Gene annotation
Transcriptome id Sobic.002G222200.1
Synonym Sb02g026300, ATPDI10, PDI10, ATPDIL2-2, PDIL2-2
Functional annotation OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed
UniProt C5X277
Pfam PF13848 PF00085
Panther DB PTHR18929 PTHR18929:SF38
NCBI CDD KOG0191; Thioredoxin/protein disulfide isomerase
KEGG Orthology K09584; PDIA6, protein disulfide-isomerase A6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04980 : PDI-like 2-2
RAP-DB (Rice) LOC_Os09g27830.1 : OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed
MaizeGDB (Corn) Zm00025a014042 , Zm00025a047224
Brachypodium KQJ90478
Barley HORVU5Hr1G067570.1
Wheat TraesCS5D02G241200 , TraesCS5A02G234400 , TraesCS5B02G232900
Populus -


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cDNA sequences
Sobic.002G222200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
2 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
3 Sobic.008G018200 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
4 Sobic.004G011700 DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
5 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
6 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
7 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
8 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
9 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
10 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
11 Sobic.004G356300 expressed protein -
12 Sobic.008G149500 expressed protein -
13 Sobic.005G112100 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
14 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
15 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
16 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
17 Sobic.001G347700 protein phosphotase protein, putative, expressed -
18 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
19 Sobic.010G018500 expressed protein -
20 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase


Gene co-expression network
sample Sobic002G222200 Sobic002G222200 Sobic001G073600 Sobic001G073600 Sobic002G222200--Sobic001G073600 Sobic010G002800 Sobic010G002800 Sobic002G222200--Sobic010G002800 Sobic008G018200 Sobic008G018200 Sobic002G222200--Sobic008G018200 Sobic004G011700 Sobic004G011700 Sobic002G222200--Sobic004G011700 Sobic002G232400 Sobic002G232400 Sobic002G222200--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic002G222200--Sobic001G135200 Sobic009G224400 Sobic009G224400 Sobic002G222200--Sobic009G224400 Sobic001G352800 Sobic001G352800 Sobic002G222200--Sobic001G352800 Sobic007G119600 Sobic007G119600 Sobic002G222200--Sobic007G119600 Sobic009G191400 Sobic009G191400 Sobic001G073600--Sobic009G191400 Sobic001G073600--Sobic009G224400 Sobic003G135600 Sobic003G135600 Sobic001G073600--Sobic003G135600 Sobic002G395000 Sobic002G395000 Sobic001G073600--Sobic002G395000 Sobic004G344800 Sobic004G344800 Sobic001G073600--Sobic004G344800 Sobic001G073600--Sobic007G119600 Sobic004G347600 Sobic004G347600 Sobic001G073600--Sobic004G347600 Sobic001G458800 Sobic001G458800 Sobic001G073600--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic001G073600--Sobic004G155100 Sobic010G002800--Sobic001G352800 Sobic003G085500 Sobic003G085500 Sobic010G002800--Sobic003G085500 Sobic003G388700 Sobic003G388700 Sobic010G002800--Sobic003G388700 Sobic010G002800--Sobic002G232400 Sobic001G309200 Sobic001G309200 Sobic010G002800--Sobic001G309200 Sobic004G186100 Sobic004G186100 Sobic010G002800--Sobic004G186100 Sobic010G002800--Sobic002G222200 Sobic010G002800--Sobic001G073600 Sobic004G007700 Sobic004G007700 Sobic010G002800--Sobic004G007700 Sobic002G420100 Sobic002G420100 Sobic008G018200--Sobic002G420100 Sobic002G308000 Sobic002G308000 Sobic008G018200--Sobic002G308000 Sobic007G189100 Sobic007G189100 Sobic008G018200--Sobic007G189100 Sobic008G018200--Sobic002G222200 Sobic001G528100 Sobic001G528100 Sobic008G018200--Sobic001G528100 Sobic002G392400 Sobic002G392400 Sobic008G018200--Sobic002G392400 Sobic010G253200 Sobic010G253200 Sobic008G018200--Sobic010G253200 Sobic003G293400 Sobic003G293400 Sobic008G018200--Sobic003G293400 Sobic008G018200--Sobic004G011700 Sobic004G011700--Sobic002G222200 Sobic004G011700--Sobic008G018200 Sobic004G011700--Sobic001G309200 Sobic003G201500 Sobic003G201500 Sobic004G011700--Sobic003G201500 Sobic003G308300 Sobic003G308300 Sobic004G011700--Sobic003G308300 Sobic003G404100 Sobic003G404100 Sobic004G011700--Sobic003G404100 Sobic001G282200 Sobic001G282200 Sobic004G011700--Sobic001G282200 Sobic008G011800 Sobic008G011800 Sobic004G011700--Sobic008G011800 Sobic004G100100 Sobic004G100100 Sobic004G011700--Sobic004G100100 Sobic002G153000 Sobic002G153000 Sobic002G232400--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic002G232400--Sobic002G090500 Sobic002G232400--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic002G232400--Sobic001G192700 Sobic002G268700 Sobic002G268700 Sobic002G232400--Sobic002G268700 Sobic002G232400--Sobic010G002800 Sobic004G218600 Sobic004G218600 Sobic002G232400--Sobic004G218600 Sobic008G084100 Sobic008G084100 Sobic002G232400--Sobic008G084100 Sobic010G018500 Sobic010G018500 Sobic002G232400--Sobic010G018500 Sobic003G044700 Sobic003G044700 Sobic001G135200--Sobic003G044700 Sobic001G135200--Sobic001G192700 Sobic003G016300 Sobic003G016300 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic002G352200 Sobic002G352200 Sobic001G135200--Sobic002G352200 Sobic001G135200--Sobic004G100100 Sobic009G244900 Sobic009G244900 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic006G271000 Sobic006G271000 Sobic001G135200--Sobic006G271000 Sobic009G224400--Sobic001G073600 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic009G224400--Sobic007G119600 Sobic009G224400--Sobic003G135600 Sobic009G224400--Sobic001G458800 Sobic009G224400--Sobic004G155100 Sobic003G034900 Sobic003G034900 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic001G219800 Sobic001G219800 Sobic001G352800--Sobic001G219800 Sobic001G352800--Sobic002G232400 Sobic002G255400 Sobic002G255400 Sobic001G352800--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic001G352800--Sobic003G260600 Sobic003G075200 Sobic003G075200 Sobic001G352800--Sobic003G075200 Sobic001G352800--Sobic003G085500 Sobic001G352800--Sobic002G090500 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic007G119600--Sobic009G224400 Sobic007G119600--Sobic009G191400 Sobic006G041800 Sobic006G041800 Sobic007G119600--Sobic006G041800 Sobic001G457000 Sobic001G457000 Sobic007G119600--Sobic001G457000 Sobic007G119600--Sobic001G073600 Sobic007G119600--Sobic002G255400 Sobic003G028200 Sobic003G028200 Sobic007G119600--Sobic003G028200 Sobic007G119600--Sobic003G388700 Sobic007G119600--Sobic003G260600
Octagon: transcription factors


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