Gene annotation
Transcriptome id Sobic.008G149500.4
Synonym
Functional annotation expressed protein
UniProt A0A1Z5R6Y1
Pfam -
Panther DB PTHR33156 PTHR33156:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15000 : -
RAP-DB (Rice) LOC_Os03g42480.1 : expressed protein
MaizeGDB (Corn) Zm00025a004495
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G100100 expressed protein -
2 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
3 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
4 Sobic.002G222200 OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed K09584: PDIA6, protein disulfide-isomerase A6
5 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
6 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
7 Sobic.003G016300 SFT2, putative, expressed -
8 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
9 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
10 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
11 Sobic.010G231700 expressed protein -
12 Sobic.008G065300 - -
13 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
14 Sobic.009G215300 fiber protein Fb11, putative, expressed -
15 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
16 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
17 Sobic.002G186500 UPF0041 domain containing protein, putative, expressed -
18 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
19 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
20 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein


Gene co-expression network
sample Sobic008G149500 Sobic008G149500 Sobic004G100100 Sobic004G100100 Sobic008G149500--Sobic004G100100 Sobic001G135200 Sobic001G135200 Sobic008G149500--Sobic001G135200 Sobic009G259200 Sobic009G259200 Sobic008G149500--Sobic009G259200 Sobic002G222200 Sobic002G222200 Sobic008G149500--Sobic002G222200 Sobic004G155100 Sobic004G155100 Sobic008G149500--Sobic004G155100 Sobic001G501600 Sobic001G501600 Sobic008G149500--Sobic001G501600 Sobic003G016300 Sobic003G016300 Sobic008G149500--Sobic003G016300 Sobic009G224400 Sobic009G224400 Sobic008G149500--Sobic009G224400 Sobic009G244900 Sobic009G244900 Sobic008G149500--Sobic009G244900 Sobic003G260600 Sobic003G260600 Sobic004G100100--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic004G100100--Sobic002G255400 Sobic003G284100 Sobic003G284100 Sobic004G100100--Sobic003G284100 Sobic007G014700 Sobic007G014700 Sobic004G100100--Sobic007G014700 Sobic001G282200 Sobic001G282200 Sobic004G100100--Sobic001G282200 Sobic006G153200 Sobic006G153200 Sobic004G100100--Sobic006G153200 Sobic008G018300 Sobic008G018300 Sobic004G100100--Sobic008G018300 Sobic003G013700 Sobic003G013700 Sobic004G100100--Sobic003G013700 Sobic001G309200 Sobic001G309200 Sobic004G100100--Sobic001G309200 Sobic003G044700 Sobic003G044700 Sobic001G135200--Sobic003G044700 Sobic001G192700 Sobic001G192700 Sobic001G135200--Sobic001G192700 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic002G352200 Sobic002G352200 Sobic001G135200--Sobic002G352200 Sobic001G135200--Sobic004G100100 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic006G271000 Sobic006G271000 Sobic001G135200--Sobic006G271000 Sobic001G457000 Sobic001G457000 Sobic009G259200--Sobic001G457000 Sobic009G259200--Sobic009G224400 Sobic009G259200--Sobic003G260600 Sobic007G119600 Sobic007G119600 Sobic009G259200--Sobic007G119600 Sobic003G028200 Sobic003G028200 Sobic009G259200--Sobic003G028200 Sobic009G259200--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic009G259200--Sobic003G201500 Sobic004G173700 Sobic004G173700 Sobic009G259200--Sobic004G173700 Sobic003G089100 Sobic003G089100 Sobic009G259200--Sobic003G089100 Sobic001G073600 Sobic001G073600 Sobic002G222200--Sobic001G073600 Sobic010G002800 Sobic010G002800 Sobic002G222200--Sobic010G002800 Sobic008G018200 Sobic008G018200 Sobic002G222200--Sobic008G018200 Sobic004G011700 Sobic004G011700 Sobic002G222200--Sobic004G011700 Sobic002G232400 Sobic002G232400 Sobic002G222200--Sobic002G232400 Sobic002G222200--Sobic001G135200 Sobic002G222200--Sobic009G224400 Sobic001G352800 Sobic001G352800 Sobic002G222200--Sobic001G352800 Sobic002G222200--Sobic007G119600 Sobic003G135600 Sobic003G135600 Sobic004G155100--Sobic003G135600 Sobic002G309700 Sobic002G309700 Sobic004G155100--Sobic002G309700 Sobic002G395000 Sobic002G395000 Sobic004G155100--Sobic002G395000 Sobic004G155100--Sobic009G224400 Sobic004G260200 Sobic004G260200 Sobic004G155100--Sobic004G260200 Sobic004G155100--Sobic001G073600 Sobic009G240700 Sobic009G240700 Sobic004G155100--Sobic009G240700 Sobic001G206700 Sobic001G206700 Sobic004G155100--Sobic001G206700 Sobic002G180300 Sobic002G180300 Sobic004G155100--Sobic002G180300 Sobic001G370700 Sobic001G370700 Sobic001G501600--Sobic001G370700 Sobic006G013000 Sobic006G013000 Sobic001G501600--Sobic006G013000 Sobic007G161700 Sobic007G161700 Sobic001G501600--Sobic007G161700 Sobic003G261100 Sobic003G261100 Sobic001G501600--Sobic003G261100 Sobic001G501600--Sobic002G180300 Sobic007G134900 Sobic007G134900 Sobic001G501600--Sobic007G134900 Sobic002G296200 Sobic002G296200 Sobic001G501600--Sobic002G296200 Sobic004G056400 Sobic004G056400 Sobic001G501600--Sobic004G056400 Sobic010G089500 Sobic010G089500 Sobic001G501600--Sobic010G089500 Sobic003G016300--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic003G016300--Sobic002G217500 Sobic003G016300--Sobic001G192700 Sobic001G219800 Sobic001G219800 Sobic003G016300--Sobic001G219800 Sobic003G016300--Sobic008G018300 Sobic006G203900 Sobic006G203900 Sobic003G016300--Sobic006G203900 Sobic003G016300--Sobic002G255400 Sobic009G211900 Sobic009G211900 Sobic003G016300--Sobic009G211900 Sobic002G420600 Sobic002G420600 Sobic003G016300--Sobic002G420600 Sobic009G224400--Sobic001G073600 Sobic009G191400 Sobic009G191400 Sobic009G224400--Sobic009G191400 Sobic009G224400--Sobic002G395000 Sobic009G224400--Sobic007G119600 Sobic009G224400--Sobic003G135600 Sobic001G458800 Sobic001G458800 Sobic009G224400--Sobic001G458800 Sobic009G224400--Sobic004G155100 Sobic003G034900 Sobic003G034900 Sobic009G224400--Sobic003G034900 Sobic002G262200 Sobic002G262200 Sobic009G224400--Sobic002G262200 Sobic007G192500 Sobic007G192500 Sobic009G244900--Sobic007G192500 Sobic002G201700 Sobic002G201700 Sobic009G244900--Sobic002G201700 Sobic009G244900--Sobic004G261800 Sobic010G101600 Sobic010G101600 Sobic009G244900--Sobic010G101600 Sobic002G167100 Sobic002G167100 Sobic009G244900--Sobic002G167100 Sobic002G153000 Sobic002G153000 Sobic009G244900--Sobic002G153000 Sobic009G244900--Sobic001G135200 Sobic010G250300 Sobic010G250300 Sobic009G244900--Sobic010G250300 Sobic004G069400 Sobic004G069400 Sobic009G244900--Sobic004G069400
Octagon: transcription factors


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