Gene annotation
Transcriptome id Sobic.003G286200.1
Synonym Sb03g033700
Functional annotation expressed protein
UniProt C5XJ30
Pfam -
Panther DB PTHR35479 PTHR35479:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31490 : -
RAP-DB (Rice) LOC_Os01g53140.1 : expressed protein
MaizeGDB (Corn) Zm00025a040044
Brachypodium KQK09746
Barley HORVU3Hr1G071870.1 , HORVU3Hr1G071870.3 , HORVU3Hr1G071870.4 , HORVU3Hr1G071870.5 , HORVU3Hr1G071870.6
Wheat TraesCS3D02G290200 , TraesCS3B02G325200 , TraesCS3A02G290400
Populus -


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cDNA sequences
Sobic.003G286200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G183200 expressed protein -
2 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
3 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
4 Sobic.009G016500 expressed protein -
5 Sobic.002G308300 expressed protein -
6 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
7 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
8 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
9 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
10 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
11 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
12 Sobic.008G051800 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
13 Sobic.001G095632 - -
14 Sobic.003G296800 expressed protein -
15 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
16 Sobic.004G060500 fiber protein Fb15, putative, expressed -
17 Sobic.007G211500 expressed protein -
18 Sobic.002G296200 expressed protein -
19 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
20 Sobic.001G286300 - -


Gene co-expression network
sample Sobic003G286200 Sobic003G286200 Sobic004G183200 Sobic004G183200 Sobic003G286200--Sobic004G183200 Sobic010G059300 Sobic010G059300 Sobic003G286200--Sobic010G059300 Sobic010G264300 Sobic010G264300 Sobic003G286200--Sobic010G264300 Sobic009G016500 Sobic009G016500 Sobic003G286200--Sobic009G016500 Sobic002G308300 Sobic002G308300 Sobic003G286200--Sobic002G308300 Sobic001G286200 Sobic001G286200 Sobic003G286200--Sobic001G286200 Sobic001G473400 Sobic001G473400 Sobic003G286200--Sobic001G473400 Sobic001G370700 Sobic001G370700 Sobic003G286200--Sobic001G370700 Sobic002G078300 Sobic002G078300 Sobic003G286200--Sobic002G078300 Sobic003G296800 Sobic003G296800 Sobic004G183200--Sobic003G296800 Sobic001G519000 Sobic001G519000 Sobic004G183200--Sobic001G519000 Sobic004G183200--Sobic010G059300 Sobic007G211500 Sobic007G211500 Sobic004G183200--Sobic007G211500 Sobic002G263100 Sobic002G263100 Sobic004G183200--Sobic002G263100 Sobic001G047800 Sobic001G047800 Sobic004G183200--Sobic001G047800 Sobic007G161700 Sobic007G161700 Sobic004G183200--Sobic007G161700 Sobic004G183200--Sobic001G286200 Sobic004G060500 Sobic004G060500 Sobic004G183200--Sobic004G060500 Sobic010G059300--Sobic004G060500 Sobic010G059300--Sobic001G519000 Sobic010G059300--Sobic004G183200 Sobic010G059300--Sobic001G047800 Sobic010G059300--Sobic010G264300 Sobic003G218400 Sobic003G218400 Sobic010G059300--Sobic003G218400 Sobic001G095632 Sobic001G095632 Sobic010G059300--Sobic001G095632 Sobic002G418400 Sobic002G418400 Sobic010G059300--Sobic002G418400 Sobic010G059300--Sobic003G296800 Sobic010G264300--Sobic001G286200 Sobic010G264300--Sobic002G078300 Sobic010G264300--Sobic002G308300 Sobic010G264300--Sobic001G519000 Sobic002G356400 Sobic002G356400 Sobic010G264300--Sobic002G356400 Sobic009G212200 Sobic009G212200 Sobic010G264300--Sobic009G212200 Sobic010G264300--Sobic001G370700 Sobic001G304400 Sobic001G304400 Sobic010G264300--Sobic001G304400 Sobic002G180300 Sobic002G180300 Sobic010G264300--Sobic002G180300 Sobic001G347901 Sobic001G347901 Sobic009G016500--Sobic001G347901 Sobic009G016500--Sobic002G308300 Sobic009G016500--Sobic001G286200 Sobic009G016500--Sobic001G473400 Sobic009G016500--Sobic001G370700 Sobic009G016500--Sobic010G264300 Sobic010G258000 Sobic010G258000 Sobic009G016500--Sobic010G258000 Sobic009G016500--Sobic002G078300 Sobic008G136800 Sobic008G136800 Sobic009G016500--Sobic008G136800 Sobic002G308300--Sobic001G286200 Sobic002G308300--Sobic010G264300 Sobic002G308300--Sobic001G347901 Sobic002G308300--Sobic009G016500 Sobic002G309700 Sobic002G309700 Sobic002G308300--Sobic002G309700 Sobic001G282500 Sobic001G282500 Sobic002G308300--Sobic001G282500 Sobic002G308300--Sobic001G370700 Sobic002G308300--Sobic002G180300 Sobic002G308300--Sobic002G078300 Sobic001G286200--Sobic002G078300 Sobic001G286200--Sobic010G264300 Sobic001G286200--Sobic001G304400 Sobic001G286200--Sobic007G211500 Sobic002G296200 Sobic002G296200 Sobic001G286200--Sobic002G296200 Sobic007G134900 Sobic007G134900 Sobic001G286200--Sobic007G134900 Sobic001G286200--Sobic009G212200 Sobic001G286200--Sobic002G308300 Sobic001G286200--Sobic002G263100 Sobic001G473400--Sobic010G258000 Sobic003G170300 Sobic003G170300 Sobic001G473400--Sobic003G170300 Sobic001G473400--Sobic009G016500 Sobic009G240700 Sobic009G240700 Sobic001G473400--Sobic009G240700 Sobic003G388700 Sobic003G388700 Sobic001G473400--Sobic003G388700 Sobic006G020900 Sobic006G020900 Sobic001G473400--Sobic006G020900 Sobic001G473400--Sobic001G282500 Sobic002G395000 Sobic002G395000 Sobic001G473400--Sobic002G395000 Sobic001G473400--Sobic002G308300 Sobic001G370700--Sobic010G264300 Sobic001G370700--Sobic002G309700 Sobic001G370700--Sobic002G308300 Sobic001G370700--Sobic002G180300 Sobic001G370700--Sobic002G078300 Sobic001G370700--Sobic001G347901 Sobic003G261100 Sobic003G261100 Sobic001G370700--Sobic003G261100 Sobic009G179100 Sobic009G179100 Sobic001G370700--Sobic009G179100 Sobic004G260200 Sobic004G260200 Sobic001G370700--Sobic004G260200 Sobic002G078300--Sobic001G286200 Sobic002G078300--Sobic010G264300 Sobic002G078300--Sobic004G260200 Sobic002G078300--Sobic002G395000 Sobic002G078300--Sobic002G309700 Sobic002G078300--Sobic007G211500 Sobic002G078300--Sobic002G356400 Sobic002G078300--Sobic001G370700 Sobic002G078300--Sobic002G308300
Octagon: transcription factors


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