Gene annotation
Transcriptome id Sobic.004G199700.1
Synonym Sb04g024620
Functional annotation expressed protein
UniProt C5XWG8
Pfam PF13414
Panther DB PTHR22904 PTHR22904:SF379
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10200 : ARM-repeat/Tetratricopeptide repeat (TPR)-like protein
RAP-DB (Rice) LOC_Os05g34820.1 : expressed protein
MaizeGDB (Corn) Zm00025a021337 , Zm00025a031817
Brachypodium KQJ90046 , KQJ90044 , KQJ90047 , KQJ90045 , KQJ84027 , KQJ84028 , PNT64473 , PNT64472 , PNT64475 , PNT64474 , PNT64476
Barley -
Wheat TraesCS5A02G189100 , TraesCS5B02G194600 , TraesCS5D02G201900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
3 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
4 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
5 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
6 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
7 Sobic.005G204100 kelch repeat protein, putative, expressed -
8 Sobic.007G210900 expressed protein -
9 Sobic.004G154600 expressed protein -
10 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.007G142900 receptor-like kinase, putative, expressed -
12 Sobic.004G205500 expressed protein -
13 Sobic.006G167300 AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
14 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
15 Sobic.001G494100 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
16 Sobic.008G086200 expressed protein -
17 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
18 Sobic.002G002100 expressed protein -
19 Sobic.004G144100 - -
20 Sobic.004G259101 - -


Gene co-expression network
sample Sobic004G199700 Sobic004G199700 Sobic009G259500 Sobic009G259500 Sobic004G199700--Sobic009G259500 Sobic002G216600 Sobic002G216600 Sobic004G199700--Sobic002G216600 Sobic003G174900 Sobic003G174900 Sobic004G199700--Sobic003G174900 Sobic001G361800 Sobic001G361800 Sobic004G199700--Sobic001G361800 Sobic002G348700 Sobic002G348700 Sobic004G199700--Sobic002G348700 Sobic002G072700 Sobic002G072700 Sobic004G199700--Sobic002G072700 Sobic005G204100 Sobic005G204100 Sobic004G199700--Sobic005G204100 Sobic007G210900 Sobic007G210900 Sobic004G199700--Sobic007G210900 Sobic004G154600 Sobic004G154600 Sobic004G199700--Sobic004G154600 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic001G258100 Sobic001G258100 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic002G216600--Sobic005G204100 Sobic001G384700 Sobic001G384700 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic002G216600--Sobic009G259500 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic002G216600--Sobic003G174900 Sobic002G216600--Sobic002G348700 Sobic003G174900--Sobic004G199700 Sobic003G174900--Sobic002G216600 Sobic003G174900--Sobic009G259500 Sobic003G174900--Sobic001G361800 Sobic003G174900--Sobic001G258100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic008G086200 Sobic008G086200 Sobic003G174900--Sobic008G086200 Sobic004G205500 Sobic004G205500 Sobic003G174900--Sobic004G205500 Sobic001G361800--Sobic004G199700 Sobic008G148500 Sobic008G148500 Sobic001G361800--Sobic008G148500 Sobic001G361800--Sobic003G174900 Sobic006G272500 Sobic006G272500 Sobic001G361800--Sobic006G272500 Sobic001G361800--Sobic002G072700 Sobic001G361800--Sobic009G259500 Sobic009G175200 Sobic009G175200 Sobic001G361800--Sobic009G175200 Sobic005G054700 Sobic005G054700 Sobic001G361800--Sobic005G054700 Sobic009G124800 Sobic009G124800 Sobic001G361800--Sobic009G124800 Sobic002G348700--Sobic002G216600 Sobic002G348700--Sobic004G199700 Sobic002G348700--Sobic003G174900 Sobic002G348700--Sobic007G210900 Sobic002G348700--Sobic004G205500 Sobic003G420800 Sobic003G420800 Sobic002G348700--Sobic003G420800 Sobic002G348700--Sobic009G259500 Sobic006G167300 Sobic006G167300 Sobic002G348700--Sobic006G167300 Sobic009G164900 Sobic009G164900 Sobic002G348700--Sobic009G164900 Sobic007G189400 Sobic007G189400 Sobic002G072700--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic002G072700--Sobic001G228100 Sobic005G029700 Sobic005G029700 Sobic002G072700--Sobic005G029700 Sobic002G072700--Sobic005G204100 Sobic002G139800 Sobic002G139800 Sobic002G072700--Sobic002G139800 Sobic002G072700--Sobic007G142900 Sobic001G221900 Sobic001G221900 Sobic002G072700--Sobic001G221900 Sobic002G072700--Sobic009G259500 Sobic006G247700 Sobic006G247700 Sobic002G072700--Sobic006G247700 Sobic005G204100--Sobic002G216600 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic005G204100--Sobic001G221900 Sobic005G204100--Sobic001G384700 Sobic005G204100--Sobic006G272500 Sobic005G204100--Sobic007G189400 Sobic007G210900--Sobic003G420800 Sobic007G210900--Sobic004G154600 Sobic007G210900--Sobic004G199700 Sobic002G002100 Sobic002G002100 Sobic007G210900--Sobic002G002100 Sobic007G210900--Sobic002G348700 Sobic007G210900--Sobic004G205500 Sobic007G210900--Sobic006G167300 Sobic008G190500 Sobic008G190500 Sobic007G210900--Sobic008G190500 Sobic002G179700 Sobic002G179700 Sobic007G210900--Sobic002G179700 Sobic004G154600--Sobic009G259500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic004G154600--Sobic007G210900 Sobic004G154600--Sobic004G199700 Sobic004G154600--Sobic002G072700 Sobic004G154600--Sobic003G174900 Sobic002G367300 Sobic002G367300 Sobic004G154600--Sobic002G367300 Sobic006G262600 Sobic006G262600 Sobic004G154600--Sobic006G262600
Octagon: transcription factors


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