Gene annotation
Transcriptome id Sobic.001G019200.1
Synonym Sb01g001870
Functional annotation H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed
UniProt A0A1Z5S4I4
Pfam -
Panther DB PTHR31060 PTHR31060:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G13690 : PRLI-interacting factor, putative
RAP-DB (Rice) LOC_Os04g20920.1 : H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed
MaizeGDB (Corn) Zm00025a016360
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G019200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G135300 expressed protein -
2 Sobic.008G048966 - -
3 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
4 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
5 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
6 Sobic.001G499200 PLAC8 family protein, expressed -
7 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
9 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
10 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
11 Sobic.007G210900 expressed protein -
12 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
13 Sobic.003G077500 expressed protein -
14 Sobic.002G002100 expressed protein -
15 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
16 Sobic.004G199700 expressed protein -
17 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.006G067700 "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)"(PubMedID : 28676627)@AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.001G157100 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
20 Sobic.001G079900 expressed protein -


Gene co-expression network
sample Sobic001G019200 Sobic001G019200 Sobic010G135300 Sobic010G135300 Sobic001G019200--Sobic010G135300 Sobic008G048966 Sobic008G048966 Sobic001G019200--Sobic008G048966 Sobic002G216600 Sobic002G216600 Sobic001G019200--Sobic002G216600 Sobic001G217100 Sobic001G217100 Sobic001G019200--Sobic001G217100 Sobic001G113800 Sobic001G113800 Sobic001G019200--Sobic001G113800 Sobic001G499200 Sobic001G499200 Sobic001G019200--Sobic001G499200 Sobic001G296100 Sobic001G296100 Sobic001G019200--Sobic001G296100 Sobic003G096300 Sobic003G096300 Sobic001G019200--Sobic003G096300 Sobic002G098500 Sobic002G098500 Sobic001G019200--Sobic002G098500 Sobic002G142500 Sobic002G142500 Sobic010G135300--Sobic002G142500 Sobic006G257200 Sobic006G257200 Sobic010G135300--Sobic006G257200 Sobic010G135300--Sobic002G098500 Sobic010G135300--Sobic001G113800 Sobic008G038200 Sobic008G038200 Sobic010G135300--Sobic008G038200 Sobic010G135300--Sobic001G019200 Sobic001G047200 Sobic001G047200 Sobic010G135300--Sobic001G047200 Sobic002G293700 Sobic002G293700 Sobic010G135300--Sobic002G293700 Sobic001G298800 Sobic001G298800 Sobic010G135300--Sobic001G298800 Sobic001G244900 Sobic001G244900 Sobic008G048966--Sobic001G244900 Sobic008G048966--Sobic001G019200 Sobic003G104100 Sobic003G104100 Sobic008G048966--Sobic003G104100 Sobic009G207400 Sobic009G207400 Sobic008G048966--Sobic009G207400 Sobic006G240900 Sobic006G240900 Sobic008G048966--Sobic006G240900 Sobic009G200000 Sobic009G200000 Sobic008G048966--Sobic009G200000 Sobic010G257000 Sobic010G257000 Sobic008G048966--Sobic010G257000 Sobic008G048966--Sobic001G296100 Sobic001G395200 Sobic001G395200 Sobic008G048966--Sobic001G395200 Sobic005G204100 Sobic005G204100 Sobic002G216600--Sobic005G204100 Sobic001G384700 Sobic001G384700 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic009G259500 Sobic009G259500 Sobic002G216600--Sobic009G259500 Sobic004G199700 Sobic004G199700 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic003G174900 Sobic003G174900 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic004G229100 Sobic004G229100 Sobic001G217100--Sobic004G229100 Sobic003G132700 Sobic003G132700 Sobic001G217100--Sobic003G132700 Sobic006G067700 Sobic006G067700 Sobic001G217100--Sobic006G067700 Sobic002G223300 Sobic002G223300 Sobic001G217100--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic001G217100--Sobic002G334600 Sobic009G164900 Sobic009G164900 Sobic001G217100--Sobic009G164900 Sobic001G217100--Sobic001G019200 Sobic002G430900 Sobic002G430900 Sobic001G217100--Sobic002G430900 Sobic002G002100 Sobic002G002100 Sobic001G217100--Sobic002G002100 Sobic001G487200 Sobic001G487200 Sobic001G113800--Sobic001G487200 Sobic003G360700 Sobic003G360700 Sobic001G113800--Sobic003G360700 Sobic001G231200 Sobic001G231200 Sobic001G113800--Sobic001G231200 Sobic003G230000 Sobic003G230000 Sobic001G113800--Sobic003G230000 Sobic001G113800--Sobic010G135300 Sobic002G370400 Sobic002G370400 Sobic001G113800--Sobic002G370400 Sobic001G113800--Sobic002G002100 Sobic001G074000 Sobic001G074000 Sobic001G113800--Sobic001G074000 Sobic006G272500 Sobic006G272500 Sobic001G113800--Sobic006G272500 Sobic001G499200--Sobic001G296100 Sobic001G372900 Sobic001G372900 Sobic001G499200--Sobic001G372900 Sobic006G081500 Sobic006G081500 Sobic001G499200--Sobic006G081500 Sobic004G315700 Sobic004G315700 Sobic001G499200--Sobic004G315700 Sobic001G499200--Sobic008G048966 Sobic001G499200--Sobic001G079900 Sobic009G124800 Sobic009G124800 Sobic001G499200--Sobic009G124800 Sobic001G499200--Sobic001G019200 Sobic001G157100 Sobic001G157100 Sobic001G499200--Sobic001G157100 Sobic001G296100--Sobic006G272500 Sobic001G296100--Sobic001G499200 Sobic001G296100--Sobic009G124800 Sobic006G142500 Sobic006G142500 Sobic001G296100--Sobic006G142500 Sobic003G283600 Sobic003G283600 Sobic001G296100--Sobic003G283600 Sobic001G290500 Sobic001G290500 Sobic001G296100--Sobic001G290500 Sobic001G296100--Sobic004G315700 Sobic001G296100--Sobic001G487200 Sobic001G296100--Sobic001G372900 Sobic003G096300--Sobic008G038200 Sobic003G096300--Sobic002G098500 Sobic001G482300 Sobic001G482300 Sobic003G096300--Sobic001G482300 Sobic003G096300--Sobic002G216600 Sobic007G065300 Sobic007G065300 Sobic003G096300--Sobic007G065300 Sobic003G096300--Sobic005G204100 Sobic003G096300--Sobic001G047200 Sobic003G096300--Sobic001G384700 Sobic001G434100 Sobic001G434100 Sobic003G096300--Sobic001G434100 Sobic002G098500--Sobic008G038200 Sobic002G098500--Sobic007G065300 Sobic002G098500--Sobic003G096300 Sobic002G098500--Sobic005G204100 Sobic002G098500--Sobic010G135300 Sobic010G020600 Sobic010G020600 Sobic002G098500--Sobic010G020600 Sobic002G098500--Sobic002G216600 Sobic001G221900 Sobic001G221900 Sobic002G098500--Sobic001G221900 Sobic007G032100 Sobic007G032100 Sobic002G098500--Sobic007G032100
Octagon: transcription factors


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