Gene annotation
Transcriptome id Sobic.003G272300.2,Sobic.003G272300.3
Synonym KELP, Sb03g032430
Functional annotation RNA polymerase II transcriptional coactivator KELP, putative, expressed
UniProt A0A1B6Q5M2 , C5XHM1
Pfam PF08766 PF02229 PF02229
Panther DB PTHR13215 PTHR13215:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003713transcription coactivator activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT4G10920 : transcriptional coactivator p15 (PC4) family protein (KELP)
RAP-DB (Rice) LOC_Os01g50960.1 : RNA polymerase II transcriptional coactivator KELP, putative, expressed
MaizeGDB (Corn) Zm00025a038926 , Zm00025a027845
Brachypodium -
Barley HORVU3Hr1G066410.6 , HORVU3Hr1G066410.7 , HORVU3Hr1G066410.4 , HORVU3Hr1G066410.5 , HORVU3Hr1G066410.2
Wheat TraesCS3A02G256000 , TraesCS3B02G284700 , TraesCS3D02G253600
Populus -


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cDNA sequences
Sobic.003G272300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G079800 expressed protein -
2 Sobic.003G382100 PHD finger protein, putative, expressed -
3 Sobic.006G248900 nucleolar protein,Nop52 containing protein, expressed K14849: ribosomal RNA-processing protein 1
4 Sobic.002G380600 transcription elongation factor SPT4 homolog 1, putative, expressed K15171: SUPT4H1, transcription elongation factor SPT4
5 Sobic.007G153700 transcription regulator, putative, expressed -
6 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
8 Sobic.004G027000 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
9 Sobic.003G098900 - -
10 Sobic.002G017900 tetratricopeptide repeat containing protein, putative, expressed K11291: nuclear autoantigenic sperm protein
11 Sobic.004G129600 expressed protein -
12 Sobic.010G197800 expressed protein -
13 Sobic.001G349400 heat shock protein DnaJ, putative, expressed -
14 Sobic.001G119700 transcription regulator, putative, expressed -
15 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2
16 Sobic.009G031500 agenet domain containing protein, putative, expressed -
17 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
18 Sobic.001G239100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
19 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
20 Sobic.006G181700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23


Gene co-expression network
sample Sobic003G272300 Sobic003G272300 Sobic010G079800 Sobic010G079800 Sobic003G272300--Sobic010G079800 Sobic003G382100 Sobic003G382100 Sobic003G272300--Sobic003G382100 Sobic006G248900 Sobic006G248900 Sobic003G272300--Sobic006G248900 Sobic002G380600 Sobic002G380600 Sobic003G272300--Sobic002G380600 Sobic007G153700 Sobic007G153700 Sobic003G272300--Sobic007G153700 Sobic007G050300 Sobic007G050300 Sobic003G272300--Sobic007G050300 Sobic004G206300 Sobic004G206300 Sobic003G272300--Sobic004G206300 Sobic004G027000 Sobic004G027000 Sobic003G272300--Sobic004G027000 Sobic003G098900 Sobic003G098900 Sobic003G272300--Sobic003G098900 Sobic001G239100 Sobic001G239100 Sobic010G079800--Sobic001G239100 Sobic010G079800--Sobic007G050300 Sobic001G136500 Sobic001G136500 Sobic010G079800--Sobic001G136500 Sobic004G146200 Sobic004G146200 Sobic010G079800--Sobic004G146200 Sobic010G079800--Sobic007G153700 Sobic007G031100 Sobic007G031100 Sobic010G079800--Sobic007G031100 Sobic001G478700 Sobic001G478700 Sobic010G079800--Sobic001G478700 Sobic010G079800--Sobic004G206300 Sobic001G188700 Sobic001G188700 Sobic010G079800--Sobic001G188700 Sobic009G006900 Sobic009G006900 Sobic003G382100--Sobic009G006900 Sobic003G274400 Sobic003G274400 Sobic003G382100--Sobic003G274400 Sobic006G272800 Sobic006G272800 Sobic003G382100--Sobic006G272800 Sobic001G468000 Sobic001G468000 Sobic003G382100--Sobic001G468000 Sobic002G196500 Sobic002G196500 Sobic003G382100--Sobic002G196500 Sobic005G032600 Sobic005G032600 Sobic003G382100--Sobic005G032600 Sobic009G087700 Sobic009G087700 Sobic003G382100--Sobic009G087700 Sobic002G374200 Sobic002G374200 Sobic003G382100--Sobic002G374200 Sobic005G062600 Sobic005G062600 Sobic003G382100--Sobic005G062600 Sobic006G248900--Sobic003G272300 Sobic006G255800 Sobic006G255800 Sobic006G248900--Sobic006G255800 Sobic003G054100 Sobic003G054100 Sobic006G248900--Sobic003G054100 Sobic003G122300 Sobic003G122300 Sobic006G248900--Sobic003G122300 Sobic001G157500 Sobic001G157500 Sobic006G248900--Sobic001G157500 Sobic009G050100 Sobic009G050100 Sobic006G248900--Sobic009G050100 Sobic008G088600 Sobic008G088600 Sobic006G248900--Sobic008G088600 Sobic006G248900--Sobic002G380600 Sobic001G013100 Sobic001G013100 Sobic006G248900--Sobic001G013100 Sobic006G056100 Sobic006G056100 Sobic002G380600--Sobic006G056100 Sobic002G380600--Sobic003G272300 Sobic006G160200 Sobic006G160200 Sobic002G380600--Sobic006G160200 Sobic004G190600 Sobic004G190600 Sobic002G380600--Sobic004G190600 Sobic002G289800 Sobic002G289800 Sobic002G380600--Sobic002G289800 Sobic001G440900 Sobic001G440900 Sobic002G380600--Sobic001G440900 Sobic001G300400 Sobic001G300400 Sobic002G380600--Sobic001G300400 Sobic006G183600 Sobic006G183600 Sobic002G380600--Sobic006G183600 Sobic001G172800 Sobic001G172800 Sobic002G380600--Sobic001G172800 Sobic007G153700--Sobic001G239100 Sobic007G153700--Sobic001G468000 Sobic007G153700--Sobic009G006900 Sobic007G153700--Sobic001G440900 Sobic007G153700--Sobic003G274400 Sobic010G237800 Sobic010G237800 Sobic007G153700--Sobic010G237800 Sobic004G129600 Sobic004G129600 Sobic007G153700--Sobic004G129600 Sobic007G153700--Sobic002G374200 Sobic007G153700--Sobic002G196500 Sobic006G051900 Sobic006G051900 Sobic007G050300--Sobic006G051900 Sobic006G120800 Sobic006G120800 Sobic007G050300--Sobic006G120800 Sobic010G197800 Sobic010G197800 Sobic007G050300--Sobic010G197800 Sobic002G095700 Sobic002G095700 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic007G050300--Sobic010G079800 Sobic001G038100 Sobic001G038100 Sobic007G050300--Sobic001G038100 Sobic003G253400 Sobic003G253400 Sobic007G050300--Sobic003G253400 Sobic007G117100 Sobic007G117100 Sobic007G050300--Sobic007G117100 Sobic004G212700 Sobic004G212700 Sobic004G206300--Sobic004G212700 Sobic004G206300--Sobic004G027000 Sobic009G056300 Sobic009G056300 Sobic004G206300--Sobic009G056300 Sobic004G206300--Sobic004G129600 Sobic009G031500 Sobic009G031500 Sobic004G206300--Sobic009G031500 Sobic008G125000 Sobic008G125000 Sobic004G206300--Sobic008G125000 Sobic004G225300 Sobic004G225300 Sobic004G206300--Sobic004G225300 Sobic001G335500 Sobic001G335500 Sobic004G206300--Sobic001G335500 Sobic001G099800 Sobic001G099800 Sobic004G206300--Sobic001G099800 Sobic004G027000--Sobic004G225300 Sobic004G027000--Sobic004G206300 Sobic002G139000 Sobic002G139000 Sobic004G027000--Sobic002G139000 Sobic004G027000--Sobic009G056300 Sobic002G394800 Sobic002G394800 Sobic004G027000--Sobic002G394800 Sobic001G422700 Sobic001G422700 Sobic004G027000--Sobic001G422700 Sobic001G280400 Sobic001G280400 Sobic004G027000--Sobic001G280400 Sobic005G164500 Sobic005G164500 Sobic004G027000--Sobic005G164500 Sobic004G184000 Sobic004G184000 Sobic004G027000--Sobic004G184000 Sobic004G305100 Sobic004G305100 Sobic003G098900--Sobic004G305100 Sobic010G041000 Sobic010G041000 Sobic003G098900--Sobic010G041000 Sobic004G111000 Sobic004G111000 Sobic003G098900--Sobic004G111000 Sobic003G098900--Sobic002G394800 Sobic004G285000 Sobic004G285000 Sobic003G098900--Sobic004G285000 Sobic010G215900 Sobic010G215900 Sobic003G098900--Sobic010G215900 Sobic003G361400 Sobic003G361400 Sobic003G098900--Sobic003G361400 Sobic003G436600 Sobic003G436600 Sobic003G098900--Sobic003G436600 Sobic002G177500 Sobic002G177500 Sobic003G098900--Sobic002G177500
Octagon: transcription factors


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