Gene annotation
Transcriptome id Sobic.002G348700.1
Synonym Sb02g037130
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
carboxyl-terminal peptidase, putative, expressed
UniProt C5XCC0
Pfam PF14365 PF03080
Panther DB PTHR31589 PTHR31589:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13510 : Protein of Unknown Function (DUF239)
RAP-DB (Rice) LOC_Os07g38590.1 : carboxyl-terminal peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a025627 , Zm00025a008658 , Zm00025a045353 , Zm00025a048469
Brachypodium KQK15596 , KQK12586
Barley HORVU2Hr1G037700.1 , HORVU2Hr1G037700.11 , HORVU2Hr1G037700.10 , HORVU2Hr1G037700.12 , HORVU2Hr1G037700.9 , HORVU2Hr1G037700.8 , HORVU2Hr1G037700.3 , HORVU2Hr1G037700.2 , HORVU2Hr1G037700.5 , HORVU2Hr1G037700.4 , HORVU2Hr1G037700.7 , HORVU2Hr1G037700.6
Wheat TraesCS4A02G327000 , TraesCS2D02G203000 , TraesCS2D02G203000 , TraesCS2A02G184700 , TraesCS2B02G222700
Populus -


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cDNA sequences
Sobic.002G348700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
2 Sobic.004G199700 expressed protein -
3 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
4 Sobic.007G210900 expressed protein -
5 Sobic.004G205500 expressed protein -
6 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
7 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
8 Sobic.006G167300 AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
9 Sobic.009G164900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
10 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
11 Sobic.001G157100 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
12 Sobic.005G204100 kelch repeat protein, putative, expressed -
13 Sobic.004G154600 expressed protein -
14 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
15 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
16 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
17 Sobic.002G315000 - -
18 Sobic.004G259101 - -
19 Sobic.001G482300 3-ketoacyl-CoA synthase 10, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic002G348700 Sobic002G348700 Sobic002G216600 Sobic002G216600 Sobic002G348700--Sobic002G216600 Sobic004G199700 Sobic004G199700 Sobic002G348700--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G348700--Sobic003G174900 Sobic007G210900 Sobic007G210900 Sobic002G348700--Sobic007G210900 Sobic004G205500 Sobic004G205500 Sobic002G348700--Sobic004G205500 Sobic003G420800 Sobic003G420800 Sobic002G348700--Sobic003G420800 Sobic009G259500 Sobic009G259500 Sobic002G348700--Sobic009G259500 Sobic006G167300 Sobic006G167300 Sobic002G348700--Sobic006G167300 Sobic009G164900 Sobic009G164900 Sobic002G348700--Sobic009G164900 Sobic005G204100 Sobic005G204100 Sobic002G216600--Sobic005G204100 Sobic001G384700 Sobic001G384700 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic002G216600--Sobic009G259500 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic002G216600--Sobic003G174900 Sobic002G216600--Sobic002G348700 Sobic004G199700--Sobic009G259500 Sobic004G199700--Sobic002G216600 Sobic004G199700--Sobic003G174900 Sobic001G361800 Sobic001G361800 Sobic004G199700--Sobic001G361800 Sobic004G199700--Sobic002G348700 Sobic002G072700 Sobic002G072700 Sobic004G199700--Sobic002G072700 Sobic004G199700--Sobic005G204100 Sobic004G199700--Sobic007G210900 Sobic004G154600 Sobic004G154600 Sobic004G199700--Sobic004G154600 Sobic003G174900--Sobic004G199700 Sobic003G174900--Sobic002G216600 Sobic003G174900--Sobic009G259500 Sobic003G174900--Sobic001G361800 Sobic001G258100 Sobic001G258100 Sobic003G174900--Sobic001G258100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic008G086200 Sobic008G086200 Sobic003G174900--Sobic008G086200 Sobic003G174900--Sobic004G205500 Sobic007G210900--Sobic003G420800 Sobic007G210900--Sobic004G154600 Sobic007G210900--Sobic004G199700 Sobic002G002100 Sobic002G002100 Sobic007G210900--Sobic002G002100 Sobic007G210900--Sobic002G348700 Sobic007G210900--Sobic004G205500 Sobic007G210900--Sobic006G167300 Sobic008G190500 Sobic008G190500 Sobic007G210900--Sobic008G190500 Sobic002G179700 Sobic002G179700 Sobic007G210900--Sobic002G179700 Sobic004G205500--Sobic004G154600 Sobic004G205500--Sobic004G199700 Sobic004G205500--Sobic003G174900 Sobic003G420201 Sobic003G420201 Sobic004G205500--Sobic003G420201 Sobic004G205500--Sobic007G210900 Sobic002G367300 Sobic002G367300 Sobic004G205500--Sobic002G367300 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic004G205500--Sobic008G086200 Sobic003G420800--Sobic007G210900 Sobic002G315000 Sobic002G315000 Sobic003G420800--Sobic002G315000 Sobic003G420800--Sobic005G204100 Sobic009G154100 Sobic009G154100 Sobic003G420800--Sobic009G154100 Sobic003G420800--Sobic002G179700 Sobic003G333000 Sobic003G333000 Sobic003G420800--Sobic003G333000 Sobic003G420800--Sobic003G174900 Sobic001G482300 Sobic001G482300 Sobic003G420800--Sobic001G482300 Sobic001G047200 Sobic001G047200 Sobic003G420800--Sobic001G047200 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic006G167300--Sobic002G002100 Sobic004G255800 Sobic004G255800 Sobic006G167300--Sobic004G255800 Sobic006G167300--Sobic007G210900 Sobic006G167300--Sobic004G199700 Sobic001G157100 Sobic001G157100 Sobic006G167300--Sobic001G157100 Sobic006G167300--Sobic008G086200 Sobic006G167300--Sobic002G348700 Sobic006G167300--Sobic001G047200 Sobic001G217100 Sobic001G217100 Sobic006G167300--Sobic001G217100 Sobic002G007200 Sobic002G007200 Sobic009G164900--Sobic002G007200 Sobic003G380500 Sobic003G380500 Sobic009G164900--Sobic003G380500 Sobic001G216600 Sobic001G216600 Sobic009G164900--Sobic001G216600 Sobic003G356200 Sobic003G356200 Sobic009G164900--Sobic003G356200 Sobic009G164900--Sobic001G217100 Sobic004G229100 Sobic004G229100 Sobic009G164900--Sobic004G229100 Sobic009G011500 Sobic009G011500 Sobic009G164900--Sobic009G011500 Sobic007G195400 Sobic007G195400 Sobic009G164900--Sobic007G195400 Sobic002G157200 Sobic002G157200 Sobic009G164900--Sobic002G157200
Octagon: transcription factors


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