Gene annotation
Transcriptome id Sobic.010G018500.2
Synonym Sb10g001790
Functional annotation expressed protein
UniProt A0A194YGW1
Pfam -
Panther DB PTHR13624
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52180 : -
RAP-DB (Rice) LOC_Os06g03820.1 : expressed protein
MaizeGDB (Corn) Zm00025a050194
Brachypodium PNT76567
Barley HORVU7Hr1G011090.1 , HORVU6Hr1G001110.1 , HORVU6Hr1G001110.2 , HORVU7Hr1G011210.4 , HORVU7Hr1G011210.2 , HORVU7Hr1G011210.3 , HORVU7Hr1G011210.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
2 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
3 Sobic.003G266400 clathrin assembly protein, putative, expressed -
4 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
5 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
6 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
7 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
8 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
9 Sobic.004G356300 expressed protein -
10 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
11 Sobic.002G111500 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
12 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
13 Sobic.002G222200 OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed K09584: PDIA6, protein disulfide-isomerase A6
14 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
15 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
16 Sobic.004G007700 pentatricopeptide, putative, expressed -
17 Sobic.001G116000 dynamin family protein, putative, expressed K01528: dynamin 1/3
18 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
19 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
20 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu


Gene co-expression network
sample Sobic010G018500 Sobic010G018500 Sobic001G146000 Sobic001G146000 Sobic010G018500--Sobic001G146000 Sobic002G232400 Sobic002G232400 Sobic010G018500--Sobic002G232400 Sobic003G266400 Sobic003G266400 Sobic010G018500--Sobic003G266400 Sobic001G543400 Sobic001G543400 Sobic010G018500--Sobic001G543400 Sobic008G084100 Sobic008G084100 Sobic010G018500--Sobic008G084100 Sobic002G153000 Sobic002G153000 Sobic010G018500--Sobic002G153000 Sobic002G101300 Sobic002G101300 Sobic010G018500--Sobic002G101300 Sobic010G042600 Sobic010G042600 Sobic010G018500--Sobic010G042600 Sobic004G356300 Sobic004G356300 Sobic010G018500--Sobic004G356300 Sobic001G146000--Sobic010G018500 Sobic001G146000--Sobic003G266400 Sobic002G111500 Sobic002G111500 Sobic001G146000--Sobic002G111500 Sobic002G347400 Sobic002G347400 Sobic001G146000--Sobic002G347400 Sobic008G057900 Sobic008G057900 Sobic001G146000--Sobic008G057900 Sobic006G278100 Sobic006G278100 Sobic001G146000--Sobic006G278100 Sobic001G146000--Sobic008G084100 Sobic003G444200 Sobic003G444200 Sobic001G146000--Sobic003G444200 Sobic001G131600 Sobic001G131600 Sobic001G146000--Sobic001G131600 Sobic002G232400--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic002G232400--Sobic002G090500 Sobic001G352800 Sobic001G352800 Sobic002G232400--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic002G232400--Sobic001G192700 Sobic002G268700 Sobic002G268700 Sobic002G232400--Sobic002G268700 Sobic010G002800 Sobic010G002800 Sobic002G232400--Sobic010G002800 Sobic004G218600 Sobic004G218600 Sobic002G232400--Sobic004G218600 Sobic002G232400--Sobic008G084100 Sobic002G232400--Sobic010G018500 Sobic003G364900 Sobic003G364900 Sobic003G266400--Sobic003G364900 Sobic003G266400--Sobic010G018500 Sobic003G266400--Sobic002G111500 Sobic003G266400--Sobic001G543400 Sobic003G266400--Sobic002G090500 Sobic003G266400--Sobic002G153000 Sobic003G266400--Sobic002G232400 Sobic003G266400--Sobic010G042600 Sobic003G266400--Sobic001G146000 Sobic001G543400--Sobic002G153000 Sobic002G070300 Sobic002G070300 Sobic001G543400--Sobic002G070300 Sobic001G543400--Sobic008G057900 Sobic003G260600 Sobic003G260600 Sobic001G543400--Sobic003G260600 Sobic004G017900 Sobic004G017900 Sobic001G543400--Sobic004G017900 Sobic007G014700 Sobic007G014700 Sobic001G543400--Sobic007G014700 Sobic001G543400--Sobic004G218600 Sobic004G261800 Sobic004G261800 Sobic001G543400--Sobic004G261800 Sobic008G132200 Sobic008G132200 Sobic001G543400--Sobic008G132200 Sobic010G277000 Sobic010G277000 Sobic008G084100--Sobic010G277000 Sobic001G035400 Sobic001G035400 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic001G073600 Sobic001G073600 Sobic008G084100--Sobic001G073600 Sobic007G048700 Sobic007G048700 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic001G413100 Sobic001G413100 Sobic008G084100--Sobic001G413100 Sobic008G084100--Sobic002G232400 Sobic006G203900 Sobic006G203900 Sobic008G084100--Sobic006G203900 Sobic002G153000--Sobic002G090500 Sobic002G153000--Sobic001G543400 Sobic002G153000--Sobic004G218600 Sobic002G153000--Sobic002G232400 Sobic002G153000--Sobic002G070300 Sobic002G153000--Sobic008G057900 Sobic002G153000--Sobic004G261800 Sobic001G011000 Sobic001G011000 Sobic002G153000--Sobic001G011000 Sobic002G153000--Sobic001G352800 Sobic010G101600 Sobic010G101600 Sobic002G101300--Sobic010G101600 Sobic002G101300--Sobic010G018500 Sobic002G368600 Sobic002G368600 Sobic002G101300--Sobic002G368600 Sobic003G261100 Sobic003G261100 Sobic002G101300--Sobic003G261100 Sobic003G045600 Sobic003G045600 Sobic002G101300--Sobic003G045600 Sobic006G259401 Sobic006G259401 Sobic002G101300--Sobic006G259401 Sobic002G271300 Sobic002G271300 Sobic002G101300--Sobic002G271300 Sobic004G257000 Sobic004G257000 Sobic002G101300--Sobic004G257000 Sobic001G392200 Sobic001G392200 Sobic002G101300--Sobic001G392200 Sobic003G118100 Sobic003G118100 Sobic010G042600--Sobic003G118100 Sobic009G206500 Sobic009G206500 Sobic010G042600--Sobic009G206500 Sobic001G144200 Sobic001G144200 Sobic010G042600--Sobic001G144200 Sobic006G267500 Sobic006G267500 Sobic010G042600--Sobic006G267500 Sobic010G042600--Sobic003G266400 Sobic010G042600--Sobic010G018500 Sobic001G196000 Sobic001G196000 Sobic010G042600--Sobic001G196000 Sobic006G035600 Sobic006G035600 Sobic010G042600--Sobic006G035600 Sobic001G500400 Sobic001G500400 Sobic010G042600--Sobic001G500400 Sobic004G007700 Sobic004G007700 Sobic004G356300--Sobic004G007700 Sobic004G356300--Sobic001G011000 Sobic003G075200 Sobic003G075200 Sobic004G356300--Sobic003G075200 Sobic002G367800 Sobic002G367800 Sobic004G356300--Sobic002G367800 Sobic004G356300--Sobic002G090500 Sobic004G356300--Sobic008G057900 Sobic001G176900 Sobic001G176900 Sobic004G356300--Sobic001G176900 Sobic010G134100 Sobic010G134100 Sobic004G356300--Sobic010G134100 Sobic002G071100 Sobic002G071100 Sobic004G356300--Sobic002G071100
Octagon: transcription factors


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