Gene annotation
Transcriptome id Sobic.004G144100.1
Synonym
Functional annotation -
UniProt A0A194YPS3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
2 Sobic.009G200000 expressed protein -
3 Sobic.006G262100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
4 Sobic.001G395200 cyclin-related protein, putative, expressed -
5 Sobic.008G048966 - -
6 Sobic.006G201600 transcription factor FL, putative, expressed -
7 Sobic.008G001300 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
8 Sobic.007G142900 receptor-like kinase, putative, expressed -
9 Sobic.002G002100 expressed protein -
10 Sobic.001G079900 expressed protein -
11 Sobic.005G204100 kelch repeat protein, putative, expressed -
12 Sobic.009G148200 deoxynucleoside kinase family, putative, expressed -
13 Sobic.009G141700 expressed protein -
14 Sobic.004G057700 zinc-binding protein, putative, expressed -
15 Sobic.004G199700 expressed protein -
16 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
17 Sobic.004G115700 extra-large G-protein-related, putative, expressed -
18 Sobic.009G207400 ATP binding protein, putative, expressed -
19 Sobic.008G042200 DUF623 domain containing protein, expressed -
20 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic004G144100 Sobic004G144100 Sobic002G216600 Sobic002G216600 Sobic004G144100--Sobic002G216600 Sobic009G200000 Sobic009G200000 Sobic004G144100--Sobic009G200000 Sobic006G262100 Sobic006G262100 Sobic004G144100--Sobic006G262100 Sobic001G395200 Sobic001G395200 Sobic004G144100--Sobic001G395200 Sobic008G048966 Sobic008G048966 Sobic004G144100--Sobic008G048966 Sobic006G201600 Sobic006G201600 Sobic004G144100--Sobic006G201600 Sobic008G001300 Sobic008G001300 Sobic004G144100--Sobic008G001300 Sobic007G142900 Sobic007G142900 Sobic004G144100--Sobic007G142900 Sobic002G002100 Sobic002G002100 Sobic004G144100--Sobic002G002100 Sobic005G204100 Sobic005G204100 Sobic002G216600--Sobic005G204100 Sobic001G384700 Sobic001G384700 Sobic002G216600--Sobic001G384700 Sobic002G216600--Sobic004G144100 Sobic009G259500 Sobic009G259500 Sobic002G216600--Sobic009G259500 Sobic004G199700 Sobic004G199700 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic003G174900 Sobic003G174900 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic008G042200 Sobic008G042200 Sobic009G200000--Sobic008G042200 Sobic004G115700 Sobic004G115700 Sobic009G200000--Sobic004G115700 Sobic005G092700 Sobic005G092700 Sobic009G200000--Sobic005G092700 Sobic008G190000 Sobic008G190000 Sobic009G200000--Sobic008G190000 Sobic006G240900 Sobic006G240900 Sobic009G200000--Sobic006G240900 Sobic009G207400 Sobic009G207400 Sobic009G200000--Sobic009G207400 Sobic001G075700 Sobic001G075700 Sobic009G200000--Sobic001G075700 Sobic001G244900 Sobic001G244900 Sobic009G200000--Sobic001G244900 Sobic005G125300 Sobic005G125300 Sobic009G200000--Sobic005G125300 Sobic006G262100--Sobic004G144100 Sobic006G067700 Sobic006G067700 Sobic006G262100--Sobic006G067700 Sobic001G494100 Sobic001G494100 Sobic006G262100--Sobic001G494100 Sobic002G162000 Sobic002G162000 Sobic006G262100--Sobic002G162000 Sobic002G098500 Sobic002G098500 Sobic006G262100--Sobic002G098500 Sobic006G262100--Sobic002G216600 Sobic006G257200 Sobic006G257200 Sobic006G262100--Sobic006G257200 Sobic006G262100--Sobic001G395200 Sobic002G143200 Sobic002G143200 Sobic006G262100--Sobic002G143200 Sobic003G104100 Sobic003G104100 Sobic001G395200--Sobic003G104100 Sobic009G259900 Sobic009G259900 Sobic001G395200--Sobic009G259900 Sobic002G219900 Sobic002G219900 Sobic001G395200--Sobic002G219900 Sobic010G149600 Sobic010G149600 Sobic001G395200--Sobic010G149600 Sobic003G351900 Sobic003G351900 Sobic001G395200--Sobic003G351900 Sobic006G008300 Sobic006G008300 Sobic001G395200--Sobic006G008300 Sobic007G125700 Sobic007G125700 Sobic001G395200--Sobic007G125700 Sobic004G043750 Sobic004G043750 Sobic001G395200--Sobic004G043750 Sobic001G395200--Sobic001G079900 Sobic008G048966--Sobic001G244900 Sobic001G019200 Sobic001G019200 Sobic008G048966--Sobic001G019200 Sobic008G048966--Sobic003G104100 Sobic008G048966--Sobic009G207400 Sobic008G048966--Sobic006G240900 Sobic008G048966--Sobic009G200000 Sobic010G257000 Sobic010G257000 Sobic008G048966--Sobic010G257000 Sobic001G296100 Sobic001G296100 Sobic008G048966--Sobic001G296100 Sobic008G048966--Sobic001G395200 Sobic009G260200 Sobic009G260200 Sobic006G201600--Sobic009G260200 Sobic006G201600--Sobic007G142900 Sobic006G201600--Sobic004G144100 Sobic001G042600 Sobic001G042600 Sobic006G201600--Sobic001G042600 Sobic006G201600--Sobic009G200000 Sobic006G201600--Sobic009G259500 Sobic005G123900 Sobic005G123900 Sobic006G201600--Sobic005G123900 Sobic007G189400 Sobic007G189400 Sobic006G201600--Sobic007G189400 Sobic006G201600--Sobic005G204100 Sobic008G001300--Sobic002G216600 Sobic008G001300--Sobic005G204100 Sobic008G001300--Sobic004G144100 Sobic010G050700 Sobic010G050700 Sobic008G001300--Sobic010G050700 Sobic008G001300--Sobic009G259500 Sobic008G001300--Sobic007G142900 Sobic008G001300--Sobic002G002100 Sobic008G001300--Sobic009G141700 Sobic010G065800 Sobic010G065800 Sobic008G001300--Sobic010G065800 Sobic002G072700 Sobic002G072700 Sobic007G142900--Sobic002G072700 Sobic007G142900--Sobic005G204100 Sobic007G142900--Sobic009G259500 Sobic007G142900--Sobic007G189400 Sobic007G142900--Sobic002G216600 Sobic004G168600 Sobic004G168600 Sobic007G142900--Sobic004G168600 Sobic008G136100 Sobic008G136100 Sobic007G142900--Sobic008G136100 Sobic010G180800 Sobic010G180800 Sobic007G142900--Sobic010G180800 Sobic007G142900--Sobic006G201600 Sobic001G113800 Sobic001G113800 Sobic002G002100--Sobic001G113800 Sobic001G385400 Sobic001G385400 Sobic002G002100--Sobic001G385400 Sobic002G002100--Sobic005G204100 Sobic001G315400 Sobic001G315400 Sobic002G002100--Sobic001G315400 Sobic007G210900 Sobic007G210900 Sobic002G002100--Sobic007G210900 Sobic002G002100--Sobic002G098500 Sobic002G002100--Sobic002G216600 Sobic006G167300 Sobic006G167300 Sobic002G002100--Sobic006G167300 Sobic001G367100 Sobic001G367100 Sobic002G002100--Sobic001G367100
Octagon: transcription factors


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