Gene annotation
Transcriptome id Sobic.006G224000.1
Synonym RIC10, Sb06g029330
Functional annotation proton-dependent oligopeptide transport, putative, expressed
UniProt C5YGJ1
Pfam PF00786
Panther DB PTHR23177 PTHR23177:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04900 : ROP-interactive CRIB motif-containing protein 10
RAP-DB (Rice) LOC_Os04g53580.1 : P21-Rho-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a022546
Brachypodium PNT60713
Barley HORVU6Hr1G088830.1 , HORVU6Hr1G088830.2 , HORVU2Hr1G107040.2 , HORVU2Hr1G107040.3 , HORVU2Hr1G107040.1 , HORVU2Hr1G107040.6 , HORVU2Hr1G107040.7 , HORVU2Hr1G107040.4 , HORVU2Hr1G107040.5
Wheat TraesCS2B02G497800 , TraesCS2A02G474300 , TraesCS6B02G416000 , TraesCS2D02G474000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
2 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
3 Sobic.002G227300 expressed protein -
4 Sobic.009G176500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
6 Sobic.009G111400 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
7 Sobic.008G006300 prenylated rab acceptor, putative, expressed -
8 Sobic.002G090300 cytidine deaminase, putative, expressed -
9 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
10 Sobic.010G216400 expressed protein -
11 Sobic.004G239500 RING-H2 finger protein ATL1Q, putative, expressed -
12 Sobic.001G110000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
13 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
14 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
15 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
16 Sobic.004G315000 expressed protein -
17 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
18 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
19 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
20 Sobic.001G282900 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase


Gene co-expression network
sample Sobic006G224000 Sobic006G224000 Sobic003G122200 Sobic003G122200 Sobic006G224000--Sobic003G122200 Sobic004G055700 Sobic004G055700 Sobic006G224000--Sobic004G055700 Sobic002G227300 Sobic002G227300 Sobic006G224000--Sobic002G227300 Sobic009G176500 Sobic009G176500 Sobic006G224000--Sobic009G176500 Sobic010G101600 Sobic010G101600 Sobic006G224000--Sobic010G101600 Sobic009G111400 Sobic009G111400 Sobic006G224000--Sobic009G111400 Sobic008G006300 Sobic008G006300 Sobic006G224000--Sobic008G006300 Sobic002G090300 Sobic002G090300 Sobic006G224000--Sobic002G090300 Sobic003G218400 Sobic003G218400 Sobic006G224000--Sobic003G218400 Sobic001G475500 Sobic001G475500 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic007G150800 Sobic007G150800 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic005G113300 Sobic005G113300 Sobic004G055700--Sobic005G113300 Sobic003G160700 Sobic003G160700 Sobic004G055700--Sobic003G160700 Sobic001G361600 Sobic001G361600 Sobic004G055700--Sobic001G361600 Sobic009G188000 Sobic009G188000 Sobic004G055700--Sobic009G188000 Sobic004G055700--Sobic002G090300 Sobic002G418400 Sobic002G418400 Sobic004G055700--Sobic002G418400 Sobic010G028200 Sobic010G028200 Sobic004G055700--Sobic010G028200 Sobic004G042000 Sobic004G042000 Sobic004G055700--Sobic004G042000 Sobic004G220000 Sobic004G220000 Sobic004G055700--Sobic004G220000 Sobic006G249300 Sobic006G249300 Sobic002G227300--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic002G227300--Sobic001G139100 Sobic009G183400 Sobic009G183400 Sobic002G227300--Sobic009G183400 Sobic008G106700 Sobic008G106700 Sobic002G227300--Sobic008G106700 Sobic005G016700 Sobic005G016700 Sobic002G227300--Sobic005G016700 Sobic009G033300 Sobic009G033300 Sobic002G227300--Sobic009G033300 Sobic009G063900 Sobic009G063900 Sobic002G227300--Sobic009G063900 Sobic008G186100 Sobic008G186100 Sobic002G227300--Sobic008G186100 Sobic002G227300--Sobic002G418400 Sobic004G315000 Sobic004G315000 Sobic009G176500--Sobic004G315000 Sobic010G216400 Sobic010G216400 Sobic009G176500--Sobic010G216400 Sobic009G176500--Sobic006G224000 Sobic001G282900 Sobic001G282900 Sobic009G176500--Sobic001G282900 Sobic004G159400 Sobic004G159400 Sobic009G176500--Sobic004G159400 Sobic009G176500--Sobic002G227300 Sobic002G220100 Sobic002G220100 Sobic009G176500--Sobic002G220100 Sobic001G508466 Sobic001G508466 Sobic009G176500--Sobic001G508466 Sobic009G176500--Sobic008G006300 Sobic010G089500 Sobic010G089500 Sobic010G101600--Sobic010G089500 Sobic004G056400 Sobic004G056400 Sobic010G101600--Sobic004G056400 Sobic003G096000 Sobic003G096000 Sobic010G101600--Sobic003G096000 Sobic010G101600--Sobic009G111400 Sobic001G370700 Sobic001G370700 Sobic010G101600--Sobic001G370700 Sobic001G073600 Sobic001G073600 Sobic010G101600--Sobic001G073600 Sobic009G244900 Sobic009G244900 Sobic010G101600--Sobic009G244900 Sobic003G261100 Sobic003G261100 Sobic010G101600--Sobic003G261100 Sobic002G186900 Sobic002G186900 Sobic010G101600--Sobic002G186900 Sobic009G111400--Sobic010G101600 Sobic009G111400--Sobic002G090300 Sobic009G111400--Sobic003G096000 Sobic010G190300 Sobic010G190300 Sobic009G111400--Sobic010G190300 Sobic009G111400--Sobic010G089500 Sobic009G111400--Sobic006G224000 Sobic009G111400--Sobic002G186900 Sobic009G111400--Sobic004G056400 Sobic009G111400--Sobic004G055700 Sobic001G047800 Sobic001G047800 Sobic008G006300--Sobic001G047800 Sobic008G006300--Sobic002G418400 Sobic008G006300--Sobic004G159400 Sobic002G329900 Sobic002G329900 Sobic008G006300--Sobic002G329900 Sobic008G006300--Sobic003G218400 Sobic001G404800 Sobic001G404800 Sobic008G006300--Sobic001G404800 Sobic004G232500 Sobic004G232500 Sobic008G006300--Sobic004G232500 Sobic008G006300--Sobic002G227300 Sobic008G006300--Sobic004G055700 Sobic002G090300--Sobic004G055700 Sobic002G090300--Sobic004G042000 Sobic003G152200 Sobic003G152200 Sobic002G090300--Sobic003G152200 Sobic006G197100 Sobic006G197100 Sobic002G090300--Sobic006G197100 Sobic004G239500 Sobic004G239500 Sobic002G090300--Sobic004G239500 Sobic002G003800 Sobic002G003800 Sobic002G090300--Sobic002G003800 Sobic002G001700 Sobic002G001700 Sobic002G090300--Sobic002G001700 Sobic004G024100 Sobic004G024100 Sobic002G090300--Sobic004G024100 Sobic001G264000 Sobic001G264000 Sobic002G090300--Sobic001G264000 Sobic003G218400--Sobic001G047800 Sobic004G260200 Sobic004G260200 Sobic003G218400--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic003G218400--Sobic002G309700 Sobic003G218400--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic003G218400--Sobic003G215700 Sobic003G218400--Sobic001G404800 Sobic007G013900 Sobic007G013900 Sobic003G218400--Sobic007G013900 Sobic004G170400 Sobic004G170400 Sobic003G218400--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic003G218400--Sobic001G074700
Octagon: transcription factors


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