Gene annotation
Transcriptome id Sobic.003G248300.1
Synonym Sb03g030470
Functional annotation kinase, pfkB family, putative, expressed
UniProt C5XFY6
Pfam PF08543
Panther DB PTHR10584 PTHR10584:SF166
NCBI CDD KOG2855; Ribokinase
KEGG Orthology K00852; rbsK, ribokinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17160 : pfkB-like carbohydrate kinase family protein
RAP-DB (Rice) LOC_Os01g47550.1 : kinase, pfkB family, putative, expressed
MaizeGDB (Corn) Zm00025a038744
Brachypodium KQK09076 , KQK09075
Barley HORVU3Hr1G060480.2 , HORVU3Hr1G060480.1
Wheat TraesCS3A02G242400 , TraesCS3D02G242400 , TraesCS3B02G270400
Populus -


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cDNA sequences
Sobic.003G248300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
2 Sobic.002G317600 endoribonuclease, putative, expressed -
3 Sobic.003G286200 expressed protein -
4 Sobic.005G110526 - -
5 Sobic.006G129900 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
6 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
7 Sobic.006G038200 receptor protein kinase, putative, expressed -
8 Sobic.007G043600 LSM domain containing protein, expressed K12621: U6 snRNA-associated Sm-like protein LSm2
9 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
10 Sobic.010G134100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
11 Sobic.009G016500 expressed protein -
12 Sobic.005G047000 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
13 Sobic.001G493400 nucleic acid binding protein, putative, expressed -
14 Sobic.010G018500 expressed protein -
15 Sobic.001G347901 - -
16 Sobic.001G167500 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
17 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
18 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
19 Sobic.004G242100 expressed protein -
20 Sobic.002G271300 NC domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G248300 Sobic003G248300 Sobic003G170300 Sobic003G170300 Sobic003G248300--Sobic003G170300 Sobic002G317600 Sobic002G317600 Sobic003G248300--Sobic002G317600 Sobic003G286200 Sobic003G286200 Sobic003G248300--Sobic003G286200 Sobic005G110526 Sobic005G110526 Sobic003G248300--Sobic005G110526 Sobic006G129900 Sobic006G129900 Sobic003G248300--Sobic006G129900 Sobic001G473400 Sobic001G473400 Sobic003G248300--Sobic001G473400 Sobic006G038200 Sobic006G038200 Sobic003G248300--Sobic006G038200 Sobic007G043600 Sobic007G043600 Sobic003G248300--Sobic007G043600 Sobic010G258000 Sobic010G258000 Sobic003G248300--Sobic010G258000 Sobic009G240700 Sobic009G240700 Sobic003G170300--Sobic009G240700 Sobic008G150300 Sobic008G150300 Sobic003G170300--Sobic008G150300 Sobic003G170300--Sobic001G473400 Sobic004G155100 Sobic004G155100 Sobic003G170300--Sobic004G155100 Sobic004G282700 Sobic004G282700 Sobic003G170300--Sobic004G282700 Sobic002G180300 Sobic002G180300 Sobic003G170300--Sobic002G180300 Sobic002G308300 Sobic002G308300 Sobic003G170300--Sobic002G308300 Sobic001G282500 Sobic001G282500 Sobic003G170300--Sobic001G282500 Sobic010G264300 Sobic010G264300 Sobic003G170300--Sobic010G264300 Sobic001G436300 Sobic001G436300 Sobic002G317600--Sobic001G436300 Sobic008G075200 Sobic008G075200 Sobic002G317600--Sobic008G075200 Sobic008G059900 Sobic008G059900 Sobic002G317600--Sobic008G059900 Sobic007G079600 Sobic007G079600 Sobic002G317600--Sobic007G079600 Sobic007G172600 Sobic007G172600 Sobic002G317600--Sobic007G172600 Sobic002G317600--Sobic003G248300 Sobic001G235700 Sobic001G235700 Sobic002G317600--Sobic001G235700 Sobic008G181400 Sobic008G181400 Sobic002G317600--Sobic008G181400 Sobic001G176900 Sobic001G176900 Sobic002G317600--Sobic001G176900 Sobic004G183200 Sobic004G183200 Sobic003G286200--Sobic004G183200 Sobic010G059300 Sobic010G059300 Sobic003G286200--Sobic010G059300 Sobic003G286200--Sobic010G264300 Sobic009G016500 Sobic009G016500 Sobic003G286200--Sobic009G016500 Sobic003G286200--Sobic002G308300 Sobic001G286200 Sobic001G286200 Sobic003G286200--Sobic001G286200 Sobic003G286200--Sobic001G473400 Sobic001G370700 Sobic001G370700 Sobic003G286200--Sobic001G370700 Sobic002G078300 Sobic002G078300 Sobic003G286200--Sobic002G078300 Sobic001G188700 Sobic001G188700 Sobic005G110526--Sobic001G188700 Sobic001G110300 Sobic001G110300 Sobic005G110526--Sobic001G110300 Sobic001G434400 Sobic001G434400 Sobic005G110526--Sobic001G434400 Sobic008G107900 Sobic008G107900 Sobic005G110526--Sobic008G107900 Sobic001G129400 Sobic001G129400 Sobic005G110526--Sobic001G129400 Sobic010G194200 Sobic010G194200 Sobic005G110526--Sobic010G194200 Sobic005G110526--Sobic003G248300 Sobic004G356300 Sobic004G356300 Sobic005G110526--Sobic004G356300 Sobic004G184000 Sobic004G184000 Sobic005G110526--Sobic004G184000 Sobic005G047000 Sobic005G047000 Sobic006G129900--Sobic005G047000 Sobic004G010700 Sobic004G010700 Sobic006G129900--Sobic004G010700 Sobic005G178300 Sobic005G178300 Sobic006G129900--Sobic005G178300 Sobic006G129900--Sobic010G258000 Sobic007G165300 Sobic007G165300 Sobic006G129900--Sobic007G165300 Sobic004G015300 Sobic004G015300 Sobic006G129900--Sobic004G015300 Sobic006G129900--Sobic003G248300 Sobic006G129900--Sobic001G176900 Sobic006G129900--Sobic005G110526 Sobic001G473400--Sobic010G258000 Sobic001G473400--Sobic003G170300 Sobic001G473400--Sobic009G016500 Sobic001G473400--Sobic009G240700 Sobic003G388700 Sobic003G388700 Sobic001G473400--Sobic003G388700 Sobic006G020900 Sobic006G020900 Sobic001G473400--Sobic006G020900 Sobic001G473400--Sobic001G282500 Sobic002G395000 Sobic002G395000 Sobic001G473400--Sobic002G395000 Sobic001G473400--Sobic002G308300 Sobic006G038200--Sobic003G170300 Sobic006G038200--Sobic004G282700 Sobic002G338400 Sobic002G338400 Sobic006G038200--Sobic002G338400 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic003G003000 Sobic003G003000 Sobic007G043600--Sobic003G003000 Sobic006G281200 Sobic006G281200 Sobic007G043600--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic007G043600--Sobic010G018000 Sobic007G043600--Sobic001G473400 Sobic006G079900 Sobic006G079900 Sobic007G043600--Sobic006G079900 Sobic009G188300 Sobic009G188300 Sobic007G043600--Sobic009G188300 Sobic009G124400 Sobic009G124400 Sobic007G043600--Sobic009G124400 Sobic004G137900 Sobic004G137900 Sobic007G043600--Sobic004G137900 Sobic006G276200 Sobic006G276200 Sobic007G043600--Sobic006G276200 Sobic010G258000--Sobic001G473400 Sobic006G203900 Sobic006G203900 Sobic010G258000--Sobic006G203900 Sobic001G035400 Sobic001G035400 Sobic010G258000--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic010G258000--Sobic001G073600 Sobic010G258000--Sobic003G388700 Sobic010G258000--Sobic009G016500 Sobic010G258000--Sobic003G170300 Sobic008G136800 Sobic008G136800 Sobic010G258000--Sobic008G136800 Sobic007G119600 Sobic007G119600 Sobic010G258000--Sobic007G119600
Octagon: transcription factors


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