Gene annotation
Transcriptome id Sobic.009G000600.1
Synonym ATM, Sb09g000260, ATATM
Functional annotation expressed protein
UniProt C5YXX3
Pfam -
Panther DB PTHR35491 PTHR35491:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48190 : ataxia-telangiectasia mutated
RAP-DB (Rice) LOC_Os12g44130.1 : expressed protein
MaizeGDB (Corn) Zm00025a038303
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G057700 zinc-binding protein, putative, expressed -
2 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
3 Sobic.001G183500 cysteine proteinase inhibitor precursor, putative, expressed -
4 Sobic.009G077300 protein kinase, putative, expressed -
5 Sobic.010G013500 growth-regulating factor, putative, expressed -
6 Sobic.005G153000 agenet domain containing protein, expressed -
7 Sobic.006G240900 plant protein of unknown function DUF869 domain containing protein, expressed -
8 Sobic.001G079900 expressed protein -
9 Sobic.008G048966 - -
10 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
11 Sobic.006G221300 expressed protein -
12 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
13 Sobic.008G052300 plant protein of unknown function DUF869 domain containing protein, expressed -
14 Sobic.009G207400 ATP binding protein, putative, expressed -
15 Sobic.001G038450 - -
16 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
17 Sobic.008G042200 DUF623 domain containing protein, expressed -
18 Sobic.003G104100 expressed protein -
19 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
20 Sobic.004G282601 - -


Gene co-expression network
sample Sobic009G000600 Sobic009G000600 Sobic004G057700 Sobic004G057700 Sobic009G000600--Sobic004G057700 Sobic001G290500 Sobic001G290500 Sobic009G000600--Sobic001G290500 Sobic001G183500 Sobic001G183500 Sobic009G000600--Sobic001G183500 Sobic009G077300 Sobic009G077300 Sobic009G000600--Sobic009G077300 Sobic010G013500 Sobic010G013500 Sobic009G000600--Sobic010G013500 Sobic005G153000 Sobic005G153000 Sobic009G000600--Sobic005G153000 Sobic006G240900 Sobic006G240900 Sobic009G000600--Sobic006G240900 Sobic001G079900 Sobic001G079900 Sobic009G000600--Sobic001G079900 Sobic008G048966 Sobic008G048966 Sobic009G000600--Sobic008G048966 Sobic004G057700--Sobic009G000600 Sobic004G057700--Sobic006G240900 Sobic008G042200 Sobic008G042200 Sobic004G057700--Sobic008G042200 Sobic004G115700 Sobic004G115700 Sobic004G057700--Sobic004G115700 Sobic009G200000 Sobic009G200000 Sobic004G057700--Sobic009G200000 Sobic004G057700--Sobic008G048966 Sobic003G350400 Sobic003G350400 Sobic004G057700--Sobic003G350400 Sobic004G057700--Sobic001G290500 Sobic008G052300 Sobic008G052300 Sobic004G057700--Sobic008G052300 Sobic001G290500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic001G290500--Sobic006G094100 Sobic006G281900 Sobic006G281900 Sobic001G290500--Sobic006G281900 Sobic003G283600 Sobic003G283600 Sobic001G290500--Sobic003G283600 Sobic006G275500 Sobic006G275500 Sobic001G290500--Sobic006G275500 Sobic001G054700 Sobic001G054700 Sobic001G290500--Sobic001G054700 Sobic001G296100 Sobic001G296100 Sobic001G290500--Sobic001G296100 Sobic009G188900 Sobic009G188900 Sobic001G290500--Sobic009G188900 Sobic001G290500--Sobic009G000600 Sobic001G183500--Sobic009G000600 Sobic002G050700 Sobic002G050700 Sobic001G183500--Sobic002G050700 Sobic001G183500--Sobic001G079900 Sobic006G171050 Sobic006G171050 Sobic001G183500--Sobic006G171050 Sobic004G326800 Sobic004G326800 Sobic001G183500--Sobic004G326800 Sobic001G183500--Sobic009G077300 Sobic007G199600 Sobic007G199600 Sobic001G183500--Sobic007G199600 Sobic001G038450 Sobic001G038450 Sobic001G183500--Sobic001G038450 Sobic010G026100 Sobic010G026100 Sobic001G183500--Sobic010G026100 Sobic009G077300--Sobic005G153000 Sobic006G221300 Sobic006G221300 Sobic009G077300--Sobic006G221300 Sobic009G077300--Sobic001G054700 Sobic005G163400 Sobic005G163400 Sobic009G077300--Sobic005G163400 Sobic002G168000 Sobic002G168000 Sobic009G077300--Sobic002G168000 Sobic009G077300--Sobic002G050700 Sobic004G282601 Sobic004G282601 Sobic009G077300--Sobic004G282601 Sobic009G143200 Sobic009G143200 Sobic009G077300--Sobic009G143200 Sobic007G187700 Sobic007G187700 Sobic009G077300--Sobic007G187700 Sobic010G013500--Sobic009G000600 Sobic004G199200 Sobic004G199200 Sobic010G013500--Sobic004G199200 Sobic006G022400 Sobic006G022400 Sobic010G013500--Sobic006G022400 Sobic002G223300 Sobic002G223300 Sobic010G013500--Sobic002G223300 Sobic002G284400 Sobic002G284400 Sobic010G013500--Sobic002G284400 Sobic010G013500--Sobic001G290500 Sobic001G372900 Sobic001G372900 Sobic010G013500--Sobic001G372900 Sobic010G013500--Sobic006G281900 Sobic005G120600 Sobic005G120600 Sobic010G013500--Sobic005G120600 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic006G240900--Sobic008G042200 Sobic006G240900--Sobic009G200000 Sobic006G240900--Sobic004G115700 Sobic006G240900--Sobic004G057700 Sobic005G092700 Sobic005G092700 Sobic006G240900--Sobic005G092700 Sobic005G125300 Sobic005G125300 Sobic006G240900--Sobic005G125300 Sobic006G110850 Sobic006G110850 Sobic006G240900--Sobic006G110850 Sobic006G240900--Sobic008G048966 Sobic001G244900 Sobic001G244900 Sobic006G240900--Sobic001G244900 Sobic005G032600 Sobic005G032600 Sobic001G079900--Sobic005G032600 Sobic001G384700 Sobic001G384700 Sobic001G079900--Sobic001G384700 Sobic005G062600 Sobic005G062600 Sobic001G079900--Sobic005G062600 Sobic001G079900--Sobic002G050700 Sobic003G351900 Sobic003G351900 Sobic001G079900--Sobic003G351900 Sobic001G493900 Sobic001G493900 Sobic001G079900--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic001G079900--Sobic008G151600 Sobic002G027600 Sobic002G027600 Sobic001G079900--Sobic002G027600 Sobic009G141700 Sobic009G141700 Sobic001G079900--Sobic009G141700 Sobic008G048966--Sobic001G244900 Sobic001G019200 Sobic001G019200 Sobic008G048966--Sobic001G019200 Sobic003G104100 Sobic003G104100 Sobic008G048966--Sobic003G104100 Sobic009G207400 Sobic009G207400 Sobic008G048966--Sobic009G207400 Sobic008G048966--Sobic006G240900 Sobic008G048966--Sobic009G200000 Sobic010G257000 Sobic010G257000 Sobic008G048966--Sobic010G257000 Sobic008G048966--Sobic001G296100 Sobic001G395200 Sobic001G395200 Sobic008G048966--Sobic001G395200
Octagon: transcription factors


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