Gene annotation
Transcriptome id Sobic.001G282200.2
Synonym Sb01g027760
Functional annotation ribosomal protein L35, putative, expressed
UniProt A0A1Z5S7Z6
Pfam PF01632
Panther DB PTHR36400
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT5G45590 : Ribosomal protein L35
RAP-DB (Rice) LOC_Os10g42860.1 : ribosomal protein L35, putative, expressed
MaizeGDB (Corn) Zm00025a003577
Brachypodium KQJ97998
Barley HORVU1Hr1G051250.1 , HORVU1Hr1G051250.2
Wheat TraesCS1D02G201000 , TraesCS1A02G197500 , TraesCS1B02G212100
Populus -


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cDNA sequences
Sobic.001G282200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
2 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
3 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
5 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
6 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
7 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
8 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
9 Sobic.004G100100 expressed protein -
10 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
12 Sobic.003G349900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
13 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
14 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
15 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
16 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
17 Sobic.004G038500 cyclin-related protein, putative, expressed -
18 Sobic.004G284800 protein kinase, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
19 Sobic.002G362500 expressed protein -
20 Sobic.003G028200 expressed protein -


Gene co-expression network
sample Sobic001G282200 Sobic001G282200 Sobic003G260600 Sobic003G260600 Sobic001G282200--Sobic003G260600 Sobic002G420600 Sobic002G420600 Sobic001G282200--Sobic002G420600 Sobic003G089100 Sobic003G089100 Sobic001G282200--Sobic003G089100 Sobic003G201500 Sobic003G201500 Sobic001G282200--Sobic003G201500 Sobic002G255400 Sobic002G255400 Sobic001G282200--Sobic002G255400 Sobic008G018300 Sobic008G018300 Sobic001G282200--Sobic008G018300 Sobic002G397900 Sobic002G397900 Sobic001G282200--Sobic002G397900 Sobic003G013700 Sobic003G013700 Sobic001G282200--Sobic003G013700 Sobic004G100100 Sobic004G100100 Sobic001G282200--Sobic004G100100 Sobic003G260600--Sobic002G255400 Sobic003G260600--Sobic003G201500 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic007G014700 Sobic007G014700 Sobic003G260600--Sobic007G014700 Sobic002G420600--Sobic003G089100 Sobic004G173700 Sobic004G173700 Sobic002G420600--Sobic004G173700 Sobic006G120900 Sobic006G120900 Sobic002G420600--Sobic006G120900 Sobic002G420600--Sobic003G201500 Sobic002G352200 Sobic002G352200 Sobic002G420600--Sobic002G352200 Sobic002G420600--Sobic002G255400 Sobic001G303900 Sobic001G303900 Sobic002G420600--Sobic001G303900 Sobic002G420600--Sobic003G260600 Sobic002G420600--Sobic003G372200 Sobic003G089100--Sobic003G201500 Sobic003G089100--Sobic003G013700 Sobic003G089100--Sobic003G260600 Sobic003G089100--Sobic002G255400 Sobic004G113600 Sobic004G113600 Sobic003G089100--Sobic004G113600 Sobic001G400000 Sobic001G400000 Sobic003G089100--Sobic001G400000 Sobic003G089100--Sobic002G420600 Sobic005G050400 Sobic005G050400 Sobic003G089100--Sobic005G050400 Sobic001G356200 Sobic001G356200 Sobic003G089100--Sobic001G356200 Sobic003G201500--Sobic003G089100 Sobic003G201500--Sobic003G260600 Sobic003G201500--Sobic003G372200 Sobic003G201500--Sobic002G420600 Sobic003G201500--Sobic002G255400 Sobic003G201500--Sobic001G378800 Sobic003G201500--Sobic006G120900 Sobic003G201500--Sobic001G400000 Sobic004G038500 Sobic004G038500 Sobic003G201500--Sobic004G038500 Sobic002G255400--Sobic003G260600 Sobic002G255400--Sobic003G089100 Sobic002G255400--Sobic007G014700 Sobic002G255400--Sobic008G018300 Sobic002G255400--Sobic002G420600 Sobic002G255400--Sobic003G201500 Sobic002G255400--Sobic003G013700 Sobic002G255400--Sobic002G352200 Sobic001G387200 Sobic001G387200 Sobic002G255400--Sobic001G387200 Sobic008G018300--Sobic002G255400 Sobic008G018300--Sobic002G352200 Sobic008G018300--Sobic001G387200 Sobic008G018300--Sobic004G173700 Sobic008G018300--Sobic002G420600 Sobic008G018300--Sobic003G260600 Sobic008G018300--Sobic001G282200 Sobic003G129900 Sobic003G129900 Sobic008G018300--Sobic003G129900 Sobic003G016300 Sobic003G016300 Sobic008G018300--Sobic003G016300 Sobic003G349900 Sobic003G349900 Sobic002G397900--Sobic003G349900 Sobic001G280500 Sobic001G280500 Sobic002G397900--Sobic001G280500 Sobic002G397900--Sobic003G089100 Sobic004G074600 Sobic004G074600 Sobic002G397900--Sobic004G074600 Sobic002G213900 Sobic002G213900 Sobic002G397900--Sobic002G213900 Sobic002G414800 Sobic002G414800 Sobic002G397900--Sobic002G414800 Sobic002G054700 Sobic002G054700 Sobic002G397900--Sobic002G054700 Sobic002G397900--Sobic001G356200 Sobic002G397900--Sobic003G201500 Sobic004G261800 Sobic004G261800 Sobic003G013700--Sobic004G261800 Sobic003G013700--Sobic005G050400 Sobic001G072000 Sobic001G072000 Sobic003G013700--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic003G013700--Sobic008G156600 Sobic003G013700--Sobic003G089100 Sobic009G163100 Sobic009G163100 Sobic003G013700--Sobic009G163100 Sobic001G322400 Sobic001G322400 Sobic003G013700--Sobic001G322400 Sobic002G172401 Sobic002G172401 Sobic003G013700--Sobic002G172401 Sobic001G112600 Sobic001G112600 Sobic003G013700--Sobic001G112600 Sobic004G100100--Sobic003G260600 Sobic004G100100--Sobic002G255400 Sobic003G284100 Sobic003G284100 Sobic004G100100--Sobic003G284100 Sobic004G100100--Sobic007G014700 Sobic004G100100--Sobic001G282200 Sobic006G153200 Sobic006G153200 Sobic004G100100--Sobic006G153200 Sobic004G100100--Sobic008G018300 Sobic004G100100--Sobic003G013700 Sobic001G309200 Sobic001G309200 Sobic004G100100--Sobic001G309200
Octagon: transcription factors


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