Gene annotation
Transcriptome id Sobic.003G132700.1
Synonym
Functional annotation OsFBX237 - F-box domain containing protein, expressed
UniProt A0A1B6Q2Y6
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF142
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G22430 : F-box family protein
RAP-DB (Rice) LOC_Os07g35050.1 : OsFBX237 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G132700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
2 Sobic.003G354100 expressed protein -
3 Sobic.007G117100 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
4 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
5 Sobic.002G014700 OsFBX209 - F-box domain containing protein, expressed -
6 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
7 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
8 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
9 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
10 Sobic.004G229100 OsFBX61 - F-box domain containing protein, expressed -
11 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
12 Sobic.006G248500 expressed protein -
13 Sobic.003G420700 expressed protein -
14 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
15 Sobic.004G347100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
16 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
17 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
18 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.002G430900 PWWP domain containing protein, expressed -
20 Sobic.009G151200 expressed protein -


Gene co-expression network
sample Sobic003G132700 Sobic003G132700 Sobic009G192500 Sobic009G192500 Sobic003G132700--Sobic009G192500 Sobic003G354100 Sobic003G354100 Sobic003G132700--Sobic003G354100 Sobic007G117100 Sobic007G117100 Sobic003G132700--Sobic007G117100 Sobic002G089900 Sobic002G089900 Sobic003G132700--Sobic002G089900 Sobic002G014700 Sobic002G014700 Sobic003G132700--Sobic002G014700 Sobic002G223300 Sobic002G223300 Sobic003G132700--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic003G132700--Sobic002G334600 Sobic003G433500 Sobic003G433500 Sobic003G132700--Sobic003G433500 Sobic001G507400 Sobic001G507400 Sobic003G132700--Sobic001G507400 Sobic009G192500--Sobic003G132700 Sobic009G192500--Sobic007G117100 Sobic002G430900 Sobic002G430900 Sobic009G192500--Sobic002G430900 Sobic009G022100 Sobic009G022100 Sobic009G192500--Sobic009G022100 Sobic007G125700 Sobic007G125700 Sobic009G192500--Sobic007G125700 Sobic002G095700 Sobic002G095700 Sobic009G192500--Sobic002G095700 Sobic003G253400 Sobic003G253400 Sobic009G192500--Sobic003G253400 Sobic009G192500--Sobic002G223300 Sobic004G229100 Sobic004G229100 Sobic009G192500--Sobic004G229100 Sobic003G354100--Sobic003G433500 Sobic004G013600 Sobic004G013600 Sobic003G354100--Sobic004G013600 Sobic003G354100--Sobic003G132700 Sobic003G354100--Sobic007G117100 Sobic007G188900 Sobic007G188900 Sobic003G354100--Sobic007G188900 Sobic007G139400 Sobic007G139400 Sobic003G354100--Sobic007G139400 Sobic006G092800 Sobic006G092800 Sobic003G354100--Sobic006G092800 Sobic006G248500 Sobic006G248500 Sobic003G354100--Sobic006G248500 Sobic009G129600 Sobic009G129600 Sobic003G354100--Sobic009G129600 Sobic001G038100 Sobic001G038100 Sobic007G117100--Sobic001G038100 Sobic007G117100--Sobic003G433500 Sobic007G117100--Sobic003G132700 Sobic006G120800 Sobic006G120800 Sobic007G117100--Sobic006G120800 Sobic007G117100--Sobic001G507400 Sobic001G309100 Sobic001G309100 Sobic007G117100--Sobic001G309100 Sobic007G117100--Sobic003G354100 Sobic007G117100--Sobic002G014700 Sobic007G117100--Sobic002G089900 Sobic004G078100 Sobic004G078100 Sobic002G089900--Sobic004G078100 Sobic009G044900 Sobic009G044900 Sobic002G089900--Sobic009G044900 Sobic002G089900--Sobic003G433500 Sobic002G089900--Sobic006G248500 Sobic002G089900--Sobic003G132700 Sobic002G089900--Sobic002G095700 Sobic002G089900--Sobic007G117100 Sobic002G089900--Sobic004G013600 Sobic002G259800 Sobic002G259800 Sobic002G089900--Sobic002G259800 Sobic002G014700--Sobic003G132700 Sobic002G014700--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic002G014700--Sobic003G420700 Sobic002G014700--Sobic001G507400 Sobic002G014700--Sobic001G038100 Sobic002G014700--Sobic009G192500 Sobic009G034400 Sobic009G034400 Sobic002G014700--Sobic009G034400 Sobic003G140900 Sobic003G140900 Sobic002G014700--Sobic003G140900 Sobic002G014700--Sobic001G309100 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic002G334600--Sobic002G223300 Sobic009G030300 Sobic009G030300 Sobic002G334600--Sobic009G030300 Sobic002G334600--Sobic007G139400 Sobic002G334600--Sobic007G188900 Sobic002G334600--Sobic003G132700 Sobic002G334600--Sobic002G089900 Sobic002G334600--Sobic003G354100 Sobic002G334600--Sobic009G044900 Sobic002G157200 Sobic002G157200 Sobic002G334600--Sobic002G157200 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic009G216000 Sobic009G216000 Sobic003G433500--Sobic009G216000 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic003G433500--Sobic006G248500 Sobic002G362300 Sobic002G362300 Sobic003G433500--Sobic002G362300 Sobic003G433500--Sobic002G259800 Sobic001G507400--Sobic001G038100 Sobic001G507400--Sobic007G117100 Sobic007G191700 Sobic007G191700 Sobic001G507400--Sobic007G191700 Sobic001G507400--Sobic006G120800 Sobic009G258400 Sobic009G258400 Sobic001G507400--Sobic009G258400 Sobic001G507400--Sobic002G014700 Sobic001G507400--Sobic003G420700 Sobic002G204000 Sobic002G204000 Sobic001G507400--Sobic002G204000 Sobic010G154000 Sobic010G154000 Sobic001G507400--Sobic010G154000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.