Gene annotation
Transcriptome id Sobic.003G174900.1
Synonym Sb03g021860
Functional annotation fimbrin-like protein 2, putative, expressed
UniProt C5XM26
Pfam PF00307
Panther DB PTHR19961 PTHR19961:SF25
NCBI CDD -
KEGG Orthology K17336; plastin-3
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G48460 : Actin binding Calponin homology (CH) domain-containing protein
RAP-DB (Rice) LOC_Os01g33080.1 : fimbrin-like protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a024763
Brachypodium KQK04496
Barley HORVU3Hr1G042140.6 , HORVU3Hr1G042140.4 , HORVU3Hr1G042140.5 , HORVU3Hr1G042140.2 , HORVU3Hr1G042140.3 , HORVU3Hr1G042140.1 , HORVU3Hr1G042140.8 , HORVU3Hr1G042140.9 , HORVU3Hr1G042140.14 , HORVU3Hr1G042140.15 , HORVU3Hr1G042140.16 , HORVU3Hr1G042140.10 , HORVU3Hr1G042140.11 , HORVU3Hr1G042140.12 , HORVU3Hr1G042140.13
Wheat TraesCS3A02G196300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G199700 expressed protein -
2 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
3 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
4 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
5 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
6 Sobic.005G204100 kelch repeat protein, putative, expressed -
7 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
8 Sobic.008G086200 expressed protein -
9 Sobic.004G205500 expressed protein -
10 Sobic.009G175200 expressed protein -
11 Sobic.004G154600 expressed protein -
12 Sobic.007G210900 expressed protein -
13 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
14 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
15 Sobic.010G010900 expressed protein -
16 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
17 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
18 Sobic.004G259101 - -
19 Sobic.003G375000 RNA recognition motif containing protein, putative, expressed -
20 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic003G174900 Sobic003G174900 Sobic004G199700 Sobic004G199700 Sobic003G174900--Sobic004G199700 Sobic002G216600 Sobic002G216600 Sobic003G174900--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic003G174900--Sobic009G259500 Sobic001G361800 Sobic001G361800 Sobic003G174900--Sobic001G361800 Sobic001G258100 Sobic001G258100 Sobic003G174900--Sobic001G258100 Sobic005G204100 Sobic005G204100 Sobic003G174900--Sobic005G204100 Sobic002G348700 Sobic002G348700 Sobic003G174900--Sobic002G348700 Sobic008G086200 Sobic008G086200 Sobic003G174900--Sobic008G086200 Sobic004G205500 Sobic004G205500 Sobic003G174900--Sobic004G205500 Sobic004G199700--Sobic009G259500 Sobic004G199700--Sobic002G216600 Sobic004G199700--Sobic003G174900 Sobic004G199700--Sobic001G361800 Sobic004G199700--Sobic002G348700 Sobic002G072700 Sobic002G072700 Sobic004G199700--Sobic002G072700 Sobic004G199700--Sobic005G204100 Sobic007G210900 Sobic007G210900 Sobic004G199700--Sobic007G210900 Sobic004G154600 Sobic004G154600 Sobic004G199700--Sobic004G154600 Sobic002G216600--Sobic005G204100 Sobic001G384700 Sobic001G384700 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic002G216600--Sobic009G259500 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic002G216600--Sobic003G174900 Sobic002G216600--Sobic002G348700 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic001G361800--Sobic004G199700 Sobic008G148500 Sobic008G148500 Sobic001G361800--Sobic008G148500 Sobic001G361800--Sobic003G174900 Sobic006G272500 Sobic006G272500 Sobic001G361800--Sobic006G272500 Sobic001G361800--Sobic002G072700 Sobic001G361800--Sobic009G259500 Sobic009G175200 Sobic009G175200 Sobic001G361800--Sobic009G175200 Sobic005G054700 Sobic005G054700 Sobic001G361800--Sobic005G054700 Sobic009G124800 Sobic009G124800 Sobic001G361800--Sobic009G124800 Sobic004G259101 Sobic004G259101 Sobic001G258100--Sobic004G259101 Sobic001G258100--Sobic009G259500 Sobic001G258100--Sobic003G174900 Sobic001G258100--Sobic002G072700 Sobic010G010900 Sobic010G010900 Sobic001G258100--Sobic010G010900 Sobic004G168600 Sobic004G168600 Sobic001G258100--Sobic004G168600 Sobic001G258100--Sobic007G142900 Sobic001G267800 Sobic001G267800 Sobic001G258100--Sobic001G267800 Sobic001G514400 Sobic001G514400 Sobic001G258100--Sobic001G514400 Sobic005G204100--Sobic002G216600 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic001G221900 Sobic001G221900 Sobic005G204100--Sobic001G221900 Sobic005G204100--Sobic001G384700 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400 Sobic002G348700--Sobic002G216600 Sobic002G348700--Sobic004G199700 Sobic002G348700--Sobic003G174900 Sobic002G348700--Sobic007G210900 Sobic002G348700--Sobic004G205500 Sobic003G420800 Sobic003G420800 Sobic002G348700--Sobic003G420800 Sobic002G348700--Sobic009G259500 Sobic006G167300 Sobic006G167300 Sobic002G348700--Sobic006G167300 Sobic009G164900 Sobic009G164900 Sobic002G348700--Sobic009G164900 Sobic004G225700 Sobic004G225700 Sobic008G086200--Sobic004G225700 Sobic008G086200--Sobic009G175200 Sobic008G086200--Sobic003G174900 Sobic003G375000 Sobic003G375000 Sobic008G086200--Sobic003G375000 Sobic009G123500 Sobic009G123500 Sobic008G086200--Sobic009G123500 Sobic008G190500 Sobic008G190500 Sobic008G086200--Sobic008G190500 Sobic004G289500 Sobic004G289500 Sobic008G086200--Sobic004G289500 Sobic008G086200--Sobic009G164900 Sobic010G118700 Sobic010G118700 Sobic008G086200--Sobic010G118700 Sobic004G205500--Sobic004G154600 Sobic004G205500--Sobic004G199700 Sobic004G205500--Sobic003G174900 Sobic003G420201 Sobic003G420201 Sobic004G205500--Sobic003G420201 Sobic004G205500--Sobic007G210900 Sobic002G367300 Sobic002G367300 Sobic004G205500--Sobic002G367300 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic004G205500--Sobic008G086200
Octagon: transcription factors


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