Gene annotation
Transcriptome id Sobic.004G057700.1
Synonym Sb04g004830
Functional annotation zinc-binding protein, putative, expressed
UniProt C5XW54
Pfam PF04640
Panther DB PTHR31065 PTHR31065:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G31040 : PLATZ transcription factor family protein
RAP-DB (Rice) LOC_Os06g45540.1 : zinc-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a019100 , Zm00025a051755
Brachypodium KQJ93562 , KQK17028
Barley HORVU7Hr1G108680.1 , HORVU7Hr1G108680.2 , HORVU7Hr1G108680.3 , HORVU7Hr1G108680.4 , HORVU7Hr1G108680.5 , HORVU7Hr1G108680.6 , HORVU6Hr1G031700.10 , HORVU6Hr1G031700.9 , HORVU6Hr1G031700.8 , HORVU6Hr1G031700.7 , HORVU6Hr1G031700.6 , HORVU6Hr1G031700.5 , HORVU6Hr1G031700.4 , HORVU6Hr1G031700.3 , HORVU6Hr1G031700.2
Wheat TraesCS6A02G156600 , TraesCS6D02G146600 , TraesCS7A02G479100 , TraesCS7D02G466400 , TraesCS7B02G381500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G000600 expressed protein -
2 Sobic.006G240900 plant protein of unknown function DUF869 domain containing protein, expressed -
3 Sobic.008G042200 DUF623 domain containing protein, expressed -
4 Sobic.004G115700 extra-large G-protein-related, putative, expressed -
5 Sobic.009G200000 expressed protein -
6 Sobic.008G048966 - -
7 Sobic.003G350400 thaumatin, putative, expressed -
8 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
9 Sobic.008G052300 plant protein of unknown function DUF869 domain containing protein, expressed -
10 Sobic.004G144100 - -
11 Sobic.009G207400 ATP binding protein, putative, expressed -
12 Sobic.009G077300 protein kinase, putative, expressed -
13 Sobic.010G175000 expressed protein -
14 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
15 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
16 Sobic.005G092700 expressed protein -
17 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
18 Sobic.009G155900 hhH-GPD superfamily base excision DNA repair protein, expressed -
19 Sobic.005G153000 agenet domain containing protein, expressed -
20 Sobic.010G013500 growth-regulating factor, putative, expressed -


Gene co-expression network
sample Sobic004G057700 Sobic004G057700 Sobic009G000600 Sobic009G000600 Sobic004G057700--Sobic009G000600 Sobic006G240900 Sobic006G240900 Sobic004G057700--Sobic006G240900 Sobic008G042200 Sobic008G042200 Sobic004G057700--Sobic008G042200 Sobic004G115700 Sobic004G115700 Sobic004G057700--Sobic004G115700 Sobic009G200000 Sobic009G200000 Sobic004G057700--Sobic009G200000 Sobic008G048966 Sobic008G048966 Sobic004G057700--Sobic008G048966 Sobic003G350400 Sobic003G350400 Sobic004G057700--Sobic003G350400 Sobic001G290500 Sobic001G290500 Sobic004G057700--Sobic001G290500 Sobic008G052300 Sobic008G052300 Sobic004G057700--Sobic008G052300 Sobic009G000600--Sobic004G057700 Sobic009G000600--Sobic001G290500 Sobic001G183500 Sobic001G183500 Sobic009G000600--Sobic001G183500 Sobic009G077300 Sobic009G077300 Sobic009G000600--Sobic009G077300 Sobic010G013500 Sobic010G013500 Sobic009G000600--Sobic010G013500 Sobic005G153000 Sobic005G153000 Sobic009G000600--Sobic005G153000 Sobic009G000600--Sobic006G240900 Sobic001G079900 Sobic001G079900 Sobic009G000600--Sobic001G079900 Sobic009G000600--Sobic008G048966 Sobic006G240900--Sobic008G042200 Sobic006G240900--Sobic009G200000 Sobic006G240900--Sobic004G115700 Sobic006G240900--Sobic004G057700 Sobic005G092700 Sobic005G092700 Sobic006G240900--Sobic005G092700 Sobic005G125300 Sobic005G125300 Sobic006G240900--Sobic005G125300 Sobic006G110850 Sobic006G110850 Sobic006G240900--Sobic006G110850 Sobic006G240900--Sobic008G048966 Sobic001G244900 Sobic001G244900 Sobic006G240900--Sobic001G244900 Sobic008G042200--Sobic009G200000 Sobic008G042200--Sobic005G092700 Sobic008G042200--Sobic004G115700 Sobic008G190000 Sobic008G190000 Sobic008G042200--Sobic008G190000 Sobic003G366000 Sobic003G366000 Sobic008G042200--Sobic003G366000 Sobic008G042200--Sobic006G240900 Sobic008G042200--Sobic006G110850 Sobic008G042200--Sobic005G125300 Sobic009G207400 Sobic009G207400 Sobic008G042200--Sobic009G207400 Sobic004G115700--Sobic009G200000 Sobic004G115700--Sobic008G042200 Sobic004G115700--Sobic005G092700 Sobic004G115700--Sobic008G190000 Sobic004G115700--Sobic006G240900 Sobic010G106100 Sobic010G106100 Sobic004G115700--Sobic010G106100 Sobic004G115700--Sobic006G110850 Sobic004G115700--Sobic003G366000 Sobic009G124800 Sobic009G124800 Sobic004G115700--Sobic009G124800 Sobic009G200000--Sobic008G042200 Sobic009G200000--Sobic004G115700 Sobic009G200000--Sobic005G092700 Sobic009G200000--Sobic008G190000 Sobic009G200000--Sobic006G240900 Sobic009G200000--Sobic009G207400 Sobic001G075700 Sobic001G075700 Sobic009G200000--Sobic001G075700 Sobic009G200000--Sobic001G244900 Sobic009G200000--Sobic005G125300 Sobic008G048966--Sobic001G244900 Sobic001G019200 Sobic001G019200 Sobic008G048966--Sobic001G019200 Sobic003G104100 Sobic003G104100 Sobic008G048966--Sobic003G104100 Sobic008G048966--Sobic009G207400 Sobic008G048966--Sobic006G240900 Sobic008G048966--Sobic009G200000 Sobic010G257000 Sobic010G257000 Sobic008G048966--Sobic010G257000 Sobic001G296100 Sobic001G296100 Sobic008G048966--Sobic001G296100 Sobic001G395200 Sobic001G395200 Sobic008G048966--Sobic001G395200 Sobic002G256900 Sobic002G256900 Sobic003G350400--Sobic002G256900 Sobic006G016700 Sobic006G016700 Sobic003G350400--Sobic006G016700 Sobic007G097100 Sobic007G097100 Sobic003G350400--Sobic007G097100 Sobic004G311600 Sobic004G311600 Sobic003G350400--Sobic004G311600 Sobic006G041700 Sobic006G041700 Sobic003G350400--Sobic006G041700 Sobic004G330200 Sobic004G330200 Sobic003G350400--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic003G350400--Sobic002G175200 Sobic001G246600 Sobic001G246600 Sobic003G350400--Sobic001G246600 Sobic004G142400 Sobic004G142400 Sobic003G350400--Sobic004G142400 Sobic001G290500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic001G290500--Sobic006G094100 Sobic006G281900 Sobic006G281900 Sobic001G290500--Sobic006G281900 Sobic003G283600 Sobic003G283600 Sobic001G290500--Sobic003G283600 Sobic006G275500 Sobic006G275500 Sobic001G290500--Sobic006G275500 Sobic001G054700 Sobic001G054700 Sobic001G290500--Sobic001G054700 Sobic001G290500--Sobic001G296100 Sobic009G188900 Sobic009G188900 Sobic001G290500--Sobic009G188900 Sobic001G290500--Sobic009G000600 Sobic004G269100 Sobic004G269100 Sobic008G052300--Sobic004G269100 Sobic008G052300--Sobic003G104100 Sobic009G127800 Sobic009G127800 Sobic008G052300--Sobic009G127800 Sobic006G221300 Sobic006G221300 Sobic008G052300--Sobic006G221300 Sobic005G163400 Sobic005G163400 Sobic008G052300--Sobic005G163400 Sobic002G259200 Sobic002G259200 Sobic008G052300--Sobic002G259200 Sobic008G052300--Sobic006G016700 Sobic008G052300--Sobic005G153000 Sobic009G225500 Sobic009G225500 Sobic008G052300--Sobic009G225500
Octagon: transcription factors


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