004G229100--Sobic009G018000 Sobic002G095700 Sobic002G095700 Sobic004G229100--Sobic002G095700 Sobic003G132700--Sobic009G192500 Sobic003G354100 Sobic003G354100 Sobic003G132700--Sobic003G354100 Sobic007G117100 Sobic007G117100 Sobic003G132700--Sobic007G117100 Sobic003G132700--Sobic002G089900 Sobic002G014700 Sobic002G014700 Sobic003G132700--Sobic002G014700 Sobic003G132700--Sobic002G223300 Sobic003G132700--Sobic002G334600 Sobic003G433500 Sobic003G433500 Sobic003G132700--Sobic003G433500 Sobic001G507400 Sobic001G507400 Sobic003G132700--Sobic001G507400 Sobic003G104100 Sobic003G104100 Sobic006G067700--Sobic003G104100 Sobic009G148200 Sobic009G148200 Sobic006G067700--Sobic009G148200 Sobic001G395200 Sobic001G395200 Sobic006G067700--Sobic001G395200 Sobic010G065800 Sobic010G065800 Sobic006G067700--Sobic010G065800 Sobic006G067700--Sobic001G217100 Sobic003G323300 Sobic003G323300 Sobic006G067700--Sobic003G323300 Sobic002G098500 Sobic002G098500 Sobic006G067700--Sobic002G098500 Sobic006G262100 Sobic006G262100 Sobic006G067700--Sobic006G262100 Sobic008G136100 Sobic008G136100 Sobic006G067700--Sobic008G136100 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic002G223300--Sobic003G132700 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic002G334600--Sobic002G223300 Sobic009G030300 Sobic009G030300 Sobic002G334600--Sobic009G030300 Sobic007G139400 Sobic007G139400 Sobic002G334600--Sobic007G139400 Sobic007G188900 Sobic007G188900 Sobic002G334600--Sobic007G188900 Sobic002G334600--Sobic003G132700 Sobic002G334600--Sobic002G089900 Sobic002G334600--Sobic003G354100 Sobic009G044900 Sobic009G044900 Sobic002G334600--Sobic009G044900 Sobic002G157200 Sobic002G157200 Sobic002G334600--Sobic002G157200 Sobic002G007200 Sobic002G007200 Sobic009G164900--Sobic002G007200 Sobic003G380500 Sobic003G380500 Sobic009G164900--Sobic003G380500 Sobic001G216600 Sobic001G216600 Sobic009G164900--Sobic001G216600 Sobic003G356200 Sobic003G356200 Sobic009G164900--Sobic003G356200 Sobic009G164900--Sobic001G217100 Sobic009G164900--Sobic004G229100 Sobic009G011500 Sobic009G011500 Sobic009G164900--Sobic009G011500 Sobic007G195400 Sobic007G195400 Sobic009G164900--Sobic007G195400 Sobic009G164900--Sobic002G157200 Sobic010G135300 Sobic010G135300 Sobic001G019200--Sobic010G135300 Sobic008G048966 Sobic008G048966 Sobic001G019200--Sobic008G048966 Sobic002G216600 Sobic002G216600 Sobic001G019200--Sobic002G216600 Sobic001G019200--Sobic001G217100 Sobic001G113800 Sobic001G113800 Sobic001G019200--Sobic001G113800 Sobic001G499200 Sobic001G499200 Sobic001G019200--Sobic001G499200 Sobic001G296100 Sobic001G296100 Sobic001G019200--Sobic001G296100 Sobic003G096300 Sobic003G096300 Sobic001G019200--Sobic003G096300 Sobic001G019200--Sobic002G098500 Sobic007G125700 Sobic007G125700 Sobic002G430900--Sobic007G125700 Sobic002G219900 Sobic002G219900 Sobic002G430900--Sobic002G219900 Sobic010G269300 Sobic010G269300 Sobic002G430900--Sobic010G269300 Sobic010G149600 Sobic010G149600 Sobic002G430900--Sobic010G149600 Sobic002G430900--Sobic009G192500 Sobic002G017900 Sobic002G017900 Sobic002G430900--Sobic002G017900 Sobic002G430900--Sobic001G395200 Sobic009G006900 Sobic009G006900 Sobic002G430900--Sobic009G006900 Sobic005G120700 Sobic005G120700 Sobic002G430900--Sobic005G120700 Sobic002G002100--Sobic001G113800 Sobic001G385400 Sobic001G385400 Sobic002G002100--Sobic001G385400 Sobic005G204100 Sobic005G204100 Sobic002G002100--Sobic005G204100 Sobic001G315400 Sobic001G315400 Sobic002G002100--Sobic001G315400 Sobic007G210900 Sobic007G210900 Sobic002G002100--Sobic007G210900 Sobic002G002100--Sobic002G098500 Sobic002G002100--Sobic002G216600 Sobic006G167300 Sobic006G167300 Sobic002G002100--Sobic006G167300 Sobic001G367100 Sobic001G367100 Sobic002G002100--Sobic001G367100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.