Gene annotation
Transcriptome id Sobic.001G119700.1
Synonym Sb01g010570
Functional annotation transcription regulator, putative, expressed
UniProt C5WNQ3
Pfam PF04504
Panther DB PTHR31662 PTHR31662:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11510 : DNA-binding storekeeper protein-related transcriptional regulator
RAP-DB (Rice) LOC_Os03g50110.1 : transcription regulator, putative, expressed
MaizeGDB (Corn) Zm00025a007810 , Zm00025a017011
Brachypodium KQK13595
Barley HORVU4Hr1G007130.3 , HORVU4Hr1G007130.2 , HORVU4Hr1G007130.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G119700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G148300 - -
2 Sobic.001G503400 expressed protein -
3 Sobic.003G247900 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
4 Sobic.008G111700 expressed protein -
5 Sobic.009G082600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
6 Sobic.001G448200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
7 Sobic.005G010500 expressed protein -
8 Sobic.002G272600 TBC domain containing protein, expressed -
9 Sobic.001G349400 heat shock protein DnaJ, putative, expressed -
10 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
11 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
12 Sobic.003G125100 uncharacterized Cys-rich domain containing protein, putative, expressed -
13 Sobic.006G207500 expressed protein -
14 Sobic.002G244700 cytosolic phospholipase A2 beta, putative, expressed K19219: peptidyl-lysine (3S)-dioxygenase / protease
15 Sobic.002G348000 STE_PAK_Ste20_Slob_Wnk.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
16 Sobic.003G038600 phosducin-like protein 3, putative, expressed -
17 Sobic.010G219100 protein kinase APK1B, chloroplast precursor, putative, expressed -
18 Sobic.003G227200 mitochondrial import receptor subunit TOM7-1, putative, expressed K17771: mitochondrial import receptor subunit TOM7
19 Sobic.003G410700 exostosin family domain containing protein, expressed -
20 Sobic.002G318600 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G119700 Sobic001G119700 Sobic002G148300 Sobic002G148300 Sobic001G119700--Sobic002G148300 Sobic001G503400 Sobic001G503400 Sobic001G119700--Sobic001G503400 Sobic003G247900 Sobic003G247900 Sobic001G119700--Sobic003G247900 Sobic008G111700 Sobic008G111700 Sobic001G119700--Sobic008G111700 Sobic009G082600 Sobic009G082600 Sobic001G119700--Sobic009G082600 Sobic001G448200 Sobic001G448200 Sobic001G119700--Sobic001G448200 Sobic005G010500 Sobic005G010500 Sobic001G119700--Sobic005G010500 Sobic002G272600 Sobic002G272600 Sobic001G119700--Sobic002G272600 Sobic001G349400 Sobic001G349400 Sobic001G119700--Sobic001G349400 Sobic002G148300--Sobic001G503400 Sobic002G148300--Sobic002G272600 Sobic002G143900 Sobic002G143900 Sobic002G148300--Sobic002G143900 Sobic002G148300--Sobic001G119700 Sobic007G162800 Sobic007G162800 Sobic002G148300--Sobic007G162800 Sobic010G219100 Sobic010G219100 Sobic002G148300--Sobic010G219100 Sobic009G193850 Sobic009G193850 Sobic002G148300--Sobic009G193850 Sobic002G148300--Sobic005G010500 Sobic002G180000 Sobic002G180000 Sobic002G148300--Sobic002G180000 Sobic001G503400--Sobic002G148300 Sobic006G065800 Sobic006G065800 Sobic001G503400--Sobic006G065800 Sobic003G361500 Sobic003G361500 Sobic001G503400--Sobic003G361500 Sobic001G503400--Sobic001G119700 Sobic004G319300 Sobic004G319300 Sobic001G503400--Sobic004G319300 Sobic001G503400--Sobic002G272600 Sobic003G119800 Sobic003G119800 Sobic001G503400--Sobic003G119800 Sobic002G009900 Sobic002G009900 Sobic001G503400--Sobic002G009900 Sobic007G006900 Sobic007G006900 Sobic001G503400--Sobic007G006900 Sobic003G038600 Sobic003G038600 Sobic003G247900--Sobic003G038600 Sobic003G247900--Sobic010G219100 Sobic001G507400 Sobic001G507400 Sobic003G247900--Sobic001G507400 Sobic003G247900--Sobic008G111700 Sobic001G285300 Sobic001G285300 Sobic003G247900--Sobic001G285300 Sobic001G532100 Sobic001G532100 Sobic003G247900--Sobic001G532100 Sobic003G247900--Sobic002G272600 Sobic006G094600 Sobic006G094600 Sobic003G247900--Sobic006G094600 Sobic002G077900 Sobic002G077900 Sobic003G247900--Sobic002G077900 Sobic008G111700--Sobic001G285300 Sobic008G111700--Sobic003G038600 Sobic008G111700--Sobic001G448200 Sobic008G111700--Sobic001G349400 Sobic008G111700--Sobic003G247900 Sobic003G031200 Sobic003G031200 Sobic008G111700--Sobic003G031200 Sobic003G043400 Sobic003G043400 Sobic008G111700--Sobic003G043400 Sobic008G111700--Sobic006G094600 Sobic006G261100 Sobic006G261100 Sobic008G111700--Sobic006G261100 Sobic002G039200 Sobic002G039200 Sobic009G082600--Sobic002G039200 Sobic010G033300 Sobic010G033300 Sobic009G082600--Sobic010G033300 Sobic009G082600--Sobic001G119700 Sobic001G382400 Sobic001G382400 Sobic009G082600--Sobic001G382400 Sobic003G319000 Sobic003G319000 Sobic009G082600--Sobic003G319000 Sobic009G082600--Sobic002G272600 Sobic004G305400 Sobic004G305400 Sobic009G082600--Sobic004G305400 Sobic004G053300 Sobic004G053300 Sobic009G082600--Sobic004G053300 Sobic003G092700 Sobic003G092700 Sobic009G082600--Sobic003G092700 Sobic001G448200--Sobic001G285300 Sobic001G448200--Sobic008G111700 Sobic003G118400 Sobic003G118400 Sobic001G448200--Sobic003G118400 Sobic001G448200--Sobic006G094600 Sobic001G448200--Sobic003G247900 Sobic001G448200--Sobic003G038600 Sobic004G031800 Sobic004G031800 Sobic001G448200--Sobic004G031800 Sobic001G448200--Sobic010G219100 Sobic009G201800 Sobic009G201800 Sobic001G448200--Sobic009G201800 Sobic003G052400 Sobic003G052400 Sobic005G010500--Sobic003G052400 Sobic006G207500 Sobic006G207500 Sobic005G010500--Sobic006G207500 Sobic005G010500--Sobic002G148300 Sobic010G045833 Sobic010G045833 Sobic005G010500--Sobic010G045833 Sobic002G348600 Sobic002G348600 Sobic005G010500--Sobic002G348600 Sobic010G099200 Sobic010G099200 Sobic005G010500--Sobic010G099200 Sobic001G408100 Sobic001G408100 Sobic005G010500--Sobic001G408100 Sobic001G105100 Sobic001G105100 Sobic005G010500--Sobic001G105100 Sobic005G010500--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic002G272600--Sobic001G061700 Sobic001G080000 Sobic001G080000 Sobic002G272600--Sobic001G080000 Sobic001G143500 Sobic001G143500 Sobic002G272600--Sobic001G143500 Sobic003G405700 Sobic003G405700 Sobic002G272600--Sobic003G405700 Sobic010G105600 Sobic010G105600 Sobic002G272600--Sobic010G105600 Sobic007G205000 Sobic007G205000 Sobic002G272600--Sobic007G205000 Sobic002G272600--Sobic003G038600 Sobic003G350600 Sobic003G350600 Sobic002G272600--Sobic003G350600 Sobic002G272600--Sobic010G219100 Sobic001G349400--Sobic008G111700 Sobic001G349400--Sobic001G285300 Sobic003G434000 Sobic003G434000 Sobic001G349400--Sobic003G434000 Sobic002G051200 Sobic002G051200 Sobic001G349400--Sobic002G051200 Sobic003G024800 Sobic003G024800 Sobic001G349400--Sobic003G024800 Sobic006G143500 Sobic006G143500 Sobic001G349400--Sobic006G143500 Sobic009G036900 Sobic009G036900 Sobic001G349400--Sobic009G036900 Sobic001G127400 Sobic001G127400 Sobic001G349400--Sobic001G127400 Sobic003G420700 Sobic003G420700 Sobic001G349400--Sobic003G420700
Octagon: transcription factors


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