Gene annotation
Transcriptome id Sobic.004G011700.2,Sobic.004G011700.1,Sobic.004G011700.3
Synonym BIP2, Sb04g001140, BIP
Functional annotation DnaK family protein, putative, expressed
UniProt A0A194YM42 , A0A194YM75 , A0A194YM64
Pfam PF00012
Panther DB PTHR19375 PTHR19375:SF228
NCBI CDD -
KEGG Orthology K09490; HSPA5, endoplasmic reticulum chaperone BiP
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42020 : Heat shock protein 70 (Hsp 70) family protein
RAP-DB (Rice) LOC_Os02g02410.1 : DnaK family protein, putative, expressed
MaizeGDB (Corn) Zm00025a012583 , Zm00025a035064 , Zm00025a018708
Brachypodium KQJ92901
Barley HORVU5Hr1G113180.1 , HORVU5Hr1G113180.2 , HORVU5Hr1G113180.5 , HORVU5Hr1G113180.4
Wheat TraesCS6B02G058300 , TraesCS5A02G479300 , TraesCS6D02G049100 , TraesCS6A02G042600
Populus PNT42639 , PNT42640 , PNT42641 , PNT42976 , PNT42977


JBrowse

Open New Page


cDNA sequences
Sobic.004G011700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G222200 OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed K09584: PDIA6, protein disulfide-isomerase A6
2 Sobic.008G018200 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
3 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
4 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
5 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
6 Sobic.003G404100 CBS domain-containing protein, putative, expressed -
7 Sobic.001G282200 ribosomal protein L35, putative, expressed -
8 Sobic.008G011800 DTW domain containing protein, putative, expressed -
9 Sobic.004G100100 expressed protein -
10 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
11 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
12 Sobic.007G140600 stromal cell-derived factor 2-like protein precursor, putative, expressed -
13 Sobic.008G050700 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
14 Sobic.008G013200 expressed protein -
15 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
16 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
17 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
18 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
19 Sobic.001G025500 calreticulin precursor, putative, expressed K08057: calreticulin
20 Sobic.004G038500 cyclin-related protein, putative, expressed -


Gene co-expression network
sample Sobic004G011700 Sobic004G011700 Sobic002G222200 Sobic002G222200 Sobic004G011700--Sobic002G222200 Sobic008G018200 Sobic008G018200 Sobic004G011700--Sobic008G018200 Sobic001G309200 Sobic001G309200 Sobic004G011700--Sobic001G309200 Sobic003G201500 Sobic003G201500 Sobic004G011700--Sobic003G201500 Sobic003G308300 Sobic003G308300 Sobic004G011700--Sobic003G308300 Sobic003G404100 Sobic003G404100 Sobic004G011700--Sobic003G404100 Sobic001G282200 Sobic001G282200 Sobic004G011700--Sobic001G282200 Sobic008G011800 Sobic008G011800 Sobic004G011700--Sobic008G011800 Sobic004G100100 Sobic004G100100 Sobic004G011700--Sobic004G100100 Sobic001G073600 Sobic001G073600 Sobic002G222200--Sobic001G073600 Sobic010G002800 Sobic010G002800 Sobic002G222200--Sobic010G002800 Sobic002G222200--Sobic008G018200 Sobic002G222200--Sobic004G011700 Sobic002G232400 Sobic002G232400 Sobic002G222200--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic002G222200--Sobic001G135200 Sobic009G224400 Sobic009G224400 Sobic002G222200--Sobic009G224400 Sobic001G352800 Sobic001G352800 Sobic002G222200--Sobic001G352800 Sobic007G119600 Sobic007G119600 Sobic002G222200--Sobic007G119600 Sobic002G420100 Sobic002G420100 Sobic008G018200--Sobic002G420100 Sobic002G308000 Sobic002G308000 Sobic008G018200--Sobic002G308000 Sobic007G189100 Sobic007G189100 Sobic008G018200--Sobic007G189100 Sobic008G018200--Sobic002G222200 Sobic001G528100 Sobic001G528100 Sobic008G018200--Sobic001G528100 Sobic002G392400 Sobic002G392400 Sobic008G018200--Sobic002G392400 Sobic010G253200 Sobic010G253200 Sobic008G018200--Sobic010G253200 Sobic003G293400 Sobic003G293400 Sobic008G018200--Sobic003G293400 Sobic008G018200--Sobic004G011700 Sobic002G348400 Sobic002G348400 Sobic001G309200--Sobic002G348400 Sobic001G188000 Sobic001G188000 Sobic001G309200--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic001G309200--Sobic003G260600 Sobic001G117900 Sobic001G117900 Sobic001G309200--Sobic001G117900 Sobic009G066200 Sobic009G066200 Sobic001G309200--Sobic009G066200 Sobic001G309200--Sobic002G308000 Sobic001G309200--Sobic002G392400 Sobic010G153400 Sobic010G153400 Sobic001G309200--Sobic010G153400 Sobic007G086600 Sobic007G086600 Sobic001G309200--Sobic007G086600 Sobic003G089100 Sobic003G089100 Sobic003G201500--Sobic003G089100 Sobic003G201500--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic003G201500--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G201500--Sobic002G420600 Sobic002G255400 Sobic002G255400 Sobic003G201500--Sobic002G255400 Sobic001G378800 Sobic001G378800 Sobic003G201500--Sobic001G378800 Sobic006G120900 Sobic006G120900 Sobic003G201500--Sobic006G120900 Sobic001G400000 Sobic001G400000 Sobic003G201500--Sobic001G400000 Sobic004G038500 Sobic004G038500 Sobic003G201500--Sobic004G038500 Sobic003G255700 Sobic003G255700 Sobic003G308300--Sobic003G255700 Sobic008G013200 Sobic008G013200 Sobic003G308300--Sobic008G013200 Sobic009G186700 Sobic009G186700 Sobic003G308300--Sobic009G186700 Sobic007G148400 Sobic007G148400 Sobic003G308300--Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic003G308300--Sobic007G218600 Sobic001G305900 Sobic001G305900 Sobic003G308300--Sobic001G305900 Sobic004G328100 Sobic004G328100 Sobic003G308300--Sobic004G328100 Sobic006G100266 Sobic006G100266 Sobic003G308300--Sobic006G100266 Sobic003G270100 Sobic003G270100 Sobic003G308300--Sobic003G270100 Sobic003G404100--Sobic003G372200 Sobic006G222500 Sobic006G222500 Sobic003G404100--Sobic006G222500 Sobic001G455000 Sobic001G455000 Sobic003G404100--Sobic001G455000 Sobic003G404100--Sobic001G309200 Sobic010G253400 Sobic010G253400 Sobic003G404100--Sobic010G253400 Sobic001G356100 Sobic001G356100 Sobic003G404100--Sobic001G356100 Sobic003G404100--Sobic003G260600 Sobic010G065200 Sobic010G065200 Sobic003G404100--Sobic010G065200 Sobic001G114200 Sobic001G114200 Sobic003G404100--Sobic001G114200 Sobic001G282200--Sobic003G260600 Sobic001G282200--Sobic002G420600 Sobic001G282200--Sobic003G089100 Sobic001G282200--Sobic003G201500 Sobic001G282200--Sobic002G255400 Sobic008G018300 Sobic008G018300 Sobic001G282200--Sobic008G018300 Sobic002G397900 Sobic002G397900 Sobic001G282200--Sobic002G397900 Sobic003G013700 Sobic003G013700 Sobic001G282200--Sobic003G013700 Sobic001G282200--Sobic004G100100 Sobic008G011800--Sobic002G420100 Sobic008G011800--Sobic010G253200 Sobic008G011800--Sobic003G260600 Sobic002G414800 Sobic002G414800 Sobic008G011800--Sobic002G414800 Sobic004G017900 Sobic004G017900 Sobic008G011800--Sobic004G017900 Sobic008G011800--Sobic001G188000 Sobic010G188900 Sobic010G188900 Sobic008G011800--Sobic010G188900 Sobic008G011800--Sobic001G309200 Sobic008G011800--Sobic002G392400 Sobic004G100100--Sobic003G260600 Sobic004G100100--Sobic002G255400 Sobic003G284100 Sobic003G284100 Sobic004G100100--Sobic003G284100 Sobic007G014700 Sobic007G014700 Sobic004G100100--Sobic007G014700 Sobic004G100100--Sobic001G282200 Sobic006G153200 Sobic006G153200 Sobic004G100100--Sobic006G153200 Sobic004G100100--Sobic008G018300 Sobic004G100100--Sobic003G013700 Sobic004G100100--Sobic001G309200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.