Gene annotation
Transcriptome id Sobic.010G101600.1
Synonym Sb10g008850
Functional annotation pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed
UniProt C5Z7L1
Pfam PF00365
Panther DB PTHR13697 PTHR13697:SF26
NCBI CDD KOG2440; Pyrophosphate-dependent phosphofructo-1-kinase
KEGG Orthology K00895; pfp, diphosphate-dependent phosphofructokinase
Gene Ontology GO:0006096; glycolytic process GO:00038726-phosphofructokinase activity


Orthologs (automatic annotation)
TAIR AT1G12000 : Phosphofructokinase family protein
RAP-DB (Rice) LOC_Os06g13810.1 : pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed
MaizeGDB (Corn) Zm00025a049395 , Zm00025a042658
Brachypodium KQK18748
Barley HORVU7Hr1G040550.5 , HORVU7Hr1G040550.9 , HORVU7Hr1G040550.8 , HORVU7Hr1G040550.2 , HORVU7Hr1G040550.1 , HORVU7Hr1G040550.7 , HORVU7Hr1G040550.6 , HORVU7Hr1G040550.4 , HORVU7Hr1G040550.13 , HORVU7Hr1G040550.12 , HORVU7Hr1G040550.11 , HORVU7Hr1G040550.10 , HORVU7Hr1G040550.14
Wheat TraesCS7A02G198200 , TraesCS7A02G198200 , TraesCS7B02G104400 , TraesCS7D02G200800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G101600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G089500 annexin, putative, expressed -
2 Sobic.004G056400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
3 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
4 Sobic.009G111400 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
5 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
6 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
7 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
8 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
9 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
10 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
11 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
12 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
13 Sobic.008G062300 inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
14 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
15 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.006G224000 proton-dependent oligopeptide transport, putative, expressed -
17 Sobic.003G016300 SFT2, putative, expressed -
18 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
19 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase


Gene co-expression network
sample Sobic010G101600 Sobic010G101600 Sobic010G089500 Sobic010G089500 Sobic010G101600--Sobic010G089500 Sobic004G056400 Sobic004G056400 Sobic010G101600--Sobic004G056400 Sobic003G096000 Sobic003G096000 Sobic010G101600--Sobic003G096000 Sobic009G111400 Sobic009G111400 Sobic010G101600--Sobic009G111400 Sobic001G370700 Sobic001G370700 Sobic010G101600--Sobic001G370700 Sobic001G073600 Sobic001G073600 Sobic010G101600--Sobic001G073600 Sobic009G244900 Sobic009G244900 Sobic010G101600--Sobic009G244900 Sobic003G261100 Sobic003G261100 Sobic010G101600--Sobic003G261100 Sobic002G186900 Sobic002G186900 Sobic010G101600--Sobic002G186900 Sobic010G089500--Sobic010G101600 Sobic010G089500--Sobic003G096000 Sobic010G089500--Sobic004G056400 Sobic010G089500--Sobic002G186900 Sobic002G395000 Sobic002G395000 Sobic010G089500--Sobic002G395000 Sobic001G501600 Sobic001G501600 Sobic010G089500--Sobic001G501600 Sobic010G089500--Sobic009G111400 Sobic003G289601 Sobic003G289601 Sobic010G089500--Sobic003G289601 Sobic010G089500--Sobic001G370700 Sobic004G056400--Sobic003G096000 Sobic004G056400--Sobic010G101600 Sobic009G117200 Sobic009G117200 Sobic004G056400--Sobic009G117200 Sobic004G056400--Sobic010G089500 Sobic004G056400--Sobic001G370700 Sobic001G350600 Sobic001G350600 Sobic004G056400--Sobic001G350600 Sobic006G013000 Sobic006G013000 Sobic004G056400--Sobic006G013000 Sobic002G309700 Sobic002G309700 Sobic004G056400--Sobic002G309700 Sobic001G030300 Sobic001G030300 Sobic004G056400--Sobic001G030300 Sobic003G096000--Sobic004G056400 Sobic003G096000--Sobic010G089500 Sobic003G096000--Sobic001G350600 Sobic003G096000--Sobic010G101600 Sobic002G356400 Sobic002G356400 Sobic003G096000--Sobic002G356400 Sobic003G096000--Sobic001G030300 Sobic002G180300 Sobic002G180300 Sobic003G096000--Sobic002G180300 Sobic003G096000--Sobic006G013000 Sobic001G047800 Sobic001G047800 Sobic003G096000--Sobic001G047800 Sobic009G111400--Sobic010G101600 Sobic002G090300 Sobic002G090300 Sobic009G111400--Sobic002G090300 Sobic009G111400--Sobic003G096000 Sobic010G190300 Sobic010G190300 Sobic009G111400--Sobic010G190300 Sobic009G111400--Sobic010G089500 Sobic006G224000 Sobic006G224000 Sobic009G111400--Sobic006G224000 Sobic009G111400--Sobic002G186900 Sobic009G111400--Sobic004G056400 Sobic004G055700 Sobic004G055700 Sobic009G111400--Sobic004G055700 Sobic010G264300 Sobic010G264300 Sobic001G370700--Sobic010G264300 Sobic001G370700--Sobic002G309700 Sobic002G308300 Sobic002G308300 Sobic001G370700--Sobic002G308300 Sobic001G370700--Sobic002G180300 Sobic002G078300 Sobic002G078300 Sobic001G370700--Sobic002G078300 Sobic001G347901 Sobic001G347901 Sobic001G370700--Sobic001G347901 Sobic001G370700--Sobic003G261100 Sobic009G179100 Sobic009G179100 Sobic001G370700--Sobic009G179100 Sobic004G260200 Sobic004G260200 Sobic001G370700--Sobic004G260200 Sobic009G191400 Sobic009G191400 Sobic001G073600--Sobic009G191400 Sobic009G224400 Sobic009G224400 Sobic001G073600--Sobic009G224400 Sobic003G135600 Sobic003G135600 Sobic001G073600--Sobic003G135600 Sobic001G073600--Sobic002G395000 Sobic004G344800 Sobic004G344800 Sobic001G073600--Sobic004G344800 Sobic007G119600 Sobic007G119600 Sobic001G073600--Sobic007G119600 Sobic004G347600 Sobic004G347600 Sobic001G073600--Sobic004G347600 Sobic001G458800 Sobic001G458800 Sobic001G073600--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic001G073600--Sobic004G155100 Sobic007G192500 Sobic007G192500 Sobic009G244900--Sobic007G192500 Sobic002G201700 Sobic002G201700 Sobic009G244900--Sobic002G201700 Sobic004G261800 Sobic004G261800 Sobic009G244900--Sobic004G261800 Sobic009G244900--Sobic010G101600 Sobic002G167100 Sobic002G167100 Sobic009G244900--Sobic002G167100 Sobic002G153000 Sobic002G153000 Sobic009G244900--Sobic002G153000 Sobic001G135200 Sobic001G135200 Sobic009G244900--Sobic001G135200 Sobic010G250300 Sobic010G250300 Sobic009G244900--Sobic010G250300 Sobic004G069400 Sobic004G069400 Sobic009G244900--Sobic004G069400 Sobic003G261100--Sobic001G370700 Sobic002G131600 Sobic002G131600 Sobic003G261100--Sobic002G131600 Sobic001G057300 Sobic001G057300 Sobic003G261100--Sobic001G057300 Sobic006G035900 Sobic006G035900 Sobic003G261100--Sobic006G035900 Sobic009G115700 Sobic009G115700 Sobic003G261100--Sobic009G115700 Sobic007G191600 Sobic007G191600 Sobic003G261100--Sobic007G191600 Sobic003G261100--Sobic004G155100 Sobic001G214900 Sobic001G214900 Sobic003G261100--Sobic001G214900 Sobic003G261100--Sobic001G501600 Sobic009G059500 Sobic009G059500 Sobic002G186900--Sobic009G059500 Sobic002G271300 Sobic002G271300 Sobic002G186900--Sobic002G271300 Sobic002G186900--Sobic003G096000 Sobic002G186900--Sobic010G089500 Sobic002G186900--Sobic010G101600 Sobic002G186900--Sobic004G056400 Sobic001G228200 Sobic001G228200 Sobic002G186900--Sobic001G228200 Sobic006G200000 Sobic006G200000 Sobic002G186900--Sobic006G200000 Sobic007G044400 Sobic007G044400 Sobic002G186900--Sobic007G044400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.