Gene annotation
Transcriptome id Sobic.002G186500.1
Synonym Sb02g023450
Functional annotation UPF0041 domain containing protein, putative, expressed
UniProt C5XBD1
Pfam PF03650
Panther DB PTHR14154 PTHR14154:SF16
NCBI CDD KOG1590; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0006850; mitochondrial pyruvate transmembrane transport GO:0005743mitochondrial inner membrane


Orthologs (automatic annotation)
TAIR AT5G20090 : Uncharacterised protein family (UPF0041)
RAP-DB (Rice) LOC_Os09g20660.1 : UPF0041 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a008640
Brachypodium KQJ98251
Barley HORVU2Hr1G085120.1 , HORVU2Hr1G085120.2
Wheat TraesCS2A02G349700 , TraesCS2D02G348100
Populus -


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cDNA sequences
Sobic.002G186500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
2 Sobic.001G387200 expressed protein -
3 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
4 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
5 Sobic.004G173700 SLL1 protein, putative, expressed -
6 Sobic.010G231700 expressed protein -
7 Sobic.004G100100 expressed protein -
8 Sobic.006G041800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
9 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
10 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
11 Sobic.003G284100 expressed protein -
12 Sobic.003G016300 SFT2, putative, expressed -
13 Sobic.009G259200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
14 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
15 Sobic.002G246800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
16 Sobic.001G181500 expressed protein -
17 Sobic.002G054700 indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K01695: tryptophan synthase alpha chain
18 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
19 Sobic.010G032600 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
20 Sobic.001G282200 ribosomal protein L35, putative, expressed -


Gene co-expression network
sample Sobic002G186500 Sobic002G186500 Sobic007G012900 Sobic007G012900 Sobic002G186500--Sobic007G012900 Sobic001G387200 Sobic001G387200 Sobic002G186500--Sobic001G387200 Sobic008G018300 Sobic008G018300 Sobic002G186500--Sobic008G018300 Sobic002G255400 Sobic002G255400 Sobic002G186500--Sobic002G255400 Sobic004G173700 Sobic004G173700 Sobic002G186500--Sobic004G173700 Sobic010G231700 Sobic010G231700 Sobic002G186500--Sobic010G231700 Sobic004G100100 Sobic004G100100 Sobic002G186500--Sobic004G100100 Sobic006G041800 Sobic006G041800 Sobic002G186500--Sobic006G041800 Sobic007G119600 Sobic007G119600 Sobic002G186500--Sobic007G119600 Sobic001G181500 Sobic001G181500 Sobic007G012900--Sobic001G181500 Sobic003G276100 Sobic003G276100 Sobic007G012900--Sobic003G276100 Sobic002G401700 Sobic002G401700 Sobic007G012900--Sobic002G401700 Sobic001G008100 Sobic001G008100 Sobic007G012900--Sobic001G008100 Sobic007G012900--Sobic006G041800 Sobic003G148900 Sobic003G148900 Sobic007G012900--Sobic003G148900 Sobic003G135600 Sobic003G135600 Sobic007G012900--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic007G012900--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic007G012900--Sobic002G079700 Sobic003G129900 Sobic003G129900 Sobic001G387200--Sobic003G129900 Sobic004G093600 Sobic004G093600 Sobic001G387200--Sobic004G093600 Sobic006G120900 Sobic006G120900 Sobic001G387200--Sobic006G120900 Sobic001G387200--Sobic004G173700 Sobic001G387200--Sobic008G018300 Sobic004G256700 Sobic004G256700 Sobic001G387200--Sobic004G256700 Sobic001G387200--Sobic002G255400 Sobic002G420600 Sobic002G420600 Sobic001G387200--Sobic002G420600 Sobic005G019100 Sobic005G019100 Sobic001G387200--Sobic005G019100 Sobic008G018300--Sobic002G255400 Sobic002G352200 Sobic002G352200 Sobic008G018300--Sobic002G352200 Sobic008G018300--Sobic001G387200 Sobic008G018300--Sobic004G173700 Sobic008G018300--Sobic002G420600 Sobic003G260600 Sobic003G260600 Sobic008G018300--Sobic003G260600 Sobic001G282200 Sobic001G282200 Sobic008G018300--Sobic001G282200 Sobic008G018300--Sobic003G129900 Sobic003G016300 Sobic003G016300 Sobic008G018300--Sobic003G016300 Sobic002G255400--Sobic003G260600 Sobic003G089100 Sobic003G089100 Sobic002G255400--Sobic003G089100 Sobic007G014700 Sobic007G014700 Sobic002G255400--Sobic007G014700 Sobic002G255400--Sobic008G018300 Sobic002G255400--Sobic002G420600 Sobic003G201500 Sobic003G201500 Sobic002G255400--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic002G255400--Sobic003G013700 Sobic002G255400--Sobic002G352200 Sobic002G255400--Sobic001G387200 Sobic003G137600 Sobic003G137600 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic004G173700--Sobic002G420600 Sobic004G173700--Sobic001G387200 Sobic001G365700 Sobic001G365700 Sobic004G173700--Sobic001G365700 Sobic004G173700--Sobic003G129900 Sobic007G212100 Sobic007G212100 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic004G173700--Sobic008G018300 Sobic010G231700--Sobic002G352200 Sobic002G124900 Sobic002G124900 Sobic010G231700--Sobic002G124900 Sobic009G215300 Sobic009G215300 Sobic010G231700--Sobic009G215300 Sobic003G049800 Sobic003G049800 Sobic010G231700--Sobic003G049800 Sobic002G246800 Sobic002G246800 Sobic010G231700--Sobic002G246800 Sobic003G335300 Sobic003G335300 Sobic010G231700--Sobic003G335300 Sobic010G231700--Sobic002G186500 Sobic007G013900 Sobic007G013900 Sobic010G231700--Sobic007G013900 Sobic010G231700--Sobic003G016300 Sobic004G100100--Sobic003G260600 Sobic004G100100--Sobic002G255400 Sobic003G284100 Sobic003G284100 Sobic004G100100--Sobic003G284100 Sobic004G100100--Sobic007G014700 Sobic004G100100--Sobic001G282200 Sobic006G153200 Sobic006G153200 Sobic004G100100--Sobic006G153200 Sobic004G100100--Sobic008G018300 Sobic004G100100--Sobic003G013700 Sobic001G309200 Sobic001G309200 Sobic004G100100--Sobic001G309200 Sobic006G041800--Sobic007G119600 Sobic006G041800--Sobic001G008100 Sobic006G041800--Sobic003G276100 Sobic001G485300 Sobic001G485300 Sobic006G041800--Sobic001G485300 Sobic002G276800 Sobic002G276800 Sobic006G041800--Sobic002G276800 Sobic006G041800--Sobic007G012900 Sobic003G388700 Sobic003G388700 Sobic006G041800--Sobic003G388700 Sobic001G387800 Sobic001G387800 Sobic006G041800--Sobic001G387800 Sobic006G041800--Sobic002G255400 Sobic009G224400 Sobic009G224400 Sobic007G119600--Sobic009G224400 Sobic007G119600--Sobic009G191400 Sobic007G119600--Sobic006G041800 Sobic001G457000 Sobic001G457000 Sobic007G119600--Sobic001G457000 Sobic001G073600 Sobic001G073600 Sobic007G119600--Sobic001G073600 Sobic007G119600--Sobic002G255400 Sobic003G028200 Sobic003G028200 Sobic007G119600--Sobic003G028200 Sobic007G119600--Sobic003G388700 Sobic007G119600--Sobic003G260600
Octagon: transcription factors


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