Gene annotation
Transcriptome id Sobic.007G210900.2,Sobic.007G210900.1
Synonym Sb07g027800
Functional annotation expressed protein
UniProt A0A1Z5RB52 , C5YIS9
Pfam -
Panther DB PTHR31029 PTHR31029:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12900 : -
RAP-DB (Rice) LOC_Os08g39740.1 : expressed protein
MaizeGDB (Corn) Zm00025a005092 , Zm00025a047452 , Zm00025a033801
Brachypodium PNT68385 , PNT68384 , PNT68383 , KQJ90748 , KQJ98915 , PNT64832
Barley HORVU7Hr1G050500.5 , HORVU7Hr1G050500.4 , HORVU7Hr1G050500.7 , HORVU7Hr1G050500.6 , HORVU7Hr1G050500.1 , HORVU7Hr1G050500.3 , HORVU7Hr1G050500.2 , HORVU7Hr1G050500.8
Wheat TraesCS7B02G145600 , TraesCS7D02G244400 , TraesCS7A02G245900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
2 Sobic.004G154600 expressed protein -
3 Sobic.004G199700 expressed protein -
4 Sobic.002G002100 expressed protein -
5 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
6 Sobic.004G205500 expressed protein -
7 Sobic.006G167300 AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.008G190500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
9 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
11 Sobic.009G175200 expressed protein -
12 Sobic.009G248900 expressed protein -
13 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
14 Sobic.008G086200 expressed protein -
15 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
16 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
17 Sobic.001G157100 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
18 Sobic.002G315000 - -
19 Sobic.005G204100 kelch repeat protein, putative, expressed -
20 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -


Gene co-expression network
sample Sobic007G210900 Sobic007G210900 Sobic003G420800 Sobic003G420800 Sobic007G210900--Sobic003G420800 Sobic004G154600 Sobic004G154600 Sobic007G210900--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic007G210900--Sobic004G199700 Sobic002G002100 Sobic002G002100 Sobic007G210900--Sobic002G002100 Sobic002G348700 Sobic002G348700 Sobic007G210900--Sobic002G348700 Sobic004G205500 Sobic004G205500 Sobic007G210900--Sobic004G205500 Sobic006G167300 Sobic006G167300 Sobic007G210900--Sobic006G167300 Sobic008G190500 Sobic008G190500 Sobic007G210900--Sobic008G190500 Sobic002G179700 Sobic002G179700 Sobic007G210900--Sobic002G179700 Sobic003G420800--Sobic007G210900 Sobic002G315000 Sobic002G315000 Sobic003G420800--Sobic002G315000 Sobic005G204100 Sobic005G204100 Sobic003G420800--Sobic005G204100 Sobic009G154100 Sobic009G154100 Sobic003G420800--Sobic009G154100 Sobic003G420800--Sobic002G179700 Sobic003G333000 Sobic003G333000 Sobic003G420800--Sobic003G333000 Sobic003G174900 Sobic003G174900 Sobic003G420800--Sobic003G174900 Sobic001G482300 Sobic001G482300 Sobic003G420800--Sobic001G482300 Sobic001G047200 Sobic001G047200 Sobic003G420800--Sobic001G047200 Sobic009G259500 Sobic009G259500 Sobic004G154600--Sobic009G259500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic004G154600--Sobic007G210900 Sobic004G154600--Sobic004G199700 Sobic002G072700 Sobic002G072700 Sobic004G154600--Sobic002G072700 Sobic004G154600--Sobic003G174900 Sobic002G367300 Sobic002G367300 Sobic004G154600--Sobic002G367300 Sobic006G262600 Sobic006G262600 Sobic004G154600--Sobic006G262600 Sobic004G199700--Sobic009G259500 Sobic002G216600 Sobic002G216600 Sobic004G199700--Sobic002G216600 Sobic004G199700--Sobic003G174900 Sobic001G361800 Sobic001G361800 Sobic004G199700--Sobic001G361800 Sobic004G199700--Sobic002G348700 Sobic004G199700--Sobic002G072700 Sobic004G199700--Sobic005G204100 Sobic004G199700--Sobic007G210900 Sobic004G199700--Sobic004G154600 Sobic001G113800 Sobic001G113800 Sobic002G002100--Sobic001G113800 Sobic001G385400 Sobic001G385400 Sobic002G002100--Sobic001G385400 Sobic002G002100--Sobic005G204100 Sobic001G315400 Sobic001G315400 Sobic002G002100--Sobic001G315400 Sobic002G002100--Sobic007G210900 Sobic002G098500 Sobic002G098500 Sobic002G002100--Sobic002G098500 Sobic002G002100--Sobic002G216600 Sobic002G002100--Sobic006G167300 Sobic001G367100 Sobic001G367100 Sobic002G002100--Sobic001G367100 Sobic002G348700--Sobic002G216600 Sobic002G348700--Sobic004G199700 Sobic002G348700--Sobic003G174900 Sobic002G348700--Sobic007G210900 Sobic002G348700--Sobic004G205500 Sobic002G348700--Sobic003G420800 Sobic002G348700--Sobic009G259500 Sobic002G348700--Sobic006G167300 Sobic009G164900 Sobic009G164900 Sobic002G348700--Sobic009G164900 Sobic004G205500--Sobic004G154600 Sobic004G205500--Sobic004G199700 Sobic004G205500--Sobic003G174900 Sobic003G420201 Sobic003G420201 Sobic004G205500--Sobic003G420201 Sobic004G205500--Sobic007G210900 Sobic004G205500--Sobic002G367300 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic008G086200 Sobic008G086200 Sobic004G205500--Sobic008G086200 Sobic006G167300--Sobic002G002100 Sobic004G255800 Sobic004G255800 Sobic006G167300--Sobic004G255800 Sobic006G167300--Sobic007G210900 Sobic006G167300--Sobic004G199700 Sobic001G157100 Sobic001G157100 Sobic006G167300--Sobic001G157100 Sobic006G167300--Sobic008G086200 Sobic006G167300--Sobic002G348700 Sobic006G167300--Sobic001G047200 Sobic001G217100 Sobic001G217100 Sobic006G167300--Sobic001G217100 Sobic008G190500--Sobic007G210900 Sobic008G190500--Sobic008G086200 Sobic010G135300 Sobic010G135300 Sobic008G190500--Sobic010G135300 Sobic003G077500 Sobic003G077500 Sobic008G190500--Sobic003G077500 Sobic001G021500 Sobic001G021500 Sobic008G190500--Sobic001G021500 Sobic003G023400 Sobic003G023400 Sobic008G190500--Sobic003G023400 Sobic009G123500 Sobic009G123500 Sobic008G190500--Sobic009G123500 Sobic008G190500--Sobic003G420800 Sobic008G190500--Sobic001G315400 Sobic002G179700--Sobic009G154100 Sobic005G227050 Sobic005G227050 Sobic002G179700--Sobic005G227050 Sobic005G209900 Sobic005G209900 Sobic002G179700--Sobic005G209900 Sobic001G356400 Sobic001G356400 Sobic002G179700--Sobic001G356400 Sobic005G196500 Sobic005G196500 Sobic002G179700--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic002G179700--Sobic006G233600 Sobic010G107200 Sobic010G107200 Sobic002G179700--Sobic010G107200 Sobic002G179700--Sobic002G315000 Sobic002G179700--Sobic002G072700
Octagon: transcription factors


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