Gene annotation
Transcriptome id Sobic.005G204100.3,Sobic.005G204100.2,Sobic.005G204100.1
Synonym Sb05g025915
Functional annotation kelch repeat protein, putative, expressed
UniProt C5Y7E0
Pfam PF13418
Panther DB PTHR23244 PTHR23244:SF327
NCBI CDD KOG0379; Kelch repeat-containing proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18590 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os11g43590.4 : kelch repeat protein, putative, expressed
MaizeGDB (Corn) Zm00025a029207
Brachypodium KQJ87463 , KQJ87462
Barley HORVU5Hr1G025430.28 , HORVU5Hr1G025430.29 , HORVU5Hr1G025430.22 , HORVU5Hr1G025430.23 , HORVU5Hr1G025430.20 , HORVU5Hr1G025430.26 , HORVU5Hr1G025430.27 , HORVU5Hr1G025430.24 , HORVU5Hr1G025430.25 , HORVU5Hr1G025430.19 , HORVU4Hr1G032550.43 , HORVU4Hr1G032550.40 , HORVU5Hr1G025430.13 , HORVU5Hr1G025430.11 , HORVU5Hr1G025430.10 , HORVU5Hr1G025430.17 , HORVU5Hr1G025430.16 , HORVU5Hr1G025430.14 , HORVU4Hr1G032550.46 , HORVU4Hr1G032550.44 , HORVU5Hr1G025430.18 , HORVU4Hr1G032550.41 , HORVU4Hr1G032550.33 , HORVU4Hr1G032550.32 , HORVU4Hr1G032550.31 , HORVU4Hr1G032550.37 , HORVU4Hr1G032550.36 , HORVU4Hr1G032550.35 , HORVU4Hr1G032550.34 , HORVU4Hr1G032550.20 , HORVU4Hr1G032550.21 , HORVU4Hr1G032550.27 , HORVU4Hr1G032550.5 , HORVU4Hr1G032550.4 , HORVU4Hr1G032550.7 , HORVU4Hr1G032550.6 , HORVU5Hr1G025430.2 , HORVU5Hr1G025430.1 , HORVU5Hr1G025430.7 , HORVU5Hr1G025430.5 , HORVU5Hr1G025430.4 , HORVU5Hr1G025430.8 , HORVU5Hr1G025430.31 , HORVU5Hr1G025430.30 , HORVU4Hr1G032550.18 , HORVU4Hr1G032550.17 , HORVU4Hr1G032550.16 , HORVU4Hr1G032550.11 , HORVU4Hr1G032550.13 , HORVU4Hr1G032550.12 , HORVU4Hr1G032550.53 , HORVU4Hr1G032550.52 , HORVU4Hr1G032550.55 , HORVU4Hr1G032550.56
Wheat TraesCS4A02G167800 , TraesCS5D02G106700 , TraesCS5A02G094400 , TraesCS5B02G100500 , TraesCS4D02G147200 , TraesCSU02G068300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
2 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
4 Sobic.007G142900 receptor-like kinase, putative, expressed -
5 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
6 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
8 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
9 Sobic.007G189400 BEE 1, putative, expressed -
10 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
11 Sobic.004G199700 expressed protein -
12 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
13 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
14 Sobic.003G300200 expressed protein -
15 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
16 Sobic.002G002100 expressed protein -
17 Sobic.002G071850 - -
18 Sobic.010G010900 expressed protein -
19 Sobic.006G185800 OsSub45 - Putative Subtilisin homologue, expressed -
20 Sobic.005G029700 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1


Gene co-expression network
sample Sobic005G204100 Sobic005G204100 Sobic002G216600 Sobic002G216600 Sobic005G204100--Sobic002G216600 Sobic009G259500 Sobic009G259500 Sobic005G204100--Sobic009G259500 Sobic002G072700 Sobic002G072700 Sobic005G204100--Sobic002G072700 Sobic007G142900 Sobic007G142900 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic001G221900 Sobic001G221900 Sobic005G204100--Sobic001G221900 Sobic001G384700 Sobic001G384700 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400 Sobic002G216600--Sobic005G204100 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic002G216600--Sobic009G259500 Sobic004G199700 Sobic004G199700 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic003G174900 Sobic003G174900 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic004G154600 Sobic004G154600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic009G259500--Sobic004G199700 Sobic009G259500--Sobic007G142900 Sobic001G258100 Sobic001G258100 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic002G072700--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic002G072700--Sobic001G228100 Sobic005G029700 Sobic005G029700 Sobic002G072700--Sobic005G029700 Sobic002G072700--Sobic005G204100 Sobic002G139800 Sobic002G139800 Sobic002G072700--Sobic002G139800 Sobic002G072700--Sobic007G142900 Sobic002G072700--Sobic001G221900 Sobic002G072700--Sobic009G259500 Sobic006G247700 Sobic006G247700 Sobic002G072700--Sobic006G247700 Sobic007G142900--Sobic002G072700 Sobic007G142900--Sobic005G204100 Sobic007G142900--Sobic009G259500 Sobic007G142900--Sobic007G189400 Sobic007G142900--Sobic002G216600 Sobic004G168600 Sobic004G168600 Sobic007G142900--Sobic004G168600 Sobic008G136100 Sobic008G136100 Sobic007G142900--Sobic008G136100 Sobic010G180800 Sobic010G180800 Sobic007G142900--Sobic010G180800 Sobic006G201600 Sobic006G201600 Sobic007G142900--Sobic006G201600 Sobic008G038200 Sobic008G038200 Sobic002G098500--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic002G098500--Sobic007G065300 Sobic003G096300 Sobic003G096300 Sobic002G098500--Sobic003G096300 Sobic002G098500--Sobic005G204100 Sobic010G135300 Sobic010G135300 Sobic002G098500--Sobic010G135300 Sobic010G020600 Sobic010G020600 Sobic002G098500--Sobic010G020600 Sobic002G098500--Sobic002G216600 Sobic002G098500--Sobic001G221900 Sobic007G032100 Sobic007G032100 Sobic002G098500--Sobic007G032100 Sobic003G070600 Sobic003G070600 Sobic001G221900--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic001G221900--Sobic009G235700 Sobic001G221900--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic001G221900--Sobic010G078700 Sobic003G339600 Sobic003G339600 Sobic001G221900--Sobic003G339600 Sobic001G199400 Sobic001G199400 Sobic001G221900--Sobic001G199400 Sobic004G248100 Sobic004G248100 Sobic001G221900--Sobic004G248100 Sobic001G074000 Sobic001G074000 Sobic001G221900--Sobic001G074000 Sobic003G113500 Sobic003G113500 Sobic001G221900--Sobic003G113500 Sobic001G384700--Sobic002G216600 Sobic001G384700--Sobic001G079900 Sobic001G384700--Sobic009G141700 Sobic006G046600 Sobic006G046600 Sobic001G384700--Sobic006G046600 Sobic001G384700--Sobic005G204100 Sobic004G052800 Sobic004G052800 Sobic001G384700--Sobic004G052800 Sobic005G168400 Sobic005G168400 Sobic001G384700--Sobic005G168400 Sobic001G379900 Sobic001G379900 Sobic001G384700--Sobic001G379900 Sobic001G434100 Sobic001G434100 Sobic001G384700--Sobic001G434100 Sobic009G124800 Sobic009G124800 Sobic006G272500--Sobic009G124800 Sobic001G285200 Sobic001G285200 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic010G010900 Sobic010G010900 Sobic006G272500--Sobic010G010900 Sobic002G419200 Sobic002G419200 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic002G370400 Sobic002G370400 Sobic006G272500--Sobic002G370400 Sobic008G148500 Sobic008G148500 Sobic006G272500--Sobic008G148500 Sobic007G189400--Sobic002G072700 Sobic005G188500 Sobic005G188500 Sobic007G189400--Sobic005G188500 Sobic009G254500 Sobic009G254500 Sobic007G189400--Sobic009G254500 Sobic007G189400--Sobic003G339600 Sobic001G488400 Sobic001G488400 Sobic007G189400--Sobic001G488400 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic001G119200 Sobic001G119200 Sobic007G189400--Sobic001G119200 Sobic007G189400--Sobic002G139800
Octagon: transcription factors


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