Gene annotation
Transcriptome id Sobic.001G282900.1
Synonym CCT2, ATCCT2, Sb01g027830
Functional annotation cytidylyltransferase domain containing protein, expressed
UniProt C5WQN4
Pfam PF01467
Panther DB PTHR10739 PTHR10739:SF30
NCBI CDD -
KEGG Orthology K00968; choline-phosphate cytidylyltransferase
Gene Ontology GO:0009058; biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G15130 : phosphorylcholine cytidylyltransferase2
RAP-DB (Rice) LOC_Os10g42790.1 : cytidylyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003560
Brachypodium KQJ97990
Barley HORVU1Hr1G051150.28 , HORVU1Hr1G051150.26 , HORVU1Hr1G051150.27 , HORVU1Hr1G051150.25
Wheat TraesCS1D02G200100 , TraesCS1D02G200100 , TraesCS1D02G200100 , TraesCS1B02G211200 , TraesCS1B02G211200 , TraesCS1A02G196600
Populus -


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cDNA sequences
Sobic.001G282900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G315000 expressed protein -
2 Sobic.009G176500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.010G216400 expressed protein -
4 Sobic.002G183400 heavy metal-associated domain containing protein, expressed -
5 Sobic.002G220100 expressed protein -
6 Sobic.008G006300 prenylated rab acceptor, putative, expressed -
7 Sobic.004G123000 expressed protein -
8 Sobic.006G224000 proton-dependent oligopeptide transport, putative, expressed -
9 Sobic.003G016300 SFT2, putative, expressed -
10 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
11 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
12 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
13 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
14 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
15 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
16 Sobic.001G197000 dehydration response related protein, putative, expressed -
17 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
18 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
19 Sobic.009G215300 fiber protein Fb11, putative, expressed -
20 Sobic.001G038000 histidine acid phosphatase, putative, expressed K03103: multiple inositol-polyphosphate phosphatase / 2,3-bisphosphoglycerate 3-phosphatase


Gene co-expression network
sample Sobic001G282900 Sobic001G282900 Sobic004G315000 Sobic004G315000 Sobic001G282900--Sobic004G315000 Sobic009G176500 Sobic009G176500 Sobic001G282900--Sobic009G176500 Sobic010G216400 Sobic010G216400 Sobic001G282900--Sobic010G216400 Sobic002G183400 Sobic002G183400 Sobic001G282900--Sobic002G183400 Sobic002G220100 Sobic002G220100 Sobic001G282900--Sobic002G220100 Sobic008G006300 Sobic008G006300 Sobic001G282900--Sobic008G006300 Sobic004G123000 Sobic004G123000 Sobic001G282900--Sobic004G123000 Sobic006G224000 Sobic006G224000 Sobic001G282900--Sobic006G224000 Sobic003G016300 Sobic003G016300 Sobic001G282900--Sobic003G016300 Sobic004G315000--Sobic009G176500 Sobic004G315000--Sobic001G282900 Sobic002G379200 Sobic002G379200 Sobic004G315000--Sobic002G379200 Sobic004G315000--Sobic010G216400 Sobic002G227300 Sobic002G227300 Sobic004G315000--Sobic002G227300 Sobic009G186600 Sobic009G186600 Sobic004G315000--Sobic009G186600 Sobic001G533400 Sobic001G533400 Sobic004G315000--Sobic001G533400 Sobic004G315000--Sobic006G224000 Sobic004G315000--Sobic002G183400 Sobic009G176500--Sobic004G315000 Sobic009G176500--Sobic010G216400 Sobic009G176500--Sobic006G224000 Sobic009G176500--Sobic001G282900 Sobic004G159400 Sobic004G159400 Sobic009G176500--Sobic004G159400 Sobic009G176500--Sobic002G227300 Sobic009G176500--Sobic002G220100 Sobic001G508466 Sobic001G508466 Sobic009G176500--Sobic001G508466 Sobic009G176500--Sobic008G006300 Sobic001G365700 Sobic001G365700 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic004G232500 Sobic004G232500 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic003G335300 Sobic003G335300 Sobic010G216400--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic010G216400--Sobic004G173700 Sobic001G482800 Sobic001G482800 Sobic010G216400--Sobic001G482800 Sobic004G228700 Sobic004G228700 Sobic002G183400--Sobic004G228700 Sobic008G129000 Sobic008G129000 Sobic002G183400--Sobic008G129000 Sobic001G437000 Sobic001G437000 Sobic002G183400--Sobic001G437000 Sobic002G183400--Sobic001G282900 Sobic001G513300 Sobic001G513300 Sobic002G183400--Sobic001G513300 Sobic010G028200 Sobic010G028200 Sobic002G183400--Sobic010G028200 Sobic002G362000 Sobic002G362000 Sobic002G183400--Sobic002G362000 Sobic002G136700 Sobic002G136700 Sobic002G183400--Sobic002G136700 Sobic002G183400--Sobic004G123000 Sobic002G220100--Sobic001G282900 Sobic002G220100--Sobic009G176500 Sobic002G220100--Sobic004G315000 Sobic005G033100 Sobic005G033100 Sobic002G220100--Sobic005G033100 Sobic002G220100--Sobic010G216400 Sobic002G329900 Sobic002G329900 Sobic002G220100--Sobic002G329900 Sobic002G173200 Sobic002G173200 Sobic002G220100--Sobic002G173200 Sobic001G047800 Sobic001G047800 Sobic002G220100--Sobic001G047800 Sobic003G296800 Sobic003G296800 Sobic002G220100--Sobic003G296800 Sobic008G006300--Sobic001G047800 Sobic002G418400 Sobic002G418400 Sobic008G006300--Sobic002G418400 Sobic008G006300--Sobic004G159400 Sobic008G006300--Sobic002G329900 Sobic003G218400 Sobic003G218400 Sobic008G006300--Sobic003G218400 Sobic001G404800 Sobic001G404800 Sobic008G006300--Sobic001G404800 Sobic008G006300--Sobic004G232500 Sobic008G006300--Sobic002G227300 Sobic004G055700 Sobic004G055700 Sobic008G006300--Sobic004G055700 Sobic009G054000 Sobic009G054000 Sobic004G123000--Sobic009G054000 Sobic006G239300 Sobic006G239300 Sobic004G123000--Sobic006G239300 Sobic001G350600 Sobic001G350600 Sobic004G123000--Sobic001G350600 Sobic003G209000 Sobic003G209000 Sobic004G123000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic004G123000--Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic004G123000--Sobic006G013000 Sobic003G155400 Sobic003G155400 Sobic004G123000--Sobic003G155400 Sobic004G159000 Sobic004G159000 Sobic004G123000--Sobic004G159000 Sobic004G123000--Sobic001G404800 Sobic003G122200 Sobic003G122200 Sobic006G224000--Sobic003G122200 Sobic006G224000--Sobic004G055700 Sobic006G224000--Sobic002G227300 Sobic006G224000--Sobic009G176500 Sobic010G101600 Sobic010G101600 Sobic006G224000--Sobic010G101600 Sobic009G111400 Sobic009G111400 Sobic006G224000--Sobic009G111400 Sobic006G224000--Sobic008G006300 Sobic002G090300 Sobic002G090300 Sobic006G224000--Sobic002G090300 Sobic006G224000--Sobic003G218400 Sobic002G352200 Sobic002G352200 Sobic003G016300--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic003G016300--Sobic002G217500 Sobic001G192700 Sobic001G192700 Sobic003G016300--Sobic001G192700 Sobic001G219800 Sobic001G219800 Sobic003G016300--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic003G016300--Sobic008G018300 Sobic006G203900 Sobic006G203900 Sobic003G016300--Sobic006G203900 Sobic002G255400 Sobic002G255400 Sobic003G016300--Sobic002G255400 Sobic009G211900 Sobic009G211900 Sobic003G016300--Sobic009G211900 Sobic002G420600 Sobic002G420600 Sobic003G016300--Sobic002G420600
Octagon: transcription factors


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