Gene annotation
Transcriptome id Sobic.010G231700.2
Synonym Sb10g027440
Functional annotation expressed protein
UniProt A0A1W0VUG1
Pfam -
Panther DB PTHR36706 PTHR36706:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05205 : -
RAP-DB (Rice) LOC_Os06g46700.1 : expressed protein
MaizeGDB (Corn) Zm00025a035069
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G231700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
2 Sobic.002G124900 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
3 Sobic.009G215300 fiber protein Fb11, putative, expressed -
4 Sobic.003G049800 protein of unknown function domain containing protein, expressed -
5 Sobic.002G246800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
6 Sobic.003G335300 E2F-related protein, putative, expressed -
7 Sobic.002G186500 UPF0041 domain containing protein, putative, expressed -
8 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
9 Sobic.003G016300 SFT2, putative, expressed -
10 Sobic.004G100100 expressed protein -
11 Sobic.001G181500 expressed protein -
12 Sobic.004G173700 SLL1 protein, putative, expressed -
13 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
14 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
15 Sobic.003G284100 expressed protein -
16 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
17 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
18 Sobic.001G282200 ribosomal protein L35, putative, expressed -
19 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
20 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -


Gene co-expression network
sample Sobic010G231700 Sobic010G231700 Sobic002G352200 Sobic002G352200 Sobic010G231700--Sobic002G352200 Sobic002G124900 Sobic002G124900 Sobic010G231700--Sobic002G124900 Sobic009G215300 Sobic009G215300 Sobic010G231700--Sobic009G215300 Sobic003G049800 Sobic003G049800 Sobic010G231700--Sobic003G049800 Sobic002G246800 Sobic002G246800 Sobic010G231700--Sobic002G246800 Sobic003G335300 Sobic003G335300 Sobic010G231700--Sobic003G335300 Sobic002G186500 Sobic002G186500 Sobic010G231700--Sobic002G186500 Sobic007G013900 Sobic007G013900 Sobic010G231700--Sobic007G013900 Sobic003G016300 Sobic003G016300 Sobic010G231700--Sobic003G016300 Sobic002G420600 Sobic002G420600 Sobic002G352200--Sobic002G420600 Sobic002G352200--Sobic003G016300 Sobic008G018300 Sobic008G018300 Sobic002G352200--Sobic008G018300 Sobic002G255400 Sobic002G255400 Sobic002G352200--Sobic002G255400 Sobic004G173700 Sobic004G173700 Sobic002G352200--Sobic004G173700 Sobic003G260600 Sobic003G260600 Sobic002G352200--Sobic003G260600 Sobic009G224400 Sobic009G224400 Sobic002G352200--Sobic009G224400 Sobic002G352200--Sobic002G124900 Sobic001G073600 Sobic001G073600 Sobic002G352200--Sobic001G073600 Sobic002G124900--Sobic002G352200 Sobic004G261800 Sobic004G261800 Sobic002G124900--Sobic004G261800 Sobic002G124900--Sobic010G231700 Sobic002G124900--Sobic002G420600 Sobic003G013700 Sobic003G013700 Sobic002G124900--Sobic003G013700 Sobic001G303900 Sobic001G303900 Sobic002G124900--Sobic001G303900 Sobic002G124900--Sobic004G173700 Sobic007G014700 Sobic007G014700 Sobic002G124900--Sobic007G014700 Sobic004G247500 Sobic004G247500 Sobic002G124900--Sobic004G247500 Sobic002G309700 Sobic002G309700 Sobic009G215300--Sobic002G309700 Sobic001G181500 Sobic001G181500 Sobic009G215300--Sobic001G181500 Sobic001G047800 Sobic001G047800 Sobic009G215300--Sobic001G047800 Sobic004G260200 Sobic004G260200 Sobic009G215300--Sobic004G260200 Sobic009G211900 Sobic009G211900 Sobic009G215300--Sobic009G211900 Sobic009G215300--Sobic007G013900 Sobic001G282500 Sobic001G282500 Sobic009G215300--Sobic001G282500 Sobic003G135600 Sobic003G135600 Sobic009G215300--Sobic003G135600 Sobic001G404800 Sobic001G404800 Sobic009G215300--Sobic001G404800 Sobic003G049800--Sobic010G231700 Sobic003G049800--Sobic002G352200 Sobic003G049800--Sobic002G124900 Sobic003G074900 Sobic003G074900 Sobic003G049800--Sobic003G074900 Sobic003G049800--Sobic003G016300 Sobic007G159700 Sobic007G159700 Sobic003G049800--Sobic007G159700 Sobic006G271000 Sobic006G271000 Sobic003G049800--Sobic006G271000 Sobic009G206700 Sobic009G206700 Sobic003G049800--Sobic009G206700 Sobic006G124300 Sobic006G124300 Sobic003G049800--Sobic006G124300 Sobic001G031800 Sobic001G031800 Sobic002G246800--Sobic001G031800 Sobic002G246800--Sobic003G335300 Sobic002G246800--Sobic001G181500 Sobic009G209001 Sobic009G209001 Sobic002G246800--Sobic009G209001 Sobic002G246800--Sobic010G231700 Sobic007G141100 Sobic007G141100 Sobic002G246800--Sobic007G141100 Sobic010G031000 Sobic010G031000 Sobic002G246800--Sobic010G031000 Sobic002G246800--Sobic009G215300 Sobic002G246800--Sobic006G124300 Sobic001G365700 Sobic001G365700 Sobic003G335300--Sobic001G365700 Sobic001G482800 Sobic001G482800 Sobic003G335300--Sobic001G482800 Sobic003G335300--Sobic004G173700 Sobic004G232500 Sobic004G232500 Sobic003G335300--Sobic004G232500 Sobic003G284100 Sobic003G284100 Sobic003G335300--Sobic003G284100 Sobic003G137600 Sobic003G137600 Sobic003G335300--Sobic003G137600 Sobic006G118400 Sobic006G118400 Sobic003G335300--Sobic006G118400 Sobic004G247700 Sobic004G247700 Sobic003G335300--Sobic004G247700 Sobic003G335300--Sobic002G246800 Sobic007G012900 Sobic007G012900 Sobic002G186500--Sobic007G012900 Sobic001G387200 Sobic001G387200 Sobic002G186500--Sobic001G387200 Sobic002G186500--Sobic008G018300 Sobic002G186500--Sobic002G255400 Sobic002G186500--Sobic004G173700 Sobic002G186500--Sobic010G231700 Sobic004G100100 Sobic004G100100 Sobic002G186500--Sobic004G100100 Sobic006G041800 Sobic006G041800 Sobic002G186500--Sobic006G041800 Sobic007G119600 Sobic007G119600 Sobic002G186500--Sobic007G119600 Sobic007G013900--Sobic009G215300 Sobic004G159000 Sobic004G159000 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic007G013900--Sobic002G395000 Sobic008G136800 Sobic008G136800 Sobic007G013900--Sobic008G136800 Sobic003G016300--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic003G016300--Sobic002G217500 Sobic001G192700 Sobic001G192700 Sobic003G016300--Sobic001G192700 Sobic001G219800 Sobic001G219800 Sobic003G016300--Sobic001G219800 Sobic003G016300--Sobic008G018300 Sobic006G203900 Sobic006G203900 Sobic003G016300--Sobic006G203900 Sobic003G016300--Sobic002G255400 Sobic003G016300--Sobic009G211900 Sobic003G016300--Sobic002G420600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.