Gene annotation
Transcriptome id Sobic.008G136100.1
Synonym Sb08g018760, DNA binding with One Finger, SbDof28
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt A0A1Z5R6M5 , H6VSX3 , C5YPZ2
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G55370 : OBF-binding protein 3
RAP-DB (Rice) LOC_Os12g38200.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a025405 , Zm00025a017356 , Zm00025a004247 , Zm00025a037944 , Zm00025a007115 , Zm00025a006998 , Zm00025a040930 , Zm00025a039572 , Zm00025a038256 , Zm00025a044220 , Zm00025a016425 , Zm00025a043793 , Zm00025a017812 , Zm00025a027510 , Zm00025a040004
Brachypodium KQK22335 , KQK07701 , PNT73891 , PNT73890 , KQK12433 , KQK11789 , KQK09823 , KQJ86253 , KQJ96615
Barley HORVU1Hr1G076800.1 , HORVU5Hr1G021290.5 , HORVU5Hr1G021290.3 , HORVU5Hr1G021290.2 , HORVU5Hr1G021290.1 , HORVU5Hr1G113190.2 , HORVU5Hr1G113190.1 , HORVU1Hr1G005390.4 , HORVU1Hr1G005390.1 , HORVU1Hr1G005390.2 , HORVU1Hr1G005390.3 , HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU6Hr1G065250.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU7Hr1G043250.2 , HORVU3Hr1G116260.2 , HORVU6Hr1G065250.10 , HORVU3Hr1G116260.1 , HORVU3Hr1G116220.1 , HORVU3Hr1G116220.2
Wheat TraesCS4B02G206800 , TraesCS5B02G492600 , TraesCS4A02G097800 , TraesCS1A02G035200 , TraesCS3B02G608900 , TraesCS4D02G207600 , TraesCS5A02G078100 , TraesCS5A02G078100 , TraesCS3A02G403500 , TraesCS5D02G493000 , TraesCS5D02G093800 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS3D02G537400 , TraesCS5D02G093800 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS3A02G532000 , TraesCS1D02G036700 , TraesCS1D02G036700 , TraesCS3B02G609000 , TraesCS3B02G608800 , TraesCS5A02G479400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G065800 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
2 Sobic.007G142900 receptor-like kinase, putative, expressed -
3 Sobic.006G067700 "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)"(PubMedID : 28676627)@AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.004G168600 heat shock protein-related, putative, expressed -
5 Sobic.006G262100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
6 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
7 Sobic.008G042200 DUF623 domain containing protein, expressed -
8 Sobic.006G110850 - -
9 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
10 Sobic.006G240900 plant protein of unknown function DUF869 domain containing protein, expressed -
11 Sobic.004G199700 expressed protein -
12 Sobic.006G167300 AGC_PVPK_like_kin82y.11 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.010G180800 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
14 Sobic.003G411800 receptor-like protein kinase 2 precursor, putative, expressed -
15 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
16 Sobic.004G255800 AGC_PVPK_like_kin82y.7 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
17 Sobic.003G277900 "D61(Ortholog in rice:Morinaka et al., 2006(PubMedID : 31659871)@systemin receptor SR160 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
18 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
19 Sobic.004G115700 extra-large G-protein-related, putative, expressed -
20 Sobic.008G001300 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -


Gene co-expression network
sample Sobic008G136100 Sobic008G136100 Sobic010G065800 Sobic010G065800 Sobic008G136100--Sobic010G065800 Sobic007G142900 Sobic007G142900 Sobic008G136100--Sobic007G142900 Sobic006G067700 Sobic006G067700 Sobic008G136100--Sobic006G067700 Sobic004G168600 Sobic004G168600 Sobic008G136100--Sobic004G168600 Sobic006G262100 Sobic006G262100 Sobic008G136100--Sobic006G262100 Sobic009G259500 Sobic009G259500 Sobic008G136100--Sobic009G259500 Sobic008G042200 Sobic008G042200 Sobic008G136100--Sobic008G042200 Sobic006G110850 Sobic006G110850 Sobic008G136100--Sobic006G110850 Sobic002G098500 Sobic002G098500 Sobic008G136100--Sobic002G098500 Sobic010G065800--Sobic008G136100 Sobic001G408300 Sobic001G408300 Sobic010G065800--Sobic001G408300 Sobic010G065800--Sobic006G067700 Sobic001G143600 Sobic001G143600 Sobic010G065800--Sobic001G143600 Sobic009G010300 Sobic009G010300 Sobic010G065800--Sobic009G010300 Sobic002G219900 Sobic002G219900 Sobic010G065800--Sobic002G219900 Sobic001G385400 Sobic001G385400 Sobic010G065800--Sobic001G385400 Sobic006G056000 Sobic006G056000 Sobic010G065800--Sobic006G056000 Sobic009G148200 Sobic009G148200 Sobic010G065800--Sobic009G148200 Sobic002G072700 Sobic002G072700 Sobic007G142900--Sobic002G072700 Sobic005G204100 Sobic005G204100 Sobic007G142900--Sobic005G204100 Sobic007G142900--Sobic009G259500 Sobic007G189400 Sobic007G189400 Sobic007G142900--Sobic007G189400 Sobic002G216600 Sobic002G216600 Sobic007G142900--Sobic002G216600 Sobic007G142900--Sobic004G168600 Sobic007G142900--Sobic008G136100 Sobic010G180800 Sobic010G180800 Sobic007G142900--Sobic010G180800 Sobic006G201600 Sobic006G201600 Sobic007G142900--Sobic006G201600 Sobic003G104100 Sobic003G104100 Sobic006G067700--Sobic003G104100 Sobic006G067700--Sobic009G148200 Sobic001G395200 Sobic001G395200 Sobic006G067700--Sobic001G395200 Sobic006G067700--Sobic010G065800 Sobic001G217100 Sobic001G217100 Sobic006G067700--Sobic001G217100 Sobic003G323300 Sobic003G323300 Sobic006G067700--Sobic003G323300 Sobic006G067700--Sobic002G098500 Sobic006G067700--Sobic006G262100 Sobic006G067700--Sobic008G136100 Sobic001G381100 Sobic001G381100 Sobic004G168600--Sobic001G381100 Sobic003G309400 Sobic003G309400 Sobic004G168600--Sobic003G309400 Sobic001G267100 Sobic001G267100 Sobic004G168600--Sobic001G267100 Sobic005G091000 Sobic005G091000 Sobic004G168600--Sobic005G091000 Sobic001G145200 Sobic001G145200 Sobic004G168600--Sobic001G145200 Sobic003G300400 Sobic003G300400 Sobic004G168600--Sobic003G300400 Sobic008G190000 Sobic008G190000 Sobic004G168600--Sobic008G190000 Sobic002G224200 Sobic002G224200 Sobic004G168600--Sobic002G224200 Sobic001G345200 Sobic001G345200 Sobic004G168600--Sobic001G345200 Sobic004G144100 Sobic004G144100 Sobic006G262100--Sobic004G144100 Sobic006G262100--Sobic006G067700 Sobic001G494100 Sobic001G494100 Sobic006G262100--Sobic001G494100 Sobic002G162000 Sobic002G162000 Sobic006G262100--Sobic002G162000 Sobic006G262100--Sobic002G098500 Sobic006G262100--Sobic002G216600 Sobic006G257200 Sobic006G257200 Sobic006G262100--Sobic006G257200 Sobic006G262100--Sobic001G395200 Sobic002G143200 Sobic002G143200 Sobic006G262100--Sobic002G143200 Sobic009G259500--Sobic005G204100 Sobic009G259500--Sobic002G216600 Sobic004G154600 Sobic004G154600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic004G199700 Sobic004G199700 Sobic009G259500--Sobic004G199700 Sobic009G259500--Sobic007G142900 Sobic001G258100 Sobic001G258100 Sobic009G259500--Sobic001G258100 Sobic003G174900 Sobic003G174900 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic009G200000 Sobic009G200000 Sobic008G042200--Sobic009G200000 Sobic005G092700 Sobic005G092700 Sobic008G042200--Sobic005G092700 Sobic004G115700 Sobic004G115700 Sobic008G042200--Sobic004G115700 Sobic008G042200--Sobic008G190000 Sobic003G366000 Sobic003G366000 Sobic008G042200--Sobic003G366000 Sobic006G240900 Sobic006G240900 Sobic008G042200--Sobic006G240900 Sobic008G042200--Sobic006G110850 Sobic005G125300 Sobic005G125300 Sobic008G042200--Sobic005G125300 Sobic009G207400 Sobic009G207400 Sobic008G042200--Sobic009G207400 Sobic006G110850--Sobic003G366000 Sobic006G110850--Sobic008G042200 Sobic006G110850--Sobic005G092700 Sobic001G390400 Sobic001G390400 Sobic006G110850--Sobic001G390400 Sobic004G302700 Sobic004G302700 Sobic006G110850--Sobic004G302700 Sobic006G110850--Sobic008G190000 Sobic009G060800 Sobic009G060800 Sobic006G110850--Sobic009G060800 Sobic006G110850--Sobic004G115700 Sobic002G206100 Sobic002G206100 Sobic006G110850--Sobic002G206100 Sobic008G038200 Sobic008G038200 Sobic002G098500--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic002G098500--Sobic007G065300 Sobic003G096300 Sobic003G096300 Sobic002G098500--Sobic003G096300 Sobic002G098500--Sobic005G204100 Sobic010G135300 Sobic010G135300 Sobic002G098500--Sobic010G135300 Sobic010G020600 Sobic010G020600 Sobic002G098500--Sobic010G020600 Sobic002G098500--Sobic002G216600 Sobic001G221900 Sobic001G221900 Sobic002G098500--Sobic001G221900 Sobic007G032100 Sobic007G032100 Sobic002G098500--Sobic007G032100
Octagon: transcription factors


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